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registration.log

registration.log 28 KB
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  1. Notice: '/data/testdata_AIDA/proc_data/sub-SPsV1c1m3/ses-P5/anat/sub-SPsV1c1m3_ses-P5_T2wBiasBet.nii.gz' has no defined reference (stroke) mask - will proceed without.
    2. 

  2. Output of reg_aladin -ref /data/testdata_AIDA/proc_data/sub-SPsV1c1m3/ses-P5/anat/sub-SPsV1c1m3_ses-P5_T2wBiasBet.nii.gz -flo /aida/lib/NP_template_sc0.nii.gz -res /data/testdata_AIDA/proc_data/sub-SPsV1c1m3/ses-P5/anat/sub-SPsV1c1m3_ses-P5_T2wBiasBet_TemplateAff.nii.gz -aff /data/testdata_AIDA/proc_data/sub-SPsV1c1m3/ses-P5/anat/sub-SPsV1c1m3_ses-P5_T2wBiasBetMatrixAff.txt:
    3. 

  3. 

  4. [NiftyReg ALADIN] Command line:
    5. 

  5. 	 reg_aladin -ref /data/testdata_AIDA/proc_data/sub-SPsV1c1m3/ses-P5/anat/sub-SPsV1c1m3_ses-P5_T2wBiasBet.nii.gz -flo /aida/lib/NP_template_sc0.nii.gz -res /data/testdata_AIDA/proc_data/sub-SPsV1c1m3/ses-P5/anat/sub-SPsV1c1m3_ses-P5_T2wBiasBet_TemplateAff.nii.gz -aff /data/testdata_AIDA/proc_data/sub-SPsV1c1m3/ses-P5/anat/sub-SPsV1c1m3_ses-P5_T2wBiasBetMatrixAff.txt
    6. 

  6. 

  7. [reg_aladin_sym] Parameters
    8. 

  8. [reg_aladin_sym] Reference image name: /data/testdata_AIDA/proc_data/sub-SPsV1c1m3/ses-P5/anat/sub-SPsV1c1m3_ses-P5_T2wBiasBet.nii.gz
    9. 

  9. [reg_aladin_sym] 	256x256x48 voxels
    10. 

  10. [reg_aladin_sym] 	0.0683594x0.0683594x0.3 mm
    11. 

  11. [reg_aladin_sym] Floating image name: /aida/lib/NP_template_sc0.nii.gz
    12. 

  12. [reg_aladin_sym] 	228x160x264 voxels
    13. 

  13. [reg_aladin_sym] 	0.05x0.05x0.05 mm
    14. 

  14. [reg_aladin_sym] Maximum iteration number: 5 (10 during the first level)
    15. 

  15. [reg_aladin_sym] Percentage of blocks: 50 %
    16. 

  16. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
    17. 

  17. [reg_aladin_sym] Current level 1 / 3
    18. 

  18. [reg_aladin_sym] reference image size: 	64x64x48 voxels	0.273438x0.273438x0.3 mm
    19. 

  19. [reg_aladin_sym] floating image size: 	57x40x66 voxels	0.2x0.2x0.2 mm
    20. 

  20. [reg_aladin_sym] Block size = [4 4 4]
    21. 

  21. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
    22. 

  22. [reg_aladin_sym] Forward Block number = [16 16 12]
    23. 

  23. [reg_aladin_sym] Backward Block number = [15 10 17]
    24. 

  24. [reg_aladin_sym] Initial forward transformation matrix::
    25. 

  25. 1	0	0	-8.725
    26. 

  26. 0	1	0	-11.325
    27. 

  27. 0	0	1	-4.575
    28. 

  28. 0	0	0	1
    29. 

  29. [reg_aladin_sym] Initial backward transformation matrix::
    30. 

  30. 1	0	0	8.725
    31. 

  31. 0	1	0	11.325
    32. 

  32. 0	0	1	4.575
    33. 

  33. 0	0	0	1
    34. 

  34. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
    35. 

  35. [reg_aladin_sym] Final forward transformation matrix::
    36. 

  36. 1.03127	-0.0485183	-0.0236794	-8.16295
    37. 

  37. 0.0312682	1.15046	0.0340116	-13.4164
    38. 

  38. 0.0167156	-0.0543036	0.959543	-3.82439
    39. 

  39. 0	0	0	1
    40. 

  40. [reg_aladin_sym] Final backward transformation matrix::
    41. 

  41. 0.968046	0.0418827	0.0224047	8.54971
    42. 

  42. -0.0257686	0.866648	-0.0313548	11.2971
    43. 

  43. -0.0183221	0.0483168	1.04	4.47603
    44. 

  44. 0	0	0	1
    45. 

  45. - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
    46. 

  46. [reg_aladin_sym] Current level 2 / 3
    47. 

  47. [reg_aladin_sym] reference image size: 	128x128x48 voxels	0.136719x0.136719x0.3 mm
    48. 

  48. [reg_aladin_sym] floating image size: 	114x80x132 voxels	0.1x0.1x0.1 mm
    49. 

  49. [reg_aladin_sym] Block size = [4 4 4]
    50. 

  50. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
    51. 

  51. [reg_aladin_sym] Forward Block number = [32 32 12]
    52. 

  52. [reg_aladin_sym] Backward Block number = [29 20 33]
    53. 

  53. [reg_aladin_sym] Initial forward transformation matrix::
    54. 

  54. 1.03127	-0.0485183	-0.0236794	-8.16295
    55. 

  55. 0.0312682	1.15046	0.0340116	-13.4164
    56. 

  56. 0.0167156	-0.0543036	0.959543	-3.82439
    57. 

  57. 0	0	0	1
    58. 

  58. [reg_aladin_sym] Initial backward transformation matrix::
    59. 

  59. 0.968046	0.0418827	0.0224047	8.54971
    60. 

  60. -0.0257686	0.866648	-0.0313548	11.2971
    61. 

  61. -0.0183221	0.0483168	1.04	4.47603
    62. 

  62. 0	0	0	1
    63. 

  63. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
    64. 

  64. [reg_aladin_sym] Final forward transformation matrix::
    65. 

  65. 1.02813	-0.030005	-0.0283593	-8.26036
    66. 

  66. 0.0328736	1.15258	0.0333377	-13.4431
    67. 

  67. 0.0115455	-0.0609782	0.975968	-3.78154
    68. 

