2024_Ruthe_SND/input/C57BL6_mouse/DukeRCCF.txt

1 CH__Cerebrum_left
2 grey__Basic_cell_groups_and_regions_left
3 OB__Olfactory_bulb_left
4 AON__Anterior_olfactory_nucleus_left
5 FRP__Frontal_pole__cerebral_cortex_left
6 ORB__Orbital_area_left
7 PL__Prelimbic_area_left
8 ILA__Infralimbic_area_left
9 ACA__Anterior_cingulate_area_left
10 AI__Agranular_insular_area_left
11 GU__Gustatory_areas_left
12 PIR__Piriform_area_left
13 VISC__Visceral_area_left
14 MOp__Primary_motor_area_left
15 MOs__Secondary_motor_area_left
16 SSp__Primary_somatosensory_area_left
17 SSp-bfd__Primary_somatosensory_area__barrel_field_left
18 SSs__Supplemental_somatosensory_area_left
19 PTLp__Posterior_parietal_association_areas_left
20 AUD__Auditory_areas_left
21 TEa__Temporal_association_areas_left
22 ECT__Ectorhinal_area_left
23 PERI__Perirhinal_area_left
24 RSP__Retrosplenial_area_left
25 VIS__Visual_areas_left
26 VISp__Primary_visual_area_left
27 ENT__Entorhinal_area_left
28 SUBR__Subicular_region_left
29 HI__Hippocampus_left
30 HIP__Hippocampal_region_left
31 CA1__Field_CA1_left
32 CA3__Field_CA3_left
33 DG__Dentate_gyrus_left
34 DG-sg__Dentate_gyrus__granule_cell_layer_left
35 DG-po__Dentate_gyrus__polymorph_layer_left
36 CLA__Claustrum_left
37 CEA__Central_amygdalar_nucleus_left
38 sAMY__Striatum-like_amygdalar_nuclei_left
39 MEA__Medial_amygdalar_nucleus_left
40 LA__Lateral_amygdalar_nucleus_left
41 BLA__Basolateral_amygdalar_nucleus_left
42 BMA__Basomedial_amygdalar_nucleus_left
43 PA__Posterior_amygdalar_nucleus_left
44 COAz__Cortical_amygdalar_zones_left
45 EP__Endopiriform_nucleus_left
46 STR__Striatum_left
47 STRd__Striatum_dorsal_region_left
48 ACB__Nucleus_accumbens_left
49 FS__Fundus_of_striatum_left
50 OT__Olfactory_tubercle_left
51 GPe__Globus_pallidus__external_segment_left
52 GPi__Globus_pallidus__internal_segment_left
53 SI__Substantia_innominata_left
54 MSC__Medial_septal_complex_left
55 LS__Lateral_septal_nucleus_left
56 BST__Bed_nuclei_of_the_stria_terminalis_left
57 MA__Magnocellular_nucleus__Meynert__left
58 TH__Thalamus_left
59 AM__Anteromedial_nucleus_left
60 AD__Anterodorsal_nucleus_left
61 AV__Anteroventral_nucleus_of_thalamus_left
62 LD__Lateral_dorsal_nucleus_of_the_thalamus_left
63 VAL__Ventral_anterior-lateral_complex_of_the_thalamus_left
64 VM__Ventral_medial_nucleus_of_the_thalamus_left
65 VP__Ventral_posterior_complex_of_the_thalamus_left
66 VPM__Ventral_posteromedial_nucleus_of_the_thalamus_left
67 VPL__Ventral_posterolateral_nucleus_of_the_thalamus_left
68 PT__Parataenial_nucleus_left
69 PVT__Paraventricular_nucleus_of_the_thalamus_left
70 RE__Nucleus_of_reuniens_left
71 CL__Central_lateral_nucleus_of_the_thalamus_left
72 CM__Central_medial_nucleus_of_the_thalamus_left
73 PCN__Paracentral_nucleus_left
74 PF__Parafascicular_nucleus_left
75 PIL__Posterior_intralaminar_thalamic_nucleus_left
