testdata_AIDA/proc_data/sub-SPsV1c1m5/ses-P5/anat/registration.log

Notice: '/data/testdata_AIDA/proc_data/sub-SPsV1c1m5/ses-P5/anat/sub-SPsV1c1m5_ses-P5_T2wBiasBet.nii.gz' has no defined reference (stroke) mask - will proceed without.
Output of reg_aladin -ref /data/testdata_AIDA/proc_data/sub-SPsV1c1m5/ses-P5/anat/sub-SPsV1c1m5_ses-P5_T2wBiasBet.nii.gz -flo /aida/lib/NP_template_sc0.nii.gz -res /data/testdata_AIDA/proc_data/sub-SPsV1c1m5/ses-P5/anat/sub-SPsV1c1m5_ses-P5_T2wBiasBet_TemplateAff.nii.gz -aff /data/testdata_AIDA/proc_data/sub-SPsV1c1m5/ses-P5/anat/sub-SPsV1c1m5_ses-P5_T2wBiasBetMatrixAff.txt:

[NiftyReg ALADIN] Command line:
	 reg_aladin -ref /data/testdata_AIDA/proc_data/sub-SPsV1c1m5/ses-P5/anat/sub-SPsV1c1m5_ses-P5_T2wBiasBet.nii.gz -flo /aida/lib/NP_template_sc0.nii.gz -res /data/testdata_AIDA/proc_data/sub-SPsV1c1m5/ses-P5/anat/sub-SPsV1c1m5_ses-P5_T2wBiasBet_TemplateAff.nii.gz -aff /data/testdata_AIDA/proc_data/sub-SPsV1c1m5/ses-P5/anat/sub-SPsV1c1m5_ses-P5_T2wBiasBetMatrixAff.txt