  68. 0	0	0	1
    69. 

  69. [reg_aladin_sym] Final backward transformation matrix::
    70. 

  70. 0.971478	0.0267357	0.0273156	8.48747
    71. 

  71. -0.0273265	0.865305	-0.0303516	11.2918
    72. 

  72. -0.0131997	0.0537478	1.0224	4.47977
    73. 

  73. 0	0	0	1
    74. 

  74. - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
    75. 

  75. [reg_aladin_sym] Current level 3 / 3
    76. 

  76. [reg_aladin_sym] reference image size: 	256x256x48 voxels	0.0683594x0.0683594x0.3 mm
    77. 

  77. [reg_aladin_sym] floating image size: 	228x160x264 voxels	0.05x0.05x0.05 mm
    78. 

  78. [reg_aladin_sym] Block size = [4 4 4]
    79. 

  79. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
    80. 

  80. [reg_aladin_sym] Forward Block number = [64 64 12]
    81. 

  81. [reg_aladin_sym] Backward Block number = [57 40 66]
    82. 

  82. [reg_aladin_sym] Initial forward transformation matrix::
    83. 

  83. 1.02813	-0.030005	-0.0283593	-8.26036
    84. 

  84. 0.0328736	1.15258	0.0333377	-13.4431
    85. 

  85. 0.0115455	-0.0609782	0.975968	-3.78154
    86. 

  86. 0	0	0	1
    87. 

  87. [reg_aladin_sym] Initial backward transformation matrix::
    88. 

  88. 0.971478	0.0267357	0.0273156	8.48747
    89. 

  89. -0.0273265	0.865305	-0.0303516	11.2918
    90. 

  90. -0.0131997	0.0537478	1.0224	4.47977
    91. 

  91. 0	0	0	1
    92. 

  92. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
    93. 

  93. [reg_aladin_sym] Final forward transformation matrix::
    94. 

  94. 1.03023	-0.0223568	-0.0361269	-8.31056
    95. 

  95. 0.0363054	1.15326	0.0252715	-13.4412
    96. 

  96. 0.0169202	-0.0481602	0.976374	-3.91361
    97. 

  97. 0	0	0	1
    98. 

  98. [reg_aladin_sym] Final backward transformation matrix::
    99. 

  99. 0.969358	0.0202676	0.0353427	8.46665
    100. 

  100. -0.0301154	0.865539	-0.0235171	11.2915
    101. 

  101. -0.0182841	0.042342	1.02243	4.41855
    102. 

  102. 0	0	0	1
    103. 

  103. - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
    104. 

  104. Registration Performed in 2 min 43 sec
    105. 

  105. Have a good day !
    106. 

  106. 

  107. Output of reg_aladin -ref /aida/lib/average_template_50.nii.gz -flo /data/testdata_AIDA/proc_data/sub-SPsV1c1m3/ses-P5/anat/sub-SPsV1c1m3_ses-P5_T2wBiasBet.nii.gz -res /data/testdata_AIDA/proc_data/sub-SPsV1c1m3/ses-P5/anat/sub-SPsV1c1m3_ses-P5_T2wBiasBet_IncidenceData.nii.gz -aff /data/testdata_AIDA/proc_data/sub-SPsV1c1m3/ses-P5/anat/sub-SPsV1c1m3_ses-P5_T2wBiasBetMatrixInv.txt:
    108. 

  108. 

  109. [NiftyReg ALADIN] Command line:
    110. 

  110. 	 reg_aladin -ref /aida/lib/average_template_50.nii.gz -flo /data/testdata_AIDA/proc_data/sub-SPsV1c1m3/ses-P5/anat/sub-SPsV1c1m3_ses-P5_T2wBiasBet.nii.gz -res /data/testdata_AIDA/proc_data/sub-SPsV1c1m3/ses-P5/anat/sub-SPsV1c1m3_ses-P5_T2wBiasBet_IncidenceData.nii.gz -aff /data/testdata_AIDA/proc_data/sub-SPsV1c1m3/ses-P5/anat/sub-SPsV1c1m3_ses-P5_T2wBiasBetMatrixInv.txt
    111. 

  111. 

  112. [reg_aladin_sym] Parameters
    113. 

  113. [reg_aladin_sym] Reference image name: /aida/lib/average_template_50.nii.gz
    114. 

  114. [reg_aladin_sym] 	228x160x264 voxels
    115. 

  115. [reg_aladin_sym] 	0.05x0.05x0.05 mm
    116. 

  116. [reg_aladin_sym] Floating image name: /data/testdata_AIDA/proc_data/sub-SPsV1c1m3/ses-P5/anat/sub-SPsV1c1m3_ses-P5_T2wBiasBet.nii.gz
    117. 

  117. [reg_aladin_sym] 	256x256x48 voxels
    118. 

  118. [reg_aladin_sym] 	0.0683594x0.0683594x0.3 mm
    119. 

  119. [reg_aladin_sym] Maximum iteration number: 5 (10 during the first level)
    120. 

  120. [reg_aladin_sym] Percentage of blocks: 50 %
    121. 

  121. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
    122. 

  122. [reg_aladin_sym] Current level 1 / 3
    123. 

  123. [reg_aladin_sym] reference image size: 	57x40x66 voxels	0.2x0.2x0.2 mm
    124. 

  124. [reg_aladin_sym] floating image size: 	64x64x48 voxels	0.273438x0.273438x0.3 mm
    125. 

  125. [reg_aladin_sym] Block size = [4 4 4]
    126. 

  126. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
    127. 

  127. [reg_aladin_sym] Forward Block number = [15 10 17]
    128. 

  128. [reg_aladin_sym] Backward Block number = [16 16 12]
    129. 

  129. [reg_aladin_sym] Initial forward transformation matrix::
    130. 

  130. 1	0	0	8.725
    131. 

  131. 0	1	0	11.325
    132. 

  132. 0	0	1	4.575
    133. 

  133. 0	0	0	1
    134. 

  134. [reg_aladin_sym] Initial backward transformation matrix::
    135. 

  135. 1	0	0	-8.725
    136. 

  136. 0	1	0	-11.325
    137. 

  137. 0	0	1	-4.575
    138. 

  138. 0	0	0	1
    139. 

  139. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
    140. 

  140. [reg_aladin_sym] Final forward transformation matrix::
    141. 

  141. 0.995234	0.0501311	0.026558	8.53407
    142. 

  142. -0.0246568	0.899632	-0.0479863	11.4355
    143. 

  143. -0.0292839	0.0697463	1.03378	4.45731
    144. 

  144. 0	0	0	1
    145. 

  145. [reg_aladin_sym] Final backward transformation matrix::
    146. 

  146. 1.00263	-0.0536803	-0.0282496	-7.81671
    147. 

  147. 0.0288906	1.10603	0.0505981	-13.1202
    148. 

  148. 0.0264524	-0.076142	0.963114	-3.64791
    149. 

  149. 0	0	0	1
    150. 

  150. - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
    151. 

  151. [reg_aladin_sym] Current level 2 / 3
    152. 

  152. [reg_aladin_sym] reference image size: 	114x80x132 voxels	0.1x0.1x0.1 mm
    153. 

  153. [reg_aladin_sym] floating image size: 	128x128x48 voxels	0.136719x0.136719x0.3 mm
    154. 

  154. [reg_aladin_sym] Block size = [4 4 4]
    155. 

  155. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
    156. 

  156. [reg_aladin_sym] Forward Block number = [29 20 33]
    157. 

  157. [reg_aladin_sym] Backward Block number = [32 32 12]
    158. 

  158. [reg_aladin_sym] Initial forward transformation matrix::
    159. 

  159. 0.995234	0.0501311	0.026558	8.53407
    160. 

  160. -0.0246568	0.899632	-0.0479863	11.4355
    161. 

  161. -0.0292839	0.0697463	1.03378	4.45731
    162. 

  162. 0	0	0	1
    163. 

  163. [reg_aladin_sym] Initial backward transformation matrix::
    164. 

  164. 1.00263	-0.0536803	-0.0282496	-7.81671
    165. 

  165. 0.0288906	1.10603	0.0505981	-13.1202
    166. 

  166. 0.0264524	-0.076142	0.963114	-3.64791
    167. 

  167. 0	0	0	1
    168. 

  168. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
    169. 

  169. [reg_aladin_sym] Final forward transformation matrix::
    170. 

  170. 0.983976	0.0307085	0.0373169	8.49204
    171. 

  171. -0.0315272	0.88867	-0.0266675	11.3822
    172. 

  172. -0.0201703	0.0575321	1.02196	4.47395
    173. 

  173. 0	0	0	1
    174. 

  174. [reg_aladin_sym] Final backward transformation matrix::
    175. 

  175. 1.01446	-0.0326022	-0.037894	-8.07424
    176. 

  176. 0.0365291	1.1222	0.0279495	-13.2084
    177. 

  177. 0.017966	-0.063819	0.976192	-3.7936
    178. 

  178. 0	0	0	1
    179. 

  179. - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
    180. 

  180. [reg_aladin_sym] Current level 3 / 3
    181. 

  181. [reg_aladin_sym] reference image size: 	228x160x264 voxels	0.05x0.05x0.05 mm
    182. 

  182. [reg_aladin_sym] floating image size: 	256x256x48 voxels	0.0683594x0.0683594x0.3 mm
    183. 

  183. [reg_aladin_sym] Block size = [4 4 4]
    184. 

  184. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
    185. 

  185. [reg_aladin_sym] Forward Block number = [57 40 66]
    186. 

  186. [reg_aladin_sym] Backward Block number = [64 64 12]
    187. 

  187. [reg_aladin_sym] Initial forward transformation matrix::
    188. 

  188. 0.983976	0.0307085	0.0373169	8.49204
    189. 

  189. -0.0315272	0.88867	-0.0266675	11.3822
    190. 

  190. -0.0201703	0.0575321	1.02196	4.47395
    191. 

  191. 0	0	0	1
    192. 

  192. [reg_aladin_sym] Initial backward transformation matrix::
    193. 

  193. 1.01446	-0.0326022	-0.037894	-8.07424
    194. 

  194. 0.0365291	1.1222	0.0279495	-13.2084
    195. 

  195. 0.017966	-0.063819	0.976192	-3.7936
    196. 

  196. 0	0	0	1
    197. 

  197. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
    198. 

  198. [reg_aladin_sym] Final forward transformation matrix::
    199. 

  199. 0.9849	0.0283582	0.0258893	8.47959
    200. 

  200. -0.0336455	0.89254	-0.0235799	11.3893
    201. 

  201. -0.0217607	0.0675071	1.02283	4.50106
    202. 

  202. 0	0	0	1
    203. 

  203. [reg_aladin_sym] Final backward transformation matrix::
    204. 

  204. 1.01372	-0.0302149	-0.0263552	-8.13315
    205. 

  205. 0.0387157	1.11729	0.0247777	-13.165
    206. 

  206. 0.0190116	-0.0743847	0.975484	-3.70473
    207. 

  207. 0	0	0	1
    208. 

  208. - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
    209. 

  209. Registration Performed in 2 min 45 sec
    210. 

  210. Have a good day !
    211. 

  211. 

  212. Output of reg_f3d -ref /data/testdata_AIDA/proc_data/sub-SPsV1c1m3/ses-P5/anat/sub-SPsV1c1m3_ses-P5_T2wBiasBet.nii.gz -flo /aida/lib/NP_template_sc0.nii.gz -sx 3 -sy 3 -sz 3 -jl 0.3 -res /data/testdata_AIDA/proc_data/sub-SPsV1c1m3/ses-P5/anat/sub-SPsV1c1m3_ses-P5_T2wBiasBet_Template.nii.gz -cpp /data/testdata_AIDA/proc_data/sub-SPsV1c1m3/ses-P5/anat/sub-SPsV1c1m3_ses-P5_T2wBiasBetMatrixBspline.nii -aff /data/testdata_AIDA/proc_data/sub-SPsV1c1m3/ses-P5/anat/sub-SPsV1c1m3_ses-P5_T2wBiasBetMatrixAff.txt:
    213. 

  213. 

  214. [NiftyReg F3D] Command line:
    215. 

  215. 	 reg_f3d -ref /data/testdata_AIDA/proc_data/sub-SPsV1c1m3/ses-P5/anat/sub-SPsV1c1m3_ses-P5_T2wBiasBet.nii.gz -flo /aida/lib/NP_template_sc0.nii.gz -sx 3 -sy 3 -sz 3 -jl 0.3 -res /data/testdata_AIDA/proc_data/sub-SPsV1c1m3/ses-P5/anat/sub-SPsV1c1m3_ses-P5_T2wBiasBet_Template.nii.gz -cpp /data/testdata_AIDA/proc_data/sub-SPsV1c1m3/ses-P5/anat/sub-SPsV1c1m3_ses-P5_T2wBiasBetMatrixBspline.nii -aff /data/testdata_AIDA/proc_data/sub-SPsV1c1m3/ses-P5/anat/sub-SPsV1c1m3_ses-P5_T2wBiasBetMatrixAff.txt
    216. 

  216. 

  217. [NiftyReg F3D] OpenMP is used with 8 thread(s)
    218. 

  218. [NiftyReg F3D] **************************************************
    219. 

  219. [NiftyReg F3D] INPUT PARAMETERS
    220. 

  220. [NiftyReg F3D] **************************************************
    221. 

  221. [NiftyReg F3D] Reference image:
    222. 

  222. [NiftyReg F3D] 	* name: /data/testdata_AIDA/proc_data/sub-SPsV1c1m3/ses-P5/anat/sub-SPsV1c1m3_ses-P5_T2wBiasBet.nii.gz
    223. 

  223. [NiftyReg F3D] 	* image dimension: 256 x 256 x 48 x 1
    224. 

  224. [NiftyReg F3D] 	* image spacing: 0.0683594 x 0.0683594 x 0.3 mm
    225. 

  225. [NiftyReg F3D] 	* intensity threshold for timepoint 1/1: [-3.4e+38 3.4e+38]
    226. 

  226. [NiftyReg F3D] 	* gaussian smoothing sigma: 0
    227. 

  227. [NiftyReg F3D]
    228. 

  228. [NiftyReg F3D] Floating image:
    229. 

  229. [NiftyReg F3D] 	* name: /aida/lib/NP_template_sc0.nii.gz
    230. 

  230. [NiftyReg F3D] 	* image dimension: 228 x 160 x 264 x 1
    231. 

  231. [NiftyReg F3D] 	* image spacing: 0.05 x 0.05 x 0.05 mm
    232. 

  232. [NiftyReg F3D] 	* intensity threshold for timepoint 1/1: [-3.4e+38 3.4e+38]
    233. 

  233. [NiftyReg F3D] 	* gaussian smoothing sigma: 0
    234. 

  234. [NiftyReg F3D]
    235. 

  235. [NiftyReg F3D] Warped image padding value: nan
    236. 

  236. [NiftyReg F3D]
    237. 

  237. [NiftyReg F3D] Level number: 3
    238. 

  238. [NiftyReg F3D]
    239. 

  239. [NiftyReg F3D] Maximum iteration number per level: 300
    240. 

  240. [NiftyReg F3D]
    241. 

  241. [NiftyReg F3D] Final spacing in mm: 3 3 3
    242. 

  242. [NiftyReg F3D]
    243. 

  243. [NiftyReg F3D] The NMI is used as a similarity measure.
    244. 

  244. [NiftyReg F3D] Similarity measure term weight: 0.695
    245. 

  245. [NiftyReg F3D]
    246. 

  246. [NiftyReg F3D] Bending energy penalty term weight: 0.005
    247. 

  247. [NiftyReg F3D]
    248. 

  248. [NiftyReg F3D] Linear energy penalty term weights: 0 0
    249. 

  249. [NiftyReg F3D]
    250. 

  250. [NiftyReg F3D] L2 norm of the displacement penalty term weights: 0
    251. 

  251. [NiftyReg F3D]
    252. 

  252. [NiftyReg F3D] Jacobian-based penalty term weight: 0.3
    253. 

  253. [NiftyReg F3D] 	* Jacobian-based penalty term is approximated
    254. 

  254. [NiftyReg F3D] **************************************************
    255. 

  255. [NiftyReg F3D] Current level: 1 / 3
    256. 

  256. [NiftyReg F3D] Current reference image
    257. 

  257. [NiftyReg F3D] 	* image dimension: 64 x 64 x 48 x 1
    258. 

  258. [NiftyReg F3D] 	* image spacing: 0.273438 x 0.273438 x 0.3 mm
    259. 

  259. [NiftyReg F3D] Current floating image
    260. 

  260. [NiftyReg F3D] 	* image dimension: 57 x 40 x 66 x 1
    261. 

  261. [NiftyReg F3D] 	* image spacing: 0.2 x 0.2 x 0.2 mm
    262. 

  262. [NiftyReg F3D] Current control point image
    263. 

  263. [NiftyReg F3D] 	* image dimension: 5 x 5 x 5
    264. 

  264. [NiftyReg F3D] 	* image spacing: 12 x 12 x 12 mm
    265. 

  265. [NiftyReg F3D] Initial objective function: 0.784177 = (wSIM)0.791007 - (wBE)1.6644e-15 - (wLE)0 - (wL2)0 - (wJAC)0.00683003
    266. 

  266. [NiftyReg F3D] [9] Current objective function: 0.786469 = (wSIM)0.793299 - (wBE)1.60e-08 - (wJAC)6.83e-03 [+ 0.15 mm]
    267. 

  267. [NiftyReg F3D] [17] Current objective function: 0.7867 = (wSIM)0.793509 - (wBE)4.59e-08 - (wJAC)6.81e-03 [+ 0.075 mm]
    268. 

  268. [NiftyReg F3D] [27] Current objective function: 0.788307 = (wSIM)0.795074 - (wBE)1.22e-07 - (wJAC)6.77e-03 [+ 0.163172 mm]
    269. 

  269. [NiftyReg F3D] [35] Current objective function: 0.789233 = (wSIM)0.795999 - (wBE)3.40e-07 - (wJAC)6.77e-03 [+ 0.163172 mm]
    270. 

  270. [NiftyReg F3D] [43] Current objective function: 0.78924 = (wSIM)0.796004 - (wBE)3.57e-07 - (wJAC)6.76e-03 [+ 0.00509912 mm]
    271. 

  271. [NiftyReg F3D] [45] Current objective function: 0.78924 = (wSIM)0.796004 - (wBE)3.57e-07 - (wJAC)6.76e-03 [+ 0 mm]
    272. 

  272. [NiftyReg F3D] Current registration level done
    273. 

