Browse Source

added stuff

Saksham Sharda 2 years ago
parent
commit
58ae6143e1

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.DS_Store

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+.git/annex/objects/JF/8V/MD5E-s6148--7f31e1f187f2c33bf909efc4b2b9a1b9/MD5E-s6148--7f31e1f187f2c33bf909efc4b2b9a1b9

+ 5 - 2
.gitattributes

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+LICENSE* annex.largefiles=nothing
+README* annex.largefiles=nothing
+config* annex.largefiles=nothing
+
 * annex.backend=MD5E
-**/.git* annex.largefiles=nothing
-* annex.largefiles=((mimeencoding=binary)and(largerthan=0))
+**/.git* annex.largefiles=nothing

+ 1 - 0
.gitignore

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+.DS_Store?

+ 80 - 0
DLC/config.yaml

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+    # Project definitions (do not edit)
+Task: openfield
+scorer: Pranav
+date: Aug20
+multianimalproject: false
+identity:
+
+    # Project path (change when moving around)
+project_path: /Users/sakshamsharda/Documents/NWB/GIN/behavior_testing_data/DLC
+
+    # Annotation data set configuration (and individual video cropping parameters)
+video_sets:
+  /Data/openfield-Pranav-2018-08-20/videos/m1s1.mp4:
+    crop: 0, 640, 0, 480
+  /Data/openfield-Pranav-2018-08-20/videos/m1s2.mp4:
+    crop: 0, 640, 0, 480
+  /Data/openfield-Pranav-2018-08-20/videos/m2s1.mp4:
+    crop: 0, 640, 0, 480
+  /Data/openfield-Pranav-2018-08-20/videos/m3s1.mp4:
+    crop: 0, 640, 0, 480
+  /Data/openfield-Pranav-2018-08-20/videos/m3s2.mp4:
+    crop: 0, 640, 0, 480
+  /Data/openfield-Pranav-2018-08-20/videos/m4s1.mp4:
+    crop: 0, 640, 0, 480
+  /Data/openfield-Pranav-2018-08-20/videos/m5s1.mp4:
+    crop: 0, 800, 0, 800
+  /Data/openfield-Pranav-2018-08-20/videos/m6s1.mp4:
+    crop: 0, 800, 0, 800
+  /Data/openfield-Pranav-2018-08-20/videos/m6s2.mp4:
+    crop: 0, 800, 0, 800
+  /Data/openfield-Pranav-2018-08-20/videos/m7s1.mp4:
+    crop: 0, 800, 0, 800
+  /Data/openfield-Pranav-2018-08-20/videos/m7s2.mp4:
+    crop: 0, 800, 0, 800
+  /Data/openfield-Pranav-2018-08-20/videos/m7s3.mp4:
+    crop: 0, 800, 0, 800
+  /Data/openfield-Pranav-2018-08-20/videos/m8s1.mp4:
+    crop: 0, 800, 0, 800
+
+bodyparts:
+- snout
+- leftear
+- rightear
+- tailbase
+
+start: 0
+stop: 1
+numframes2pick: 20
+
+    # Plotting configuration
+skeleton: []
+skeleton_color: black
+pcutoff: 0.4
+dotsize: 8
+alphavalue: 0.7
+colormap: jet
+
+    # Training,Evaluation and Analysis configuration
+TrainingFraction:
+- 0.95
+iteration: 1
+default_net_type: resnet_50
+default_augmenter: default
+snapshotindex: -1
+batch_size: 1
+
+    # Cropping Parameters (for analysis and outlier frame detection)
+cropping: false
+    #if cropping is true for analysis, then set the values here:
+x1: 0
+x2: 640
+y1: 277
+y2: 624
+
+    # Refinement configuration (parameters from annotation dataset configuration also relevant in this stage)
+corner2move2:
+- 50
+- 50
+move2corner: true
+croppedtraining:

+ 1 - 0
DLC/m3v1mp4DLC_resnet50_openfieldAug20shuffle1_30000.h5

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+../.git/annex/objects/Qp/Z7/MD5E-s282379--4e653255ba65fadf739a991f5492a5e2.h5/MD5E-s282379--4e653255ba65fadf739a991f5492a5e2.h5

+ 1 - 0
videos/.DS_Store

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+../.git/annex/objects/qK/0j/MD5E-s6148--8062933fe9dfdcabb6099453d55b6665/MD5E-s6148--8062933fe9dfdcabb6099453d55b6665

+ 1 - 0
videos/CFR/video_avi.avi

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+../../.git/annex/objects/mk/Wv/MD5E-s765624--22e4abbb31b71789d9553d78af24d1ba.avi/MD5E-s765624--22e4abbb31b71789d9553d78af24d1ba.avi

+ 1 - 0
videos/CFR/video_flv.flv

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+../../.git/annex/objects/PG/6p/MD5E-s88526--a465ffd02e371d2eac26c7cd01a12995.flv/MD5E-s88526--a465ffd02e371d2eac26c7cd01a12995.flv

+ 1 - 0
videos/CFR/video_mov.mov

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+../../.git/annex/objects/K5/8k/MD5E-s753851--67a4c24e996c33a6fefbed118d16fe36.mov/MD5E-s753851--67a4c24e996c33a6fefbed118d16fe36.mov

+ 1 - 0
videos/CFR/video_mp4.mp4

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+../../.git/annex/objects/5X/79/MD5E-s633348--33ba2cc01ea2007771db09688332cd54.mp4/MD5E-s633348--33ba2cc01ea2007771db09688332cd54.mp4

+ 1 - 0
videos/CFR/video_wmv.wmv

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+../../.git/annex/objects/1W/4Z/MD5E-s762267--eea21e81b533f215f0582ac3ae83a6c3.wmv/MD5E-s762267--eea21e81b533f215f0582ac3ae83a6c3.wmv