[reg_aladin_sym] Parameters
[reg_aladin_sym] Reference image name: /data/testdata_AIDA/proc_data/sub-SPsV1c1m5/ses-P5/anat/sub-SPsV1c1m5_ses-P5_T2wBiasBet.nii.gz
[reg_aladin_sym] 	256x256x48 voxels
[reg_aladin_sym] 	0.0683594x0.0683594x0.3 mm
[reg_aladin_sym] Floating image name: /aida/lib/NP_template_sc0.nii.gz
[reg_aladin_sym] 	228x160x264 voxels
[reg_aladin_sym] 	0.05x0.05x0.05 mm
[reg_aladin_sym] Maximum iteration number: 5 (10 during the first level)
[reg_aladin_sym] Percentage of blocks: 50 %
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
[reg_aladin_sym] Current level 1 / 3
[reg_aladin_sym] reference image size: 	64x64x48 voxels	0.273438x0.273438x0.3 mm
[reg_aladin_sym] floating image size: 	57x40x66 voxels	0.2x0.2x0.2 mm
[reg_aladin_sym] Block size = [4 4 4]
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
[reg_aladin_sym] Forward Block number = [16 16 12]
[reg_aladin_sym] Backward Block number = [15 10 17]
[reg_aladin_sym] Initial forward transformation matrix::
1	0	0	-8.725
0	1	0	-11.325
0	0	1	-4.575
0	0	0	1
[reg_aladin_sym] Initial backward transformation matrix::
1	0	0	8.725
0	1	0	11.325
0	0	1	4.575
0	0	0	1
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
[reg_aladin_sym] Final forward transformation matrix::
1.02935	0.00206261	0.0686223	-9.06903
-0.0474211	1.12891	0.213697	-13.6113
-0.055378	-0.175079	0.965586	-1.9641
0	0	0	1
[reg_aladin_sym] Final backward transformation matrix::
0.967378	-0.0120172	-0.0660901	8.4798
0.0291335	0.856054	-0.191527	11.54
0.0607633	0.154529	0.997123	4.61285
0	0	0	1
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
[reg_aladin_sym] Current level 2 / 3
[reg_aladin_sym] reference image size: 	128x128x48 voxels	0.136719x0.136719x0.3 mm
[reg_aladin_sym] floating image size: 	114x80x132 voxels	0.1x0.1x0.1 mm
[reg_aladin_sym] Block size = [4 4 4]
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
[reg_aladin_sym] Forward Block number = [32 32 12]
[reg_aladin_sym] Backward Block number = [29 20 33]
[reg_aladin_sym] Initial forward transformation matrix::
1.02935	0.00206261	0.0686223	-9.06903
-0.0474211	1.12891	0.213697	-13.6113
-0.055378	-0.175079	0.965586	-1.9641
0	0	0	1
[reg_aladin_sym] Initial backward transformation matrix::
0.967378	-0.0120172	-0.0660901	8.4798
0.0291335	0.856054	-0.191527	11.54
0.0607633	0.154529	0.997123	4.61285
0	0	0	1
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
[reg_aladin_sym] Final forward transformation matrix::
1.02842	0.00947856	0.0743097	-9.14283
-0.0430507	1.12612	0.220481	-13.6559
-0.0558384	-0.186848	0.973415	-1.89702
0	0	0	1
[reg_aladin_sym] Final backward transformation matrix::
0.967777	-0.0196649	-0.0694251	8.44798
0.0251818	0.855329	-0.195657	11.5394
0.0603487	0.163053	0.985772	4.64842
0	0	0	1
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
[reg_aladin_sym] Current level 3 / 3
[reg_aladin_sym] reference image size: 	256x256x48 voxels	0.0683594x0.0683594x0.3 mm
[reg_aladin_sym] floating image size: 	228x160x264 voxels	0.05x0.05x0.05 mm
[reg_aladin_sym] Block size = [4 4 4]
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
[reg_aladin_sym] Forward Block number = [64 64 12]
[reg_aladin_sym] Backward Block number = [57 40 66]
[reg_aladin_sym] Initial forward transformation matrix::
1.02842	0.00947856	0.0743097	-9.14283
-0.0430507	1.12612	0.220481	-13.6559
-0.0558384	-0.186848	0.973415	-1.89702
0	0	0	1
[reg_aladin_sym] Initial backward transformation matrix::
0.967777	-0.0196649	-0.0694251	8.44798
0.0251818	0.855329	-0.195657	11.5394
0.0603487	0.163053	0.985772	4.64842
0	0	0	1
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
[reg_aladin_sym] Final forward transformation matrix::
1.02645	0.0152058	0.0672871	-9.14962
-0.0366104	1.12856	0.21574	-13.6943
-0.0553079	-0.175539	0.962028	-1.89183
0	0	0	1
[reg_aladin_sym] Final backward transformation matrix::
0.970042	-0.0228269	-0.0627285	8.44424
0.0201059	0.855746	-0.193312	11.5371
0.0594373	0.154834	1.00059	4.55712
0	0	0	1
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Registration Performed in 3 min 8 sec
Have a good day !

Output of reg_aladin -ref /aida/lib/average_template_50.nii.gz -flo /data/testdata_AIDA/proc_data/sub-SPsV1c1m5/ses-P5/anat/sub-SPsV1c1m5_ses-P5_T2wBiasBet.nii.gz -res /data/testdata_AIDA/proc_data/sub-SPsV1c1m5/ses-P5/anat/sub-SPsV1c1m5_ses-P5_T2wBiasBet_IncidenceData.nii.gz -aff /data/testdata_AIDA/proc_data/sub-SPsV1c1m5/ses-P5/anat/sub-SPsV1c1m5_ses-P5_T2wBiasBetMatrixInv.txt:

[NiftyReg ALADIN] Command line:
	 reg_aladin -ref /aida/lib/average_template_50.nii.gz -flo /data/testdata_AIDA/proc_data/sub-SPsV1c1m5/ses-P5/anat/sub-SPsV1c1m5_ses-P5_T2wBiasBet.nii.gz -res /data/testdata_AIDA/proc_data/sub-SPsV1c1m5/ses-P5/anat/sub-SPsV1c1m5_ses-P5_T2wBiasBet_IncidenceData.nii.gz -aff /data/testdata_AIDA/proc_data/sub-SPsV1c1m5/ses-P5/anat/sub-SPsV1c1m5_ses-P5_T2wBiasBetMatrixInv.txt

