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- authors:
- -
- firstname: "Frederik Filip"
- lastname: "Stæger"
- affiliation: "Center for Translational Neuromedicine, Faculty of Health and Medical Sciences, University of Copenhagen, 2200 Copenhagen, Denmark"
- id: "ORCID:0000-0002-2295-8637"
- -
- firstname: "Kristian"
- lastname: "Mortensen"
- affiliation: "Center for Translational Neuromedicine, Faculty of Health and Medical Sciences, University of Copenhagen, 2200 Copenhagen, Denmark"
- id: "ORCID:0000-0003-3726-0781"
- -
- firstname: "Louis"
- affiliation: "Center for Translational Neuromedicine, Faculty of Health and Medical Sciences, University of Copenhagen, 2200 Copenhagen, Denmark"
- lastname: "Kaufmann"
- -
- firstname: "Hajime"
- affiliation: "Center for Translational Neuromedicine, Faculty of Health and Medical Sciences, University of Copenhagen, 2200 Copenhagen, Denmark"
- lastname: "Hirase"
- id: "ORCID:0000-0003-3806-6905"
- -
- firstname: "Björn"
- affiliation: "Center for Translational Neuromedicine, Faculty of Health and Medical Sciences, University of Copenhagen, 2200 Copenhagen, Denmark"
- lastname: "Sigurdsson"
- id: "ORCID:0000-0002-7484-7779"
- -
- firstname: "Maiken"
- affiliation: "Center for Translational Neuromedicine, Faculty of Health and Medical Sciences, University of Copenhagen, 2200 Copenhagen, Denmark\nand\nCenter for Translational Neuromedicine, University of Rochester Medical Center, Rochester, NY 14642, USA."
- lastname: "Nedergaard"
- id: "ORCID:0000-0001-6502-6031"
- title: "A three-dimensional, population-based average of the C57BL/6 mouse brain from DAPI-stained coronal slices"
- description: "The full data set and pipeline for constructing the three-dimensional, population-based average of the C57BL/6 mouse brain form DAPI-stained coronal slices.\nThis repository also contains a python implementation of automatic coronal brain slice segmentation.\nThe data set constitutes of all the raw slice images (.tif) in full resolution, the pre-processed version (.nii), the individually reconstructed brain volumes, and the final population-based average."
- keywords:
- - Neuroscience
- - Mouse brain template
- - C57BL/6 brain template
- - DAPI
- - Population-based average
- - Automatic segementation
- references:
- -
- reftype: "IsDescribedBy"
- name: "A three-dimensional, population-based average of the C57BL/6 mouse brain from DAPI-stained coronal slices"
- license:
- name: "Creative Commons CC0 1.0 Public Domain Dedication"
- url: "https://creativecommons.org/publicdomain/zero/1.0/"
- resourcetype: Dataset
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