  273. [NiftyReg F3D] --------------------------------------------------
    274. 

  274. [NiftyReg F3D] **************************************************
    275. 

  275. [NiftyReg F3D] Current level: 2 / 3
    276. 

  276. [NiftyReg F3D] Current reference image
    277. 

  277. [NiftyReg F3D] 	* image dimension: 128 x 128 x 48 x 1
    278. 

  278. [NiftyReg F3D] 	* image spacing: 0.136719 x 0.136719 x 0.3 mm
    279. 

  279. [NiftyReg F3D] Current floating image
    280. 

  280. [NiftyReg F3D] 	* image dimension: 114 x 80 x 132 x 1
    281. 

  281. [NiftyReg F3D] 	* image spacing: 0.1 x 0.1 x 0.1 mm
    282. 

  282. [NiftyReg F3D] Current control point image
    283. 

  283. [NiftyReg F3D] 	* image dimension: 6 x 6 x 6
    284. 

  284. [NiftyReg F3D] 	* image spacing: 6 x 6 x 6 mm
    285. 

  285. [NiftyReg F3D] Initial objective function: 0.783809 = (wSIM)0.790567 - (wBE)7.22512e-07 - (wLE)0 - (wL2)0 - (wJAC)0.00675708
    286. 

  286. [NiftyReg F3D] [9] Current objective function: 0.784519 = (wSIM)0.791063 - (wBE)2.18e-06 - (wJAC)6.54e-03 [+ 0.3 mm]
    287. 

  287. [NiftyReg F3D] [19] Current objective function: 0.786783 = (wSIM)0.793194 - (wBE)7.59e-06 - (wJAC)6.40e-03 [+ 0.375 mm]
    288. 

  288. [NiftyReg F3D] [28] Current objective function: 0.786937 = (wSIM)0.793315 - (wBE)1.09e-05 - (wJAC)6.37e-03 [+ 0.0375 mm]
    289. 

  289. [NiftyReg F3D] [37] Current objective function: 0.788017 = (wSIM)0.794348 - (wBE)1.62e-05 - (wJAC)6.32e-03 [+ 0.124125 mm]
    290. 

  290. [NiftyReg F3D] [46] Current objective function: 0.789491 = (wSIM)0.795776 - (wBE)1.84e-05 - (wJAC)6.27e-03 [+ 0.128392 mm]
    291. 

  291. [NiftyReg F3D] [55] Current objective function: 0.789577 = (wSIM)0.79587 - (wBE)1.83e-05 - (wJAC)6.27e-03 [+ 0.0686094 mm]
    292. 

  292. [NiftyReg F3D] [62] Current objective function: 0.789579 = (wSIM)0.795873 - (wBE)1.82e-05 - (wJAC)6.28e-03 [+ 0.0171523 mm]
    293. 

  293. [NiftyReg F3D] [68] Current objective function: 0.78961 = (wSIM)0.795904 - (wBE)1.78e-05 - (wJAC)6.28e-03 [+ 0.0360199 mm]
    294. 

  294. [NiftyReg F3D] [75] Current objective function: 0.789658 = (wSIM)0.795942 - (wBE)1.70e-05 - (wJAC)6.27e-03 [+ 0.0756418 mm]
    295. 

  295. [NiftyReg F3D] [81] Current objective function: 0.789658 = (wSIM)0.795942 - (wBE)1.70e-05 - (wJAC)6.27e-03 [+ 0 mm]
    296. 

  296. [NiftyReg F3D] Current registration level done
    297. 

  297. [NiftyReg F3D] --------------------------------------------------
    298. 

  298. [NiftyReg F3D] **************************************************
    299. 

  299. [NiftyReg F3D] Current level: 3 / 3
    300. 

  300. [NiftyReg F3D] Current reference image
    301. 

  301. [NiftyReg F3D] 	* image dimension: 256 x 256 x 48 x 1
    302. 

  302. [NiftyReg F3D] 	* image spacing: 0.0683594 x 0.0683594 x 0.3 mm
    303. 

  303. [NiftyReg F3D] Current floating image
    304. 

  304. [NiftyReg F3D] 	* image dimension: 228 x 160 x 264 x 1
    305. 

  305. [NiftyReg F3D] 	* image spacing: 0.05 x 0.05 x 0.05 mm
    306. 

  306. [NiftyReg F3D] Current control point image
    307. 

  307. [NiftyReg F3D] 	* image dimension: 9 x 9 x 8
    308. 

  308. [NiftyReg F3D] 	* image spacing: 3 x 3 x 3 mm
    309. 

  309. [NiftyReg F3D] Initial objective function: 0.784511 = (wSIM)0.790605 - (wBE)2.71458e-05 - (wLE)0 - (wL2)0 - (wJAC)0.00606706
    310. 

  310. [NiftyReg F3D] [9] Current objective function: 0.785239 = (wSIM)0.791306 - (wBE)3.51e-05 - (wJAC)6.03e-03 [+ 0.3 mm]
    311. 

  311. [NiftyReg F3D] [18] Current objective function: 0.785587 = (wSIM)0.791633 - (wBE)4.74e-05 - (wJAC)6.00e-03 [+ 0.15 mm]
    312. 

  312. [NiftyReg F3D] [27] Current objective function: 0.786174 = (wSIM)0.792193 - (wBE)5.26e-05 - (wJAC)5.97e-03 [+ 0.170625 mm]
    313. 

  313. [NiftyReg F3D] [35] Current objective function: 0.78654 = (wSIM)0.792526 - (wBE)6.50e-05 - (wJAC)5.92e-03 [+ 0.0853125 mm]
    314. 

  314. [NiftyReg F3D] [45] Current objective function: 0.786935 = (wSIM)0.792885 - (wBE)7.72e-05 - (wJAC)5.87e-03 [+ 0.204963 mm]
    315. 

  315. [NiftyReg F3D] [55] Current objective function: 0.786958 = (wSIM)0.792894 - (wBE)8.69e-05 - (wJAC)5.85e-03 [+ 0.0547636 mm]
    316. 

  316. [NiftyReg F3D] [63] Current objective function: 0.787445 = (wSIM)0.793389 - (wBE)8.65e-05 - (wJAC)5.86e-03 [+ 0.115004 mm]
    317. 