[reg_aladin_sym] Parameters
[reg_aladin_sym] Reference image name: /aida/lib/average_template_50.nii.gz
[reg_aladin_sym] 	228x160x264 voxels
[reg_aladin_sym] 	0.05x0.05x0.05 mm
[reg_aladin_sym] Floating image name: /data/testdata_AIDA/proc_data/sub-SPsV1c1m5/ses-P5/anat/sub-SPsV1c1m5_ses-P5_T2wBiasBet.nii.gz
[reg_aladin_sym] 	256x256x48 voxels
[reg_aladin_sym] 	0.0683594x0.0683594x0.3 mm
[reg_aladin_sym] Maximum iteration number: 5 (10 during the first level)
[reg_aladin_sym] Percentage of blocks: 50 %
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
[reg_aladin_sym] Current level 1 / 3
[reg_aladin_sym] reference image size: 	57x40x66 voxels	0.2x0.2x0.2 mm
[reg_aladin_sym] floating image size: 	64x64x48 voxels	0.273438x0.273438x0.3 mm
[reg_aladin_sym] Block size = [4 4 4]
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
[reg_aladin_sym] Forward Block number = [15 10 17]
[reg_aladin_sym] Backward Block number = [16 16 12]
[reg_aladin_sym] Initial forward transformation matrix::
1	0	0	8.725
0	1	0	11.325
0	0	1	4.575
0	0	0	1
[reg_aladin_sym] Initial backward transformation matrix::
1	0	0	-8.725
0	1	0	-11.325
0	0	1	-4.575
0	0	0	1
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
[reg_aladin_sym] Final forward transformation matrix::
0.992587	-0.0185163	-0.0699796	8.4841
0.0297973	0.883663	-0.199983	11.6706
0.059249	0.187288	0.999002	4.64666
0	0	0	1
[reg_aladin_sym] Final backward transformation matrix::
1.00303	0.00587648	0.071438	-8.91031
-0.0453604	1.08533	0.214086	-13.2763
-0.0509837	-0.203821	0.956626	-1.63386
0	0	0	1
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
[reg_aladin_sym] Current level 2 / 3
[reg_aladin_sym] reference image size: 	114x80x132 voxels	0.1x0.1x0.1 mm
[reg_aladin_sym] floating image size: 	128x128x48 voxels	0.136719x0.136719x0.3 mm
[reg_aladin_sym] Block size = [4 4 4]
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
[reg_aladin_sym] Forward Block number = [29 20 33]
[reg_aladin_sym] Backward Block number = [32 32 12]
[reg_aladin_sym] Initial forward transformation matrix::
0.992587	-0.0185163	-0.0699796	8.4841
0.0297973	0.883663	-0.199983	11.6706
0.059249	0.187288	0.999002	4.64666
0	0	0	1
[reg_aladin_sym] Initial backward transformation matrix::
1.00303	0.00587648	0.071438	-8.91031
-0.0453604	1.08533	0.214086	-13.2763
-0.0509837	-0.203821	0.956626	-1.63386
0	0	0	1
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
[reg_aladin_sym] Final forward transformation matrix::
0.986474	-0.0164585	-0.0707278	8.46651
0.0227212	0.880497	-0.195242	11.6667
0.057927	0.187135	0.980571	4.68773
0	0	0	1
[reg_aladin_sym] Final backward transformation matrix::
1.00932	0.00325592	0.07345	-8.92775
-0.0376728	1.08949	0.214212	-13.396
-0.052436	-0.208114	0.974594	-1.69667
0	0	0	1
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
[reg_aladin_sym] Current level 3 / 3
[reg_aladin_sym] reference image size: 	228x160x264 voxels	0.05x0.05x0.05 mm
[reg_aladin_sym] floating image size: 	256x256x48 voxels	0.0683594x0.0683594x0.3 mm
[reg_aladin_sym] Block size = [4 4 4]
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
[reg_aladin_sym] Forward Block number = [57 40 66]
[reg_aladin_sym] Backward Block number = [64 64 12]
[reg_aladin_sym] Initial forward transformation matrix::
0.986474	-0.0164585	-0.0707278	8.46651
0.0227212	0.880497	-0.195242	11.6667
0.057927	0.187135	0.980571	4.68773
0	0	0	1
[reg_aladin_sym] Initial backward transformation matrix::
1.00932	0.00325592	0.07345	-8.92775
-0.0376728	1.08949	0.214212	-13.396
-0.052436	-0.208114	0.974594	-1.69667
0	0	0	1
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
[reg_aladin_sym] Final forward transformation matrix::
0.985703	-0.0301585	-0.0667832	8.42085
0.0210643	0.881169	-0.183172	11.6368
0.0521145	0.171546	1.00008	4.62341
0	0	0	1
[reg_aladin_sym] Final backward transformation matrix::
1.01029	0.0207054	0.0712579	-9.07793
-0.0338867	1.09509	0.198311	-13.3748
-0.0468342	-0.188923	0.962193	-1.85578
0	0	0	1
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Registration Performed in 2 min 23 sec
Have a good day !

