Higher-level input files preparation

/usr/share/fsl/5.0/bin/featregapply /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-1.feat

/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in example_func -out frgrot_TtwtbA -applyxfm -init reg/example_func2standard.mat -interp spline -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in mean_func -out frgrot_SUl24j -applyxfm -init reg/example_func2standard.mat -interp spline -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope1 -out frgrot_3dGoyV -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope10 -out frgrot_vhfF6g -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope11 -out frgrot_vxkPEF -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope12 -out frgrot_36324T -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope13 -out frgrot_eaT0hg -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope14 -out frgrot_l1OoGC -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope15 -out frgrot_ak6PgW -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope2 -out frgrot_yngpnu -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope3 -out frgrot_5cM40N -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope4 -out frgrot_AcbRMb -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope5 -out frgrot_eXuBsE -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope6 -out frgrot_PyGgSQ -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope7 -out frgrot_u0Howk -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope8 -out frgrot_0nnkEG -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope9 -out frgrot_eMvEUV -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope1 -out frgrot_y2gYlo -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope10 -out frgrot_KRy5SP -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope11 -out frgrot_AScoqc -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope12 -out frgrot_lSTmFI -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope13 -out frgrot_wAssxX -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope14 -out frgrot_4WorIn -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope15 -out frgrot_KiV2KM -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope2 -out frgrot_t2VAV0 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope3 -out frgrot_7g6SNl -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope4 -out frgrot_LrbevM -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope5 -out frgrot_s4pD4b -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope6 -out frgrot_wKPUzI -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope7 -out frgrot_aQB5x7 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope8 -out frgrot_2kcLNs -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope9 -out frgrot_Yo8oqY -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in mask -out frgrot_upHeHk -applyxfm -init reg/example_func2standard.mat -interp nearestneighbour -datatype char


/usr/share/fsl/5.0/bin/featregapply /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-2.feat

/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in example_func -out frgrot_4gmNTN -applyxfm -init reg/example_func2standard.mat -interp spline -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in mean_func -out frgrot_8T0FEx -applyxfm -init reg/example_func2standard.mat -interp spline -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope1 -out frgrot_t4Djo9 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope10 -out frgrot_DyiMfu -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope11 -out frgrot_lDQ6QS -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope12 -out frgrot_wjdMOi -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope13 -out frgrot_rPWHEJ -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope14 -out frgrot_U2SqW3 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope15 -out frgrot_ON6Yjk -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope2 -out frgrot_VSIWPK -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope3 -out frgrot_ufssqb -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope4 -out frgrot_060Tzq -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope5 -out frgrot_VwAGsK -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope6 -out frgrot_mYB509 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope7 -out frgrot_MXUqbn -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope8 -out frgrot_XGvALP -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope9 -out frgrot_rTVRZe -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope1 -out frgrot_LerUnu -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope10 -out frgrot_yKBkQS -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope11 -out frgrot_VxY08g -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope12 -out frgrot_EYDXMq -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope13 -out frgrot_hQNYtP -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope14 -out frgrot_UQUVSe -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope15 -out frgrot_5PHxDr -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope2 -out frgrot_Mj1viS -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope3 -out frgrot_FMM0Si -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope4 -out frgrot_1wyhnx -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope5 -out frgrot_xJ5IQX -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope6 -out frgrot_oDF2Li -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope7 -out frgrot_TSFnhy -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope8 -out frgrot_Ngeb20 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope9 -out frgrot_1sAwlt -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in mask -out frgrot_3xvlyH -applyxfm -init reg/example_func2standard.mat -interp nearestneighbour -datatype char


/usr/share/fsl/5.0/bin/featregapply /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-3.feat