  317. [NiftyReg F3D] [71] Current objective function: 0.787513 = (wSIM)0.793459 - (wBE)8.88e-05 - (wJAC)5.86e-03 [+ 0.0575018 mm]
    318. 

  318. [NiftyReg F3D] [81] Current objective function: 0.78778 = (wSIM)0.793685 - (wBE)1.08e-04 - (wJAC)5.80e-03 [+ 0.228598 mm]
    319. 

  319. [NiftyReg F3D] [90] Current objective function: 0.787868 = (wSIM)0.793708 - (wBE)1.43e-04 - (wJAC)5.70e-03 [+ 0.114299 mm]
    320. 

  320. [NiftyReg F3D] [98] Current objective function: 0.788271 = (wSIM)0.794049 - (wBE)2.03e-04 - (wJAC)5.58e-03 [+ 0.114299 mm]
    321. 

  321. [NiftyReg F3D] [108] Current objective function: 0.788661 = (wSIM)0.794452 - (wBE)1.87e-04 - (wJAC)5.60e-03 [+ 0.134337 mm]
    322. 

  322. [NiftyReg F3D] [116] Current objective function: 0.788688 = (wSIM)0.79448 - (wBE)1.86e-04 - (wJAC)5.61e-03 [+ 0.0167922 mm]
    323. 

  323. [NiftyReg F3D] [122] Current objective function: 0.788738 = (wSIM)0.794525 - (wBE)1.88e-04 - (wJAC)5.60e-03 [+ 0.0352635 mm]
    324. 

  324. [NiftyReg F3D] [130] Current objective function: 0.788818 = (wSIM)0.794585 - (wBE)1.94e-04 - (wJAC)5.57e-03 [+ 0.079387 mm]
    325. 

  325. [NiftyReg F3D] [137] Current objective function: 0.788901 = (wSIM)0.794648 - (wBE)2.07e-04 - (wJAC)5.54e-03 [+ 0.079387 mm]
    326. 

  326. [NiftyReg F3D] [144] Current objective function: 0.788977 = (wSIM)0.7947 - (wBE)2.32e-04 - (wJAC)5.49e-03 [+ 0.079387 mm]
    327. 

  327. [NiftyReg F3D] [153] Current objective function: 0.789174 = (wSIM)0.794891 - (wBE)2.49e-04 - (wJAC)5.47e-03 [+ 0.0848449 mm]
    328. 

  328. [NiftyReg F3D] [160] Current objective function: 0.789182 = (wSIM)0.794877 - (wBE)3.03e-04 - (wJAC)5.39e-03 [+ 0.0848449 mm]
    329. 

  329. [NiftyReg F3D] [167] Current objective function: 0.789295 = (wSIM)0.794973 - (wBE)3.19e-04 - (wJAC)5.36e-03 [+ 0.0848449 mm]
    330. 

  330. [NiftyReg F3D] [174] Current objective function: 0.789473 = (wSIM)0.795138 - (wBE)3.32e-04 - (wJAC)5.33e-03 [+ 0.0848449 mm]
    331. 

  331. [NiftyReg F3D] [181] Current objective function: 0.789569 = (wSIM)0.795233 - (wBE)3.40e-04 - (wJAC)5.32e-03 [+ 0.0848449 mm]
    332. 

  332. [NiftyReg F3D] [190] Current objective function: 0.789662 = (wSIM)0.795325 - (wBE)3.78e-04 - (wJAC)5.29e-03 [+ 0.0965111 mm]
    333. 

  333. [NiftyReg F3D] [200] Current objective function: 0.789888 = (wSIM)0.795535 - (wBE)3.89e-04 - (wJAC)5.26e-03 [+ 0.126701 mm]
    334. 

  334. [NiftyReg F3D] [209] Current objective function: 0.789896 = (wSIM)0.79554 - (wBE)3.92e-04 - (wJAC)5.25e-03 [+ 0.020193 mm]
    335. 

  335. [NiftyReg F3D] [217] Current objective function: 0.790025 = (wSIM)0.795672 - (wBE)3.98e-04 - (wJAC)5.25e-03 [+ 0.0668387 mm]
    336. 

  336. [NiftyReg F3D] [224] Current objective function: 0.790027 = (wSIM)0.795671 - (wBE)4.08e-04 - (wJAC)5.24e-03 [+ 0.0668387 mm]
    337. 

  337. [NiftyReg F3D] [231] Current objective function: 0.790099 = (wSIM)0.795733 - (wBE)4.25e-04 - (wJAC)5.21e-03 [+ 0.0668387 mm]
    338. 

  338. [NiftyReg F3D] [238] Current objective function: 0.790149 = (wSIM)0.79578 - (wBE)4.41e-04 - (wJAC)5.19e-03 [+ 0.0668387 mm]
    339. 

  339. [NiftyReg F3D] [245] Current objective function: 0.790209 = (wSIM)0.795841 - (wBE)4.75e-04 - (wJAC)5.16e-03 [+ 0.0668387 mm]
    340. 

  340. [NiftyReg F3D] [254] Current objective function: 0.790332 = (wSIM)0.795968 - (wBE)5.43e-04 - (wJAC)5.09e-03 [+ 0.113709 mm]
    341. 

  341. [NiftyReg F3D] [264] Current objective function: 0.790604 = (wSIM)0.796235 - (wBE)6.02e-04 - (wJAC)5.03e-03 [+ 0.121918 mm]
    342. 

  342. [NiftyReg F3D] [272] Current objective function: 0.790655 = (wSIM)0.796286 - (wBE)6.36e-04 - (wJAC)5.00e-03 [+ 0.0304794 mm]
    343. 

  343. [NiftyReg F3D] [279] Current objective function: 0.790823 = (wSIM)0.796462 - (wBE)6.59e-04 - (wJAC)4.98e-03 [+ 0.0640068 mm]
    344. 

  344. [NiftyReg F3D] [286] Current objective function: 0.790836 = (wSIM)0.796477 - (wBE)6.74e-04 - (wJAC)4.97e-03 [+ 0.0160017 mm]
    345. 

  345. [NiftyReg F3D] [292] Current objective function: 0.790861 = (wSIM)0.796495 - (wBE)6.69e-04 - (wJAC)4.97e-03 [+ 0.0336036 mm]
    346. 

  346. [NiftyReg F3D] [297] Current objective function: 0.790861 = (wSIM)0.796495 - (wBE)6.69e-04 - (wJAC)4.97e-03 [+ 0 mm]
    347. 

  347. [NiftyReg F3D] Current registration level done
    348. 

  348. [NiftyReg F3D] --------------------------------------------------
    349. 

  349. [NiftyReg F3D] Registration Performed in 5 min 56 sec
    350. 

  350. [NiftyReg F3D] Have a good day !
    351. 

  351. 

  352. Output of reg_resample -ref /data/testdata_AIDA/proc_data/sub-SPsV1c1m3/ses-P5/anat/sub-SPsV1c1m3_ses-P5_T2wBiasBet.nii.gz -flo /aida/lib/average_template_50.nii.gz -cpp /data/testdata_AIDA/proc_data/sub-SPsV1c1m3/ses-P5/anat/sub-SPsV1c1m3_ses-P5_T2wBiasBetMatrixBspline.nii -res /data/testdata_AIDA/proc_data/sub-SPsV1c1m3/ses-P5/anat/sub-SPsV1c1m3_ses-P5_T2wBiasBet_TemplateAllen.nii.gz:
    353. 

  353. 

  354. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
    355. 

  355. Command line:
    356. 

  356.  reg_resample -ref /data/testdata_AIDA/proc_data/sub-SPsV1c1m3/ses-P5/anat/sub-SPsV1c1m3_ses-P5_T2wBiasBet.nii.gz -flo /aida/lib/average_template_50.nii.gz -cpp /data/testdata_AIDA/proc_data/sub-SPsV1c1m3/ses-P5/anat/sub-SPsV1c1m3_ses-P5_T2wBiasBetMatrixBspline.nii -res /data/testdata_AIDA/proc_data/sub-SPsV1c1m3/ses-P5/anat/sub-SPsV1c1m3_ses-P5_T2wBiasBet_TemplateAllen.nii.gz
    357. 

  357. 

  358. Parameters
    359. 

  359. Reference image name: /data/testdata_AIDA/proc_data/sub-SPsV1c1m3/ses-P5/anat/sub-SPsV1c1m3_ses-P5_T2wBiasBet.nii.gz
    360. 

  360. 	256x256x48 voxels, 1 volumes
    361. 

  361. 	0.0683594x0.0683594x0.3 mm
    362. 

  362. Floating image name: /aida/lib/average_template_50.nii.gz
    363. 

  363. 	228x160x264 voxels, 1 volumes
    364. 

  364. 	0.05x0.05x0.05 mm
    365. 

  365. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
    366. 

  366. 

  367. [NiftyReg] Resampled image has been saved: /data/testdata_AIDA/proc_data/sub-SPsV1c1m3/ses-P5/anat/sub-SPsV1c1m3_ses-P5_T2wBiasBet_TemplateAllen.nii.gz
    368. 

  368. 

  369. Output of reg_resample -ref /data/testdata_AIDA/proc_data/sub-SPsV1c1m3/ses-P5/anat/sub-SPsV1c1m3_ses-P5_T2wBiasBet.nii.gz -flo /aida/lib/annoVolume.nii.gz -inter 0 -cpp /data/testdata_AIDA/proc_data/sub-SPsV1c1m3/ses-P5/anat/sub-SPsV1c1m3_ses-P5_T2wBiasBetMatrixBspline.nii -res /data/testdata_AIDA/proc_data/sub-SPsV1c1m3/ses-P5/anat/sub-SPsV1c1m3_ses-P5_T2wBiasBet_Anno_parental.nii.gz:
    370. 

  370. 

  371. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
    372. 

  372. Command line:
    373. 

  373.  reg_resample -ref /data/testdata_AIDA/proc_data/sub-SPsV1c1m3/ses-P5/anat/sub-SPsV1c1m3_ses-P5_T2wBiasBet.nii.gz -flo /aida/lib/annoVolume.nii.gz -inter 0 -cpp /data/testdata_AIDA/proc_data/sub-SPsV1c1m3/ses-P5/anat/sub-SPsV1c1m3_ses-P5_T2wBiasBetMatrixBspline.nii -res /data/testdata_AIDA/proc_data/sub-SPsV1c1m3/ses-P5/anat/sub-SPsV1c1m3_ses-P5_T2wBiasBet_Anno_parental.nii.gz
    374. 

  374. 

  375. Parameters
    376. 

  376. Reference image name: /data/testdata_AIDA/proc_data/sub-SPsV1c1m3/ses-P5/anat/sub-SPsV1c1m3_ses-P5_T2wBiasBet.nii.gz
    377. 

  377. 	256x256x48 voxels, 1 volumes
    378. 

  378. 	0.0683594x0.0683594x0.3 mm
    379. 

  379. Floating image name: /aida/lib/annoVolume.nii.gz
    380. 

  380. 	228x160x264 voxels, 1 volumes
    381. 

  381. 	0.05x0.05x0.05 mm
    382. 

  382. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
    383. 

  383. 

  384. [NiftyReg] Resampled image has been saved: /data/testdata_AIDA/proc_data/sub-SPsV1c1m3/ses-P5/anat/sub-SPsV1c1m3_ses-P5_T2wBiasBet_Anno_parental.nii.gz
    385. 

  385. 

  386. Output of reg_resample -ref /data/testdata_AIDA/proc_data/sub-SPsV1c1m3/ses-P5/anat/sub-SPsV1c1m3_ses-P5_T2wBiasBet.nii.gz -flo /aida/lib/annoVolume+2000_rsfMRI.nii.gz -inter 0 -cpp /data/testdata_AIDA/proc_data/sub-SPsV1c1m3/ses-P5/anat/sub-SPsV1c1m3_ses-P5_T2wBiasBetMatrixBspline.nii -res /data/testdata_AIDA/proc_data/sub-SPsV1c1m3/ses-P5/anat/sub-SPsV1c1m3_ses-P5_T2wBiasBet_AnnoSplit_parental.nii.gz:
    387. 

  387. 

  388. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
    389. 