Output of reg_f3d -ref /data/testdata_AIDA/proc_data/sub-SPsV1c1m5/ses-P5/anat/sub-SPsV1c1m5_ses-P5_T2wBiasBet.nii.gz -flo /aida/lib/NP_template_sc0.nii.gz -sx 3 -sy 3 -sz 3 -jl 0.3 -res /data/testdata_AIDA/proc_data/sub-SPsV1c1m5/ses-P5/anat/sub-SPsV1c1m5_ses-P5_T2wBiasBet_Template.nii.gz -cpp /data/testdata_AIDA/proc_data/sub-SPsV1c1m5/ses-P5/anat/sub-SPsV1c1m5_ses-P5_T2wBiasBetMatrixBspline.nii -aff /data/testdata_AIDA/proc_data/sub-SPsV1c1m5/ses-P5/anat/sub-SPsV1c1m5_ses-P5_T2wBiasBetMatrixAff.txt:

[NiftyReg F3D] Command line:
	 reg_f3d -ref /data/testdata_AIDA/proc_data/sub-SPsV1c1m5/ses-P5/anat/sub-SPsV1c1m5_ses-P5_T2wBiasBet.nii.gz -flo /aida/lib/NP_template_sc0.nii.gz -sx 3 -sy 3 -sz 3 -jl 0.3 -res /data/testdata_AIDA/proc_data/sub-SPsV1c1m5/ses-P5/anat/sub-SPsV1c1m5_ses-P5_T2wBiasBet_Template.nii.gz -cpp /data/testdata_AIDA/proc_data/sub-SPsV1c1m5/ses-P5/anat/sub-SPsV1c1m5_ses-P5_T2wBiasBetMatrixBspline.nii -aff /data/testdata_AIDA/proc_data/sub-SPsV1c1m5/ses-P5/anat/sub-SPsV1c1m5_ses-P5_T2wBiasBetMatrixAff.txt