76 MD__Mediodorsal_nucleus_of_thalamus_left
77 LP__Lateral_posterior_nucleus_of_the_thalamus_left
78 PO__Posterior_complex_of_the_thalamus_left
79 MGd__Medial_geniculate_complex__dorsal_part_left
80 MGv__Medial_geniculate_complex__ventral_part_left
81 MGm__Medial_geniculate_complex__medial_part_left
82 LGd__Dorsal_part_of_the_lateral_geniculate_complex_left
83 LGv__Ventral_part_of_the_lateral_geniculate_complex_left
84 RT__Reticular_nucleus_of_the_thalamus_left
85 LH__Lateral_habenula_left
86 MH__Medial_habenula_left
87 HY__Hypothalamus_left
88 MPN__Medial_preoptic_nucleus_left
89 AHN__Anterior_hypothalamic_nucleus_left
90 VMH__Ventromedial_hypothalamic_nucleus_left
91 PH__Posterior_hypothalamic_nucleus_left
92 MBO__Mammillary_body_left
93 SCH__Suprachiasmatic_nucleus_left
94 ARH__Arcuate_hypothalamic_nucleus_left
95 PVH__Paraventricular_hypothalamic_nucleus_left
96 LPO__Lateral_preoptic_area_left
97 TU__Tuberal_nucleus_left
98 LHA__Lateral_hypothalamic_area_left
99 STN__Subthalamic_nucleus_left
100 ZI__Zona_incerta_left
101 SCs__Superior_colliculus__sensory_related_left
102 SCm__Superior_colliculus__motor_related_left
103 IC__Inferior_colliculus_left
104 ICc__Inferior_colliculus__central_nucleus_left
105 PBG__Parabigeminal_nucleus_left
106 PPN__Pedunculopontine_nucleus_left
107 PRT__Pretectal_region_left
108 IIIR__Oculomotor_region_left
109 PAG__Periaqueductal_gray_left
110 RN__Red_nucleus_left
111 MRN__Midbrain_reticular_nucleus_left
112 CUN__Cuneiform_nucleus_left
113 IPN__Interpeduncular_nucleus_left
114 VTA__Ventral_tegmental_area_left
115 SNc__Substantia_nigra__compact_part_left
116 SNr__Substantia_nigra__reticular_part_left
117 DR__Dorsal_nucleus_raphe_left
118 P__Pons_left
119 NLL__Nucleus_of_the_lateral_lemniscus_left
120 SOC__Superior_olivary_complex_left
121 PB__Parabrachial_nucleus_left
122 PSV__Principal_sensory_nucleus_of_the_trigeminal_left
123 PCG__Pontine_central_gray_left
124 PG__Pontine_gray_left
125 VMc__Trigeminal_motor_complex_left
126 VII__Facial_motor_nucleus_left
127 DTN__Dorsal_tegmental_nucleus_left
128 LDT__Laterodorsal_tegmental_nucleus_left
129 TRN__Tegmental_reticular_nucleus_left
130 PRF__Pontine_reticular_formation_left
131 RVC__Raphe_ventral_complex_left
132 HEM__Hemispheric_regions_left
133 VERM__Vermal_regions_left
134 PFL__Paraflocculus_left
135 FLNOD__Floccular_nodular_region_left
136 DN__Dentate_nucleus_left
137 IP__Interposed_nucleus_left
138 FN__Fastigial_nucleus_left
139 VeCB__Vestibulocerebellar_nucleus_left
140 NTB__Nucleus_of_the_trapezoid_body_left
141 SPVr__Spinal_nucleus_of_the_trigeminal_region_left
142 NTS__Nucleus_of_the_solitary_tract_left
143 DCO__Dorsal_cochlear_nucleus_left
144 VCO__Ventral_cochlear_nucleus_left
145 VNC__Vestibular_nuclei_left
146 SPIV__Spinal_vestibular_nucleus_left