/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in example_func -out frgrot_5p4929 -applyxfm -init reg/example_func2standard.mat -interp spline -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in mean_func -out frgrot_8mqkwW -applyxfm -init reg/example_func2standard.mat -interp spline -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope1 -out frgrot_S041ry -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope10 -out frgrot_26ENKT -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope11 -out frgrot_ELByhf -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope12 -out frgrot_pLTLdE -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope13 -out frgrot_TdFYFP -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope14 -out frgrot_c84lmk -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope15 -out frgrot_jy7BHI -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope2 -out frgrot_W7dWKY -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope3 -out frgrot_A3dGrw -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope4 -out frgrot_yN2FiH -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope5 -out frgrot_uPW0lc -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope6 -out frgrot_YHHwTB -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope7 -out frgrot_nEq0wR -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope8 -out frgrot_O63cQb -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope9 -out frgrot_qvZSFB -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope1 -out frgrot_g6PrlS -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope10 -out frgrot_V9RyUk -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope11 -out frgrot_hqKsbH -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope12 -out frgrot_DUOMx4 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope13 -out frgrot_f0JC0t -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope14 -out frgrot_PmyRQS -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope15 -out frgrot_e8Ww34 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope2 -out frgrot_UbAV5t -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope3 -out frgrot_fxX1KS -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope4 -out frgrot_PIfIh2 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope5 -out frgrot_m5svaq -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope6 -out frgrot_Qh954O -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope7 -out frgrot_SmaSv5 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope8 -out frgrot_kjkLft -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope9 -out frgrot_tP3pxQ -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in mask -out frgrot_UmfHt4 -applyxfm -init reg/example_func2standard.mat -interp nearestneighbour -datatype char


/usr/share/fsl/5.0/bin/featregapply /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-4.feat

/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in example_func -out frgrot_oyV8tx -applyxfm -init reg/example_func2standard.mat -interp spline -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in mean_func -out frgrot_YIRHDl -applyxfm -init reg/example_func2standard.mat -interp spline -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope1 -out frgrot_UNgDw2 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope10 -out frgrot_g2DZXm -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope11 -out frgrot_I4erLI -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope12 -out frgrot_p3o4g1 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope13 -out frgrot_Ra8h3r -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope14 -out frgrot_9qmF3N -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope15 -out frgrot_5MLZD7 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope2 -out frgrot_8OBA3z -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope3 -out frgrot_7afAFU -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope4 -out frgrot_uYWiCf -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope5 -out frgrot_1p6PwD -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope6 -out frgrot_ERidl3 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope7 -out frgrot_q2Edej -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope8 -out frgrot_9FNfS7 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope9 -out frgrot_Bmk3wq -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope1 -out frgrot_0TLPGO -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope10 -out frgrot_9Ekzkf -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope11 -out frgrot_FPBPgs -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope12 -out frgrot_Y8FIuN -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope13 -out frgrot_3RQiac -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope14 -out frgrot_wLSe4m -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope15 -out frgrot_Myjs2N -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope2 -out frgrot_ht9Z78 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope3 -out frgrot_Nnd7xr -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope4 -out frgrot_Nj3N9O -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope5 -out frgrot_nxxYTa -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope6 -out frgrot_CRlFgr -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope7 -out frgrot_Ri6UZY -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope8 -out frgrot_ZPwFWk -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope9 -out frgrot_qoO5NC -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in mask -out frgrot_No8CBe -applyxfm -init reg/example_func2standard.mat -interp nearestneighbour -datatype char


/usr/share/fsl/5.0/bin/fslmaths /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-1.feat/reg/standard bg_image

/usr/share/fsl/5.0/bin/fslmerge -t mask  /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-1.feat/reg_standard/mask /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-2.feat/reg_standard/mask /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-3.feat/reg_standard/mask /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-4.feat/reg_standard/mask

mkdir -p inputreg

/usr/share/fsl/5.0/bin/fslmaths ../mask -mul 4 -Tmean masksum -odt short

/usr/share/fsl/5.0/bin/fslmaths masksum -thr 4 -add masksum masksum

/usr/share/fsl/5.0/bin/overlay 0 0 -c ../bg_image -a masksum 0.9 8 masksum_overlay

/usr/share/fsl/5.0/bin/slicer masksum_overlay -S 2 750 masksum_overlay.png

/usr/share/fsl/5.0/bin/fslmaths masksum -mul 0 maskunique

/usr/share/fsl/5.0/bin/fslmaths /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-1.feat/reg_standard/mask -mul -1 -add 1 -mul 1 -add maskunique maskunique