[NiftyReg F3D] OpenMP is used with 8 thread(s)
[NiftyReg F3D] **************************************************
[NiftyReg F3D] INPUT PARAMETERS
[NiftyReg F3D] **************************************************
[NiftyReg F3D] Reference image:
[NiftyReg F3D] 	* name: /data/testdata_AIDA/proc_data/sub-SPsV1c1m5/ses-P5/anat/sub-SPsV1c1m5_ses-P5_T2wBiasBet.nii.gz
[NiftyReg F3D] 	* image dimension: 256 x 256 x 48 x 1
[NiftyReg F3D] 	* image spacing: 0.0683594 x 0.0683594 x 0.3 mm
[NiftyReg F3D] 	* intensity threshold for timepoint 1/1: [-3.4e+38 3.4e+38]
[NiftyReg F3D] 	* gaussian smoothing sigma: 0
[NiftyReg F3D]
[NiftyReg F3D] Floating image:
[NiftyReg F3D] 	* name: /aida/lib/NP_template_sc0.nii.gz
[NiftyReg F3D] 	* image dimension: 228 x 160 x 264 x 1
[NiftyReg F3D] 	* image spacing: 0.05 x 0.05 x 0.05 mm
[NiftyReg F3D] 	* intensity threshold for timepoint 1/1: [-3.4e+38 3.4e+38]
[NiftyReg F3D] 	* gaussian smoothing sigma: 0
[NiftyReg F3D]
[NiftyReg F3D] Warped image padding value: nan
[NiftyReg F3D]
[NiftyReg F3D] Level number: 3
[NiftyReg F3D]
[NiftyReg F3D] Maximum iteration number per level: 300
[NiftyReg F3D]
[NiftyReg F3D] Final spacing in mm: 3 3 3
[NiftyReg F3D]
[NiftyReg F3D] The NMI is used as a similarity measure.
[NiftyReg F3D] Similarity measure term weight: 0.695
[NiftyReg F3D]
[NiftyReg F3D] Bending energy penalty term weight: 0.005
[NiftyReg F3D]
[NiftyReg F3D] Linear energy penalty term weights: 0 0
[NiftyReg F3D]
[NiftyReg F3D] L2 norm of the displacement penalty term weights: 0
[NiftyReg F3D]
[NiftyReg F3D] Jacobian-based penalty term weight: 0.3
[NiftyReg F3D] 	* Jacobian-based penalty term is approximated
[NiftyReg F3D] **************************************************
[NiftyReg F3D] Current level: 1 / 3
[NiftyReg F3D] Current reference image
[NiftyReg F3D] 	* image dimension: 64 x 64 x 48 x 1
[NiftyReg F3D] 	* image spacing: 0.273438 x 0.273438 x 0.3 mm
[NiftyReg F3D] Current floating image
[NiftyReg F3D] 	* image dimension: 57 x 40 x 66 x 1
[NiftyReg F3D] 	* image spacing: 0.2 x 0.2 x 0.2 mm
[NiftyReg F3D] Current control point image
[NiftyReg F3D] 	* image dimension: 5 x 5 x 5
[NiftyReg F3D] 	* image spacing: 12 x 12 x 12 mm
[NiftyReg F3D] Initial objective function: 0.784351 = (wSIM)0.790828 - (wBE)1.83879e-15 - (wLE)0 - (wL2)0 - (wJAC)0.00647692
[NiftyReg F3D] [9] Current objective function: 0.785174 = (wSIM)0.791803 - (wBE)8.83e-08 - (wJAC)6.63e-03 [+ 0.3 mm]
[NiftyReg F3D] [17] Current objective function: 0.785174 = (wSIM)0.791803 - (wBE)8.83e-08 - (wJAC)6.63e-03 [+ 0 mm]
[NiftyReg F3D] Current registration level done
[NiftyReg F3D] --------------------------------------------------
[NiftyReg F3D] **************************************************
[NiftyReg F3D] Current level: 2 / 3
[NiftyReg F3D] Current reference image
[NiftyReg F3D] 	* image dimension: 128 x 128 x 48 x 1
[NiftyReg F3D] 	* image spacing: 0.136719 x 0.136719 x 0.3 mm
[NiftyReg F3D] Current floating image
[NiftyReg F3D] 	* image dimension: 114 x 80 x 132 x 1
[NiftyReg F3D] 	* image spacing: 0.1 x 0.1 x 0.1 mm
[NiftyReg F3D] Current control point image
[NiftyReg F3D] 	* image dimension: 6 x 6 x 6
[NiftyReg F3D] 	* image spacing: 6 x 6 x 6 mm
[NiftyReg F3D] Initial objective function: 0.779586 = (wSIM)0.7864 - (wBE)1.69542e-07 - (wLE)0 - (wL2)0 - (wJAC)0.00681433
[NiftyReg F3D] [10] Current objective function: 0.785062 = (wSIM)0.791792 - (wBE)6.25e-07 - (wJAC)6.73e-03 [+ 0.309375 mm]
[NiftyReg F3D] [19] Current objective function: 0.78583 = (wSIM)0.792556 - (wBE)2.42e-06 - (wJAC)6.72e-03 [+ 0.15 mm]
[NiftyReg F3D] [28] Current objective function: 0.787765 = (wSIM)0.794513 - (wBE)2.90e-06 - (wJAC)6.74e-03 [+ 0.160313 mm]
[NiftyReg F3D] [36] Current objective function: 0.787841 = (wSIM)0.794569 - (wBE)4.29e-06 - (wJAC)6.72e-03 [+ 0.0801563 mm]
[NiftyReg F3D] [45] Current objective function: 0.78961 = (wSIM)0.796261 - (wBE)6.69e-06 - (wJAC)6.64e-03 [+ 0.168328 mm]
[NiftyReg F3D] [53] Current objective function: 0.790301 = (wSIM)0.796906 - (wBE)1.15e-05 - (wJAC)6.59e-03 [+ 0.168328 mm]
[NiftyReg F3D] [61] Current objective function: 0.790811 = (wSIM)0.797432 - (wBE)1.51e-05 - (wJAC)6.61e-03 [+ 0.168328 mm]
[NiftyReg F3D] [68] Current objective function: 0.790811 = (wSIM)0.797432 - (wBE)1.51e-05 - (wJAC)6.61e-03 [+ 0 mm]
[NiftyReg F3D] Current registration level done
[NiftyReg F3D] --------------------------------------------------
[NiftyReg F3D] **************************************************
[NiftyReg F3D] Current level: 3 / 3
[NiftyReg F3D] Current reference image
[NiftyReg F3D] 	* image dimension: 256 x 256 x 48 x 1
[NiftyReg F3D] 	* image spacing: 0.0683594 x 0.0683594 x 0.3 mm
[NiftyReg F3D] Current floating image
[NiftyReg F3D] 	* image dimension: 228 x 160 x 264 x 1
[NiftyReg F3D] 	* image spacing: 0.05 x 0.05 x 0.05 mm
[NiftyReg F3D] Current control point image
[NiftyReg F3D] 	* image dimension: 9 x 9 x 8
[NiftyReg F3D] 	* image spacing: 3 x 3 x 3 mm
[NiftyReg F3D] Initial objective function: 0.781975 = (wSIM)0.788792 - (wBE)2.32716e-05 - (wLE)0 - (wL2)0 - (wJAC)0.0067932
[NiftyReg F3D] [9] Current objective function: 0.782326 = (wSIM)0.789142 - (wBE)3.41e-05 - (wJAC)6.78e-03 [+ 0.3 mm]
[NiftyReg F3D] [18] Current objective function: 0.782554 = (wSIM)0.789371 - (wBE)4.75e-05 - (wJAC)6.77e-03 [+ 0.15 mm]
[NiftyReg F3D] [27] Current objective function: 0.785421 = (wSIM)0.792224 - (wBE)6.92e-05 - (wJAC)6.73e-03 [+ 0.315 mm]
[NiftyReg F3D] [35] Current objective function: 0.785421 = (wSIM)0.792224 - (wBE)6.92e-05 - (wJAC)6.73e-03 [+ 0 mm]
[NiftyReg F3D] Current registration level done
[NiftyReg F3D] --------------------------------------------------
[NiftyReg F3D] Registration Performed in 0 min 45 sec
[NiftyReg F3D] Have a good day !