147 DCN__Dorsal_column_nuclei_left
148 IO__Inferior_olivary_complex_left
149 PHY__Perihypoglossal_nuclei_left
150 DMX__Dorsal_motor_nucleus_of_the_vagus_nerve_left
151 XII__Hypoglossal_nucleus_left
152 MRz__Medullary_reticular_zone_left
153 IRN__Intermediate_reticular_nucleus_left
154 MY-sat__Medulla__raphe__behavioral_state_related_left
155 fiber_tracts__fiber_tracts_left
156 cc__corpus_callosum_left
157 cing__cingulum_bundle_left
158 ac__anterior_commissure_left
159 optc__optic_tract_and_chiasm_left
160 dhc__dorsal_hippocampal_commissure_left
161 fi__fimbria_left
162 fx__columns_of_the_fornix_left
163 st__stria_terminalis_left
164 lfbst__thalamus_related_left
165 mfb__medial_forebrain_bundle_left
166 fr__fasciculus_retroflexus_left
167 pc__posterior_commissure_left
168 cst__corticospinal_tract_left
169 ml__medial_lemniscus_left
170 ll__lateral_lemniscus_left
171 mlf__medial_longitudinal_fascicle_left
172 scp__superior_cerebelar_peduncles_left
173 icp__inferior_cerebellar_peduncle_left
174 Vn__Trigeminal_nerve_left
175 cVIIIn__cochlear_nerve_left
176 VL__lateral_ventricle_left
177 V3__third_ventricle_left
178 V4__fourth_ventricle_left
179 AQ__cerebral_aqueduct_left
180 Brain__Whole_brain__root__left
1001 CH__Cerebrum_right
1002 grey__Basic_cell_groups_and_regions_right
1003 OB__Olfactory_bulb_right
1004 AON__Anterior_olfactory_nucleus_right
1005 FRP__Frontal_pole__cerebral_cortex_right
1006 ORB__Orbital_area_right
1007 PL__Prelimbic_area_right
1008 ILA__Infralimbic_area_right
1009 ACA__Anterior_cingulate_area_right
1010 AI__Agranular_insular_area_right
1011 GU__Gustatory_areas_right
1012 PIR__Piriform_area_right
1013 VISC__Visceral_area_right
1014 MOp__Primary_motor_area_right
1015 MOs__Secondary_motor_area_right
1016 SSp__Primary_somatosensory_area_right
1017 SSp-bfd__Primary_somatosensory_area__barrel_field_right
1018 SSs__Supplemental_somatosensory_area_right
1019 PTLp__Posterior_parietal_association_areas_right
1020 AUD__Auditory_areas_right
1021 TEa__Temporal_association_areas_right
1022 ECT__Ectorhinal_area_right
1023 PERI__Perirhinal_area_right
1024 RSP__Retrosplenial_area_right
1025 VIS__Visual_areas_right
1026 VISp__Primary_visual_area_right
1027 ENT__Entorhinal_area_right
1028 SUBR__Subicular_region_right
1029 HI__Hippocampus_right
1030 HIP__Hippocampal_region_right
1031 CA1__Field_CA1_right
1032 CA3__Field_CA3_right
1033 DG__Dentate_gyrus_right
1034 DG-sg__Dentate_gyrus__granule_cell_layer_right
1035 DG-po__Dentate_gyrus__polymorph_layer_right
1036 CLA__Claustrum_right
1037 CEA__Central_amygdalar_nucleus_right
1038 sAMY__Striatum-like_amygdalar_nuclei_right
1039 MEA__Medial_amygdalar_nucleus_right
1040 LA__Lateral_amygdalar_nucleus_right
1041 BLA__Basolateral_amygdalar_nucleus_right
1042 BMA__Basomedial_amygdalar_nucleus_right
1043 PA__Posterior_amygdalar_nucleus_right
1044 COAz__Cortical_amygdalar_zones_right
1045 EP__Endopiriform_nucleus_right
1046 STR__Striatum_right
1047 STRd__Striatum_dorsal_region_right
1048 ACB__Nucleus_accumbens_right
1049 FS__Fundus_of_striatum_right
1050 OT__Olfactory_tubercle_right
1051 GPe__Globus_pallidus__external_segment_right
1052 GPi__Globus_pallidus__internal_segment_right
1053 SI__Substantia_innominata_right
1054 MSC__Medial_septal_complex_right
1055 LS__Lateral_septal_nucleus_right
1056 BST__Bed_nuclei_of_the_stria_terminalis_right
1057 MA__Magnocellular_nucleus__Meynert__right
1058 TH__Thalamus_right
1059 AM__Anteromedial_nucleus_right
1060 AD__Anterodorsal_nucleus_right
1061 AV__Anteroventral_nucleus_of_thalamus_right
1062 LD__Lateral_dorsal_nucleus_of_the_thalamus_right
1063 VAL__Ventral_anterior-lateral_complex_of_the_thalamus_right
1064 VM__Ventral_medial_nucleus_of_the_thalamus_right
1065 VP__Ventral_posterior_complex_of_the_thalamus_right
1066 VPM__Ventral_posteromedial_nucleus_of_the_thalamus_right
1067 VPL__Ventral_posterolateral_nucleus_of_the_thalamus_right
1068 PT__Parataenial_nucleus_right
1069 PVT__Paraventricular_nucleus_of_the_thalamus_right
1070 RE__Nucleus_of_reuniens_right
1071 CL__Central_lateral_nucleus_of_the_thalamus_right
1072 CM__Central_medial_nucleus_of_the_thalamus_right
1073 PCN__Paracentral_nucleus_right
1074 PF__Parafascicular_nucleus_right
1075 PIL__Posterior_intralaminar_thalamic_nucleus_right
1076 MD__Mediodorsal_nucleus_of_thalamus_right
1077 LP__Lateral_posterior_nucleus_of_the_thalamus_right
1078 PO__Posterior_complex_of_the_thalamus_right
1079 MGd__Medial_geniculate_complex__dorsal_part_right
1080 MGv__Medial_geniculate_complex__ventral_part_right
1081 MGm__Medial_geniculate_complex__medial_part_right
1082 LGd__Dorsal_part_of_the_lateral_geniculate_complex_right
1083 LGv__Ventral_part_of_the_lateral_geniculate_complex_right
1084 RT__Reticular_nucleus_of_the_thalamus_right
1085 LH__Lateral_habenula_right
1086 MH__Medial_habenula_right
1087 HY__Hypothalamus_right
1088 MPN__Medial_preoptic_nucleus_right
1089 AHN__Anterior_hypothalamic_nucleus_right
1090 VMH__Ventromedial_hypothalamic_nucleus_right
1091 PH__Posterior_hypothalamic_nucleus_right
1092 MBO__Mammillary_body_right
1093 SCH__Suprachiasmatic_nucleus_right
1094 ARH__Arcuate_hypothalamic_nucleus_right
1095 PVH__Paraventricular_hypothalamic_nucleus_right
1096 LPO__Lateral_preoptic_area_right
1097 TU__Tuberal_nucleus_right
1098 LHA__Lateral_hypothalamic_area_right
1099 STN__Subthalamic_nucleus_right
1100 ZI__Zona_incerta_right
1101 SCs__Superior_colliculus__sensory_related_right
1102 SCm__Superior_colliculus__motor_related_right
1103 IC__Inferior_colliculus_right
1104 ICc__Inferior_colliculus__central_nucleus_right
1105 PBG__Parabigeminal_nucleus_right
1106 PPN__Pedunculopontine_nucleus_right
1107 PRT__Pretectal_region_right
1108 IIIR__Oculomotor_region_right
1109 PAG__Periaqueductal_gray_right
1110 RN__Red_nucleus_right
1111 MRN__Midbrain_reticular_nucleus_right
1112 CUN__Cuneiform_nucleus_right
1113 IPN__Interpeduncular_nucleus_right
1114 VTA__Ventral_tegmental_area_right
1115 SNc__Substantia_nigra__compact_part_right
1116 SNr__Substantia_nigra__reticular_part_right
1117 DR__Dorsal_nucleus_raphe_right
1118 P__Pons_right
1119 NLL__Nucleus_of_the_lateral_lemniscus_right
1120 SOC__Superior_olivary_complex_right
1121 PB__Parabrachial_nucleus_right
1122 PSV__Principal_sensory_nucleus_of_the_trigeminal_right
1123 PCG__Pontine_central_gray_right
1124 PG__Pontine_gray_right
1125 VMc__Trigeminal_motor_complex_right
1126 VII__Facial_motor_nucleus_right
1127 DTN__Dorsal_tegmental_nucleus_right
1128 LDT__Laterodorsal_tegmental_nucleus_right
1129 TRN__Tegmental_reticular_nucleus_right
1130 PRF__Pontine_reticular_formation_right
1131 RVC__Raphe_ventral_complex_right
1132 HEM__Hemispheric_regions_right
1133 VERM__Vermal_regions_right
1134 PFL__Paraflocculus_right
1135 FLNOD__Floccular_nodular_region_right
1136 DN__Dentate_nucleus_right
1137 IP__Interposed_nucleus_right
1138 FN__Fastigial_nucleus_right
1139 VeCB__Vestibulocerebellar_nucleus_right
1140 NTB__Nucleus_of_the_trapezoid_body_right
1141 SPVr__Spinal_nucleus_of_the_trigeminal_region_right
1142 NTS__Nucleus_of_the_solitary_tract_right
1143 DCO__Dorsal_cochlear_nucleus_right
1144 VCO__Ventral_cochlear_nucleus_right
1145 VNC__Vestibular_nuclei_right
1146 SPIV__Spinal_vestibular_nucleus_right
1147 DCN__Dorsal_column_nuclei_right
1148 IO__Inferior_olivary_complex_right
1149 PHY__Perihypoglossal_nuclei_right
1150 DMX__Dorsal_motor_nucleus_of_the_vagus_nerve_right
1151 XII__Hypoglossal_nucleus_right
1152 MRz__Medullary_reticular_zone_right
1153 IRN__Intermediate_reticular_nucleus_right
1154 MY-sat__Medulla__raphe__behavioral_state_related_right
1155 fiber_tracts__fiber_tracts_right
1156 cc__corpus_callosum_right
1157 cing__cingulum_bundle_right
1158 ac__anterior_commissure_right
1159 optc__optic_tract_and_chiasm_right
1160 dhc__dorsal_hippocampal_commissure_right
1161 fi__fimbria_right
1162 fx__columns_of_the_fornix_right
1163 st__stria_terminalis_right
1164 lfbst__thalamus_related_right
1165 mfb__medial_forebrain_bundle_right
1166 fr__fasciculus_retroflexus_right
1167 pc__posterior_commissure_right
1168 cst__corticospinal_tract_right
1169 ml__medial_lemniscus_right
1170 ll__lateral_lemniscus_right
1171 mlf__medial_longitudinal_fascicle_right
1172 scp__superior_cerebelar_peduncles_right
1173 icp__inferior_cerebellar_peduncle_right
1174 Vn__Trigeminal_nerve_right
1175 cVIIIn__cochlear_nerve_right
1176 VL__lateral_ventricle_right
1177 V3__third_ventricle_right
1178 V4__fourth_ventricle_right
1179 AQ__cerebral_aqueduct_right
1180 Brain__Whole_brain__root__right