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- % This script gives an overview of all the analysis step necessary to
- % recreate the figures and stats of Klink et al. (2017) Neuron
- % http://dx.doi.org/10.1016/j.neuron.2017.05.033
- %% Add function folders -------------------------------------------------
- fld.scripts = pwd;
- addpath(genpath('FUNCTIONS'));
- cd ../
- fld.project = pwd;
- cd(fld.scripts);
- %% Specify more folder paths --------------------------------------------
- fld.data = fullfile(fld.project,'DATA');
- fld.figs = fullfile(fld.project,'FIGURES'); mkdir(fld.figs);
- %% Figures Feedforward --------------------------------------------------
- % this generates a number of figure panels related to feedforward effects
- close all; clc;
- % load
- load(fullfile(fld.data,'V1MS_CAC.mat'));
- save_figs = true;
- % generate figures
- FF_FIGURES;
- % close figures
- close all;
- %% Figures Feedback -----------------------------------------------------
- % this generates a number of figure panels related to feedback effects
- close all; clc;
- % load
- load(fullfile(fld.data,'V4MS_CAC.mat'));
- save_figs = true;
- % generate figures
- FB_FIGURES;
- % close figures
- close all;
- %% Figures Figure-Ground ------------------------------------------------
- % this generates a number of figure panels related to fig-gnd effects
- close all; clc;
- save_figs = true;
- % generate figures
- FG_FIGURES;
- % close figures
- close all hidden;
- % Suppl figure 6
- FG_spikes_ms5p;
- % close figures
- close all hidden;
- %% Stratification analysis ----------------------------------------------
- % this generates a number of figure panels related to stratification
- close all; clc;
- save_figs = true;
- % generate figures
- STRAT_FIGURES;
- % close figures
- close all hidden;
- %% V1V1 analysis --------------------------------------------------------
- % this generates a number of figure panels related to interareal V1-MS
- close all; clc;
- save_figs = true;
- % generate figures
- V1V1_spikes_ms1p;
- % close figures
- close all hidden;
- %% Eye Movement analysis ------------------------------------------------
- % This compares microsaccade amplitude and frequency between MS and no-MS
- close all; clc;
- save_figs = true;
- % generate figures
- SACCADE_Analysis;
- % close figures
- close all hidden;
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