Output of reg_resample -ref /data/testdata_AIDA/proc_data/sub-SPsV1c1m5/ses-P5/anat/sub-SPsV1c1m5_ses-P5_T2wBiasBet.nii.gz -flo /aida/lib/average_template_50.nii.gz -cpp /data/testdata_AIDA/proc_data/sub-SPsV1c1m5/ses-P5/anat/sub-SPsV1c1m5_ses-P5_T2wBiasBetMatrixBspline.nii -res /data/testdata_AIDA/proc_data/sub-SPsV1c1m5/ses-P5/anat/sub-SPsV1c1m5_ses-P5_T2wBiasBet_TemplateAllen.nii.gz:

* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
Command line:
 reg_resample -ref /data/testdata_AIDA/proc_data/sub-SPsV1c1m5/ses-P5/anat/sub-SPsV1c1m5_ses-P5_T2wBiasBet.nii.gz -flo /aida/lib/average_template_50.nii.gz -cpp /data/testdata_AIDA/proc_data/sub-SPsV1c1m5/ses-P5/anat/sub-SPsV1c1m5_ses-P5_T2wBiasBetMatrixBspline.nii -res /data/testdata_AIDA/proc_data/sub-SPsV1c1m5/ses-P5/anat/sub-SPsV1c1m5_ses-P5_T2wBiasBet_TemplateAllen.nii.gz

Parameters
Reference image name: /data/testdata_AIDA/proc_data/sub-SPsV1c1m5/ses-P5/anat/sub-SPsV1c1m5_ses-P5_T2wBiasBet.nii.gz
	256x256x48 voxels, 1 volumes
	0.0683594x0.0683594x0.3 mm
Floating image name: /aida/lib/average_template_50.nii.gz
	228x160x264 voxels, 1 volumes
	0.05x0.05x0.05 mm
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *

[NiftyReg] Resampled image has been saved: /data/testdata_AIDA/proc_data/sub-SPsV1c1m5/ses-P5/anat/sub-SPsV1c1m5_ses-P5_T2wBiasBet_TemplateAllen.nii.gz