  389. Command line:
    390. 

  390.  reg_resample -ref /data/testdata_AIDA/proc_data/sub-SPsV1c1m3/ses-P5/anat/sub-SPsV1c1m3_ses-P5_T2wBiasBet.nii.gz -flo /aida/lib/annoVolume+2000_rsfMRI.nii.gz -inter 0 -cpp /data/testdata_AIDA/proc_data/sub-SPsV1c1m3/ses-P5/anat/sub-SPsV1c1m3_ses-P5_T2wBiasBetMatrixBspline.nii -res /data/testdata_AIDA/proc_data/sub-SPsV1c1m3/ses-P5/anat/sub-SPsV1c1m3_ses-P5_T2wBiasBet_AnnoSplit_parental.nii.gz
    391. 

  391. 

  392. Parameters
    393. 

  393. Reference image name: /data/testdata_AIDA/proc_data/sub-SPsV1c1m3/ses-P5/anat/sub-SPsV1c1m3_ses-P5_T2wBiasBet.nii.gz
    394. 

  394. 	256x256x48 voxels, 1 volumes
    395. 

  395. 	0.0683594x0.0683594x0.3 mm
    396. 

  396. Floating image name: /aida/lib/annoVolume+2000_rsfMRI.nii.gz
    397. 

  397. 	228x160x264 voxels, 1 volumes
    398. 

  398. 	0.05x0.05x0.05 mm
    399. 

  399. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
    400. 

  400. 

  401. [NiftyReg] Resampled image has been saved: /data/testdata_AIDA/proc_data/sub-SPsV1c1m3/ses-P5/anat/sub-SPsV1c1m3_ses-P5_T2wBiasBet_AnnoSplit_parental.nii.gz
    402. 

  402. 

  403. Output of reg_resample -ref /data/testdata_AIDA/proc_data/sub-SPsV1c1m3/ses-P5/anat/sub-SPsV1c1m3_ses-P5_T2wBiasBet.nii.gz -flo /aida/lib/annotation_50CHANGEDanno.nii.gz -inter 0 -cpp /data/testdata_AIDA/proc_data/sub-SPsV1c1m3/ses-P5/anat/sub-SPsV1c1m3_ses-P5_T2wBiasBetMatrixBspline.nii -res /data/testdata_AIDA/proc_data/sub-SPsV1c1m3/ses-P5/anat/sub-SPsV1c1m3_ses-P5_T2wBiasBet_Anno.nii.gz:
    404. 

  404. 

  405. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
    406. 

  406. Command line:
    407. 

  407.  reg_resample -ref /data/testdata_AIDA/proc_data/sub-SPsV1c1m3/ses-P5/anat/sub-SPsV1c1m3_ses-P5_T2wBiasBet.nii.gz -flo /aida/lib/annotation_50CHANGEDanno.nii.gz -inter 0 -cpp /data/testdata_AIDA/proc_data/sub-SPsV1c1m3/ses-P5/anat/sub-SPsV1c1m3_ses-P5_T2wBiasBetMatrixBspline.nii -res /data/testdata_AIDA/proc_data/sub-SPsV1c1m3/ses-P5/anat/sub-SPsV1c1m3_ses-P5_T2wBiasBet_Anno.nii.gz
    408. 

  408. 

  409. Parameters
    410. 

  410. Reference image name: /data/testdata_AIDA/proc_data/sub-SPsV1c1m3/ses-P5/anat/sub-SPsV1c1m3_ses-P5_T2wBiasBet.nii.gz
    411. 

  411. 	256x256x48 voxels, 1 volumes
    412. 

  412. 	0.0683594x0.0683594x0.3 mm
    413. 

  413. Floating image name: /aida/lib/annotation_50CHANGEDanno.nii.gz
    414. 

  414. 	228x160x264 voxels, 1 volumes
    415. 

  415. 	0.05x0.05x0.05 mm
    416. 

  416. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
    417. 

  417. 

  418. [NiftyReg] Resampled image has been saved: /data/testdata_AIDA/proc_data/sub-SPsV1c1m3/ses-P5/anat/sub-SPsV1c1m3_ses-P5_T2wBiasBet_Anno.nii.gz
    419. 

  419. 

  420. Output of reg_resample -ref /data/testdata_AIDA/proc_data/sub-SPsV1c1m3/ses-P5/anat/sub-SPsV1c1m3_ses-P5_T2wBiasBet.nii.gz -flo /aida/lib/ARA_annotationR+2000.nii.gz -inter 0 -cpp /data/testdata_AIDA/proc_data/sub-SPsV1c1m3/ses-P5/anat/sub-SPsV1c1m3_ses-P5_T2wBiasBetMatrixBspline.nii -res /data/testdata_AIDA/proc_data/sub-SPsV1c1m3/ses-P5/anat/sub-SPsV1c1m3_ses-P5_T2wBiasBet_AnnoSplit.nii.gz:
    421. 

  421. 

  422. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
    423. 

  423. Command line:
    424. 

  424.  reg_resample -ref /data/testdata_AIDA/proc_data/sub-SPsV1c1m3/ses-P5/anat/sub-SPsV1c1m3_ses-P5_T2wBiasBet.nii.gz -flo /aida/lib/ARA_annotationR+2000.nii.gz -inter 0 -cpp /data/testdata_AIDA/proc_data/sub-SPsV1c1m3/ses-P5/anat/sub-SPsV1c1m3_ses-P5_T2wBiasBetMatrixBspline.nii -res /data/testdata_AIDA/proc_data/sub-SPsV1c1m3/ses-P5/anat/sub-SPsV1c1m3_ses-P5_T2wBiasBet_AnnoSplit.nii.gz
    425. 

  425. 

  426. Parameters
    427. 

  427. Reference image name: /data/testdata_AIDA/proc_data/sub-SPsV1c1m3/ses-P5/anat/sub-SPsV1c1m3_ses-P5_T2wBiasBet.nii.gz
    428. 

  428. 	256x256x48 voxels, 1 volumes
    429. 

  429. 	0.0683594x0.0683594x0.3 mm
    430. 

  430. Floating image name: /aida/lib/ARA_annotationR+2000.nii.gz
    431. 

  431. 	228x160x264 voxels, 1 volumes
    432. 

  432. 	0.05x0.05x0.05 mm
    433. 

  433. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
    434. 

  434. 

  435. [NiftyReg] Resampled image has been saved: /data/testdata_AIDA/proc_data/sub-SPsV1c1m3/ses-P5/anat/sub-SPsV1c1m3_ses-P5_T2wBiasBet_AnnoSplit.nii.gz
    436. 

  436. 

  437. Registration completed
    438.