/usr/share/fsl/5.0/bin/fslmaths /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-2.feat/reg_standard/mask -mul -1 -add 1 -mul 2 -add maskunique maskunique

/usr/share/fsl/5.0/bin/fslmaths /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-3.feat/reg_standard/mask -mul -1 -add 1 -mul 3 -add maskunique maskunique

/usr/share/fsl/5.0/bin/fslmaths /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-4.feat/reg_standard/mask -mul -1 -add 1 -mul 4 -add maskunique maskunique

/usr/share/fsl/5.0/bin/fslmaths masksum -thr 3 -uthr 3 -bin -mul maskunique maskunique

/usr/share/fsl/5.0/bin/overlay 0 0 ../bg_image -a maskunique 0.9 4 maskunique_overlay

/usr/share/fsl/5.0/bin/slicer maskunique_overlay -S 2 750 maskunique_overlay.png

/bin/cp /usr/share/fsl/5.0/etc/luts/ramp.gif .ramp.gif

/usr/share/fsl/5.0/bin/fslmaths mask -Tmin mask

/usr/share/fsl/5.0/bin/fslmerge -t mean_func  /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-1.feat/reg_standard/mean_func /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-2.feat/reg_standard/mean_func /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-3.feat/reg_standard/mean_func /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-4.feat/reg_standard/mean_func

/usr/share/fsl/5.0/bin/fslmaths mean_func -Tmean mean_func

/usr/share/fsl/5.0/bin/fslmerge -t cope1  /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-1.feat/reg_standard/stats/cope1 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-2.feat/reg_standard/stats/cope1 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-3.feat/reg_standard/stats/cope1 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-4.feat/reg_standard/stats/cope1

/usr/share/fsl/5.0/bin/fslmaths cope1 -mas mask cope1

printf '0.21060815000000002 ' >> design.lcon

/usr/share/fsl/5.0/bin/fslmerge -t varcope1  /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-1.feat/reg_standard/stats/varcope1 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-2.feat/reg_standard/stats/varcope1 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-3.feat/reg_standard/stats/varcope1 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-4.feat/reg_standard/stats/varcope1

/usr/share/fsl/5.0/bin/fslmaths varcope1 -mas mask varcope1

/usr/share/fsl/5.0/bin/fslmerge -t cope2  /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-1.feat/reg_standard/stats/cope2 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-2.feat/reg_standard/stats/cope2 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-3.feat/reg_standard/stats/cope2 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-4.feat/reg_standard/stats/cope2

/usr/share/fsl/5.0/bin/fslmaths cope2 -mas mask cope2

printf '0.2332474 ' >> design.lcon

/usr/share/fsl/5.0/bin/fslmerge -t varcope2  /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-1.feat/reg_standard/stats/varcope2 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-2.feat/reg_standard/stats/varcope2 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-3.feat/reg_standard/stats/varcope2 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-4.feat/reg_standard/stats/varcope2

/usr/share/fsl/5.0/bin/fslmaths varcope2 -mas mask varcope2

/usr/share/fsl/5.0/bin/fslmerge -t cope3  /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-1.feat/reg_standard/stats/cope3 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-2.feat/reg_standard/stats/cope3 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-3.feat/reg_standard/stats/cope3 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-4.feat/reg_standard/stats/cope3

/usr/share/fsl/5.0/bin/fslmaths cope3 -mas mask cope3

printf '0.29644267500000004 ' >> design.lcon

/usr/share/fsl/5.0/bin/fslmerge -t varcope3  /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-1.feat/reg_standard/stats/varcope3 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-2.feat/reg_standard/stats/varcope3 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-3.feat/reg_standard/stats/varcope3 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-4.feat/reg_standard/stats/varcope3

/usr/share/fsl/5.0/bin/fslmaths varcope3 -mas mask varcope3

/usr/share/fsl/5.0/bin/fslmerge -t cope4  /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-1.feat/reg_standard/stats/cope4 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-2.feat/reg_standard/stats/cope4 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-3.feat/reg_standard/stats/cope4 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-4.feat/reg_standard/stats/cope4