Output of reg_resample -ref /data/testdata_AIDA/proc_data/sub-SPsV1c1m5/ses-P5/anat/sub-SPsV1c1m5_ses-P5_T2wBiasBet.nii.gz -flo /aida/lib/annoVolume.nii.gz -inter 0 -cpp /data/testdata_AIDA/proc_data/sub-SPsV1c1m5/ses-P5/anat/sub-SPsV1c1m5_ses-P5_T2wBiasBetMatrixBspline.nii -res /data/testdata_AIDA/proc_data/sub-SPsV1c1m5/ses-P5/anat/sub-SPsV1c1m5_ses-P5_T2wBiasBet_Anno_parental.nii.gz:

* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
Command line:
 reg_resample -ref /data/testdata_AIDA/proc_data/sub-SPsV1c1m5/ses-P5/anat/sub-SPsV1c1m5_ses-P5_T2wBiasBet.nii.gz -flo /aida/lib/annoVolume.nii.gz -inter 0 -cpp /data/testdata_AIDA/proc_data/sub-SPsV1c1m5/ses-P5/anat/sub-SPsV1c1m5_ses-P5_T2wBiasBetMatrixBspline.nii -res /data/testdata_AIDA/proc_data/sub-SPsV1c1m5/ses-P5/anat/sub-SPsV1c1m5_ses-P5_T2wBiasBet_Anno_parental.nii.gz

Parameters
Reference image name: /data/testdata_AIDA/proc_data/sub-SPsV1c1m5/ses-P5/anat/sub-SPsV1c1m5_ses-P5_T2wBiasBet.nii.gz
	256x256x48 voxels, 1 volumes
	0.0683594x0.0683594x0.3 mm
Floating image name: /aida/lib/annoVolume.nii.gz
	228x160x264 voxels, 1 volumes
	0.05x0.05x0.05 mm
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *

[NiftyReg] Resampled image has been saved: /data/testdata_AIDA/proc_data/sub-SPsV1c1m5/ses-P5/anat/sub-SPsV1c1m5_ses-P5_T2wBiasBet_Anno_parental.nii.gz

Output of reg_resample -ref /data/testdata_AIDA/proc_data/sub-SPsV1c1m5/ses-P5/anat/sub-SPsV1c1m5_ses-P5_T2wBiasBet.nii.gz -flo /aida/lib/annoVolume+2000_rsfMRI.nii.gz -inter 0 -cpp /data/testdata_AIDA/proc_data/sub-SPsV1c1m5/ses-P5/anat/sub-SPsV1c1m5_ses-P5_T2wBiasBetMatrixBspline.nii -res /data/testdata_AIDA/proc_data/sub-SPsV1c1m5/ses-P5/anat/sub-SPsV1c1m5_ses-P5_T2wBiasBet_AnnoSplit_parental.nii.gz:

* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
Command line:
 reg_resample -ref /data/testdata_AIDA/proc_data/sub-SPsV1c1m5/ses-P5/anat/sub-SPsV1c1m5_ses-P5_T2wBiasBet.nii.gz -flo /aida/lib/annoVolume+2000_rsfMRI.nii.gz -inter 0 -cpp /data/testdata_AIDA/proc_data/sub-SPsV1c1m5/ses-P5/anat/sub-SPsV1c1m5_ses-P5_T2wBiasBetMatrixBspline.nii -res /data/testdata_AIDA/proc_data/sub-SPsV1c1m5/ses-P5/anat/sub-SPsV1c1m5_ses-P5_T2wBiasBet_AnnoSplit_parental.nii.gz

Parameters
Reference image name: /data/testdata_AIDA/proc_data/sub-SPsV1c1m5/ses-P5/anat/sub-SPsV1c1m5_ses-P5_T2wBiasBet.nii.gz
	256x256x48 voxels, 1 volumes
	0.0683594x0.0683594x0.3 mm
Floating image name: /aida/lib/annoVolume+2000_rsfMRI.nii.gz
	228x160x264 voxels, 1 volumes
	0.05x0.05x0.05 mm
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *

[NiftyReg] Resampled image has been saved: /data/testdata_AIDA/proc_data/sub-SPsV1c1m5/ses-P5/anat/sub-SPsV1c1m5_ses-P5_T2wBiasBet_AnnoSplit_parental.nii.gz

Output of reg_resample -ref /data/testdata_AIDA/proc_data/sub-SPsV1c1m5/ses-P5/anat/sub-SPsV1c1m5_ses-P5_T2wBiasBet.nii.gz -flo /aida/lib/annotation_50CHANGEDanno.nii.gz -inter 0 -cpp /data/testdata_AIDA/proc_data/sub-SPsV1c1m5/ses-P5/anat/sub-SPsV1c1m5_ses-P5_T2wBiasBetMatrixBspline.nii -res /data/testdata_AIDA/proc_data/sub-SPsV1c1m5/ses-P5/anat/sub-SPsV1c1m5_ses-P5_T2wBiasBet_Anno.nii.gz:

* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
Command line:
 reg_resample -ref /data/testdata_AIDA/proc_data/sub-SPsV1c1m5/ses-P5/anat/sub-SPsV1c1m5_ses-P5_T2wBiasBet.nii.gz -flo /aida/lib/annotation_50CHANGEDanno.nii.gz -inter 0 -cpp /data/testdata_AIDA/proc_data/sub-SPsV1c1m5/ses-P5/anat/sub-SPsV1c1m5_ses-P5_T2wBiasBetMatrixBspline.nii -res /data/testdata_AIDA/proc_data/sub-SPsV1c1m5/ses-P5/anat/sub-SPsV1c1m5_ses-P5_T2wBiasBet_Anno.nii.gz

Parameters
Reference image name: /data/testdata_AIDA/proc_data/sub-SPsV1c1m5/ses-P5/anat/sub-SPsV1c1m5_ses-P5_T2wBiasBet.nii.gz
	256x256x48 voxels, 1 volumes
	0.0683594x0.0683594x0.3 mm
Floating image name: /aida/lib/annotation_50CHANGEDanno.nii.gz
	228x160x264 voxels, 1 volumes
	0.05x0.05x0.05 mm
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *

[NiftyReg] Resampled image has been saved: /data/testdata_AIDA/proc_data/sub-SPsV1c1m5/ses-P5/anat/sub-SPsV1c1m5_ses-P5_T2wBiasBet_Anno.nii.gz

Output of reg_resample -ref /data/testdata_AIDA/proc_data/sub-SPsV1c1m5/ses-P5/anat/sub-SPsV1c1m5_ses-P5_T2wBiasBet.nii.gz -flo /aida/lib/ARA_annotationR+2000.nii.gz -inter 0 -cpp /data/testdata_AIDA/proc_data/sub-SPsV1c1m5/ses-P5/anat/sub-SPsV1c1m5_ses-P5_T2wBiasBetMatrixBspline.nii -res /data/testdata_AIDA/proc_data/sub-SPsV1c1m5/ses-P5/anat/sub-SPsV1c1m5_ses-P5_T2wBiasBet_AnnoSplit.nii.gz:

* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
Command line:
 reg_resample -ref /data/testdata_AIDA/proc_data/sub-SPsV1c1m5/ses-P5/anat/sub-SPsV1c1m5_ses-P5_T2wBiasBet.nii.gz -flo /aida/lib/ARA_annotationR+2000.nii.gz -inter 0 -cpp /data/testdata_AIDA/proc_data/sub-SPsV1c1m5/ses-P5/anat/sub-SPsV1c1m5_ses-P5_T2wBiasBetMatrixBspline.nii -res /data/testdata_AIDA/proc_data/sub-SPsV1c1m5/ses-P5/anat/sub-SPsV1c1m5_ses-P5_T2wBiasBet_AnnoSplit.nii.gz

Parameters
Reference image name: /data/testdata_AIDA/proc_data/sub-SPsV1c1m5/ses-P5/anat/sub-SPsV1c1m5_ses-P5_T2wBiasBet.nii.gz
	256x256x48 voxels, 1 volumes
	0.0683594x0.0683594x0.3 mm
Floating image name: /aida/lib/ARA_annotationR+2000.nii.gz
	228x160x264 voxels, 1 volumes
	0.05x0.05x0.05 mm
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *

[NiftyReg] Resampled image has been saved: /data/testdata_AIDA/proc_data/sub-SPsV1c1m5/ses-P5/anat/sub-SPsV1c1m5_ses-P5_T2wBiasBet_AnnoSplit.nii.gz

Registration completed