/usr/share/fsl/5.0/bin/fslmaths cope4 -mas mask cope4

printf '0.23453907499999999 ' >> design.lcon

/usr/share/fsl/5.0/bin/fslmerge -t varcope4  /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-1.feat/reg_standard/stats/varcope4 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-2.feat/reg_standard/stats/varcope4 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-3.feat/reg_standard/stats/varcope4 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-4.feat/reg_standard/stats/varcope4

/usr/share/fsl/5.0/bin/fslmaths varcope4 -mas mask varcope4

/usr/share/fsl/5.0/bin/fslmerge -t cope5  /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-1.feat/reg_standard/stats/cope5 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-2.feat/reg_standard/stats/cope5 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-3.feat/reg_standard/stats/cope5 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-4.feat/reg_standard/stats/cope5

/usr/share/fsl/5.0/bin/fslmaths cope5 -mas mask cope5

printf '0.232884125 ' >> design.lcon

/usr/share/fsl/5.0/bin/fslmerge -t varcope5  /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-1.feat/reg_standard/stats/varcope5 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-2.feat/reg_standard/stats/varcope5 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-3.feat/reg_standard/stats/varcope5 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-4.feat/reg_standard/stats/varcope5

/usr/share/fsl/5.0/bin/fslmaths varcope5 -mas mask varcope5

/usr/share/fsl/5.0/bin/fslmerge -t cope6  /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-1.feat/reg_standard/stats/cope6 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-2.feat/reg_standard/stats/cope6 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-3.feat/reg_standard/stats/cope6 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-4.feat/reg_standard/stats/cope6

/usr/share/fsl/5.0/bin/fslmaths cope6 -mas mask cope6

printf '0.232884125 ' >> design.lcon

/usr/share/fsl/5.0/bin/fslmerge -t varcope6  /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-1.feat/reg_standard/stats/varcope6 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-2.feat/reg_standard/stats/varcope6 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-3.feat/reg_standard/stats/varcope6 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-4.feat/reg_standard/stats/varcope6

/usr/share/fsl/5.0/bin/fslmaths varcope6 -mas mask varcope6

/usr/share/fsl/5.0/bin/fslmerge -t cope7  /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-1.feat/reg_standard/stats/cope7 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-2.feat/reg_standard/stats/cope7 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-3.feat/reg_standard/stats/cope7 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-4.feat/reg_standard/stats/cope7

/usr/share/fsl/5.0/bin/fslmaths cope7 -mas mask cope7

printf '0.5789040000000001 ' >> design.lcon

/usr/share/fsl/5.0/bin/fslmerge -t varcope7  /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-1.feat/reg_standard/stats/varcope7 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-2.feat/reg_standard/stats/varcope7 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-3.feat/reg_standard/stats/varcope7 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-4.feat/reg_standard/stats/varcope7

/usr/share/fsl/5.0/bin/fslmaths varcope7 -mas mask varcope7

/usr/share/fsl/5.0/bin/fslmerge -t cope8  /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-1.feat/reg_standard/stats/cope8 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-2.feat/reg_standard/stats/cope8 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-3.feat/reg_standard/stats/cope8 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-4.feat/reg_standard/stats/cope8

/usr/share/fsl/5.0/bin/fslmaths cope8 -mas mask cope8

printf '0.5879568 ' >> design.lcon

/usr/share/fsl/5.0/bin/fslmerge -t varcope8  /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-1.feat/reg_standard/stats/varcope8 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-2.feat/reg_standard/stats/varcope8 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-3.feat/reg_standard/stats/varcope8 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-4.feat/reg_standard/stats/varcope8

/usr/share/fsl/5.0/bin/fslmaths varcope8 -mas mask varcope8

/usr/share/fsl/5.0/bin/fslmerge -t cope9  /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-1.feat/reg_standard/stats/cope9 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-2.feat/reg_standard/stats/cope9 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-3.feat/reg_standard/stats/cope9 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-4.feat/reg_standard/stats/cope9

/usr/share/fsl/5.0/bin/fslmaths cope9 -mas mask cope9

printf '0.5829851 ' >> design.lcon

/usr/share/fsl/5.0/bin/fslmerge -t varcope9  /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-1.feat/reg_standard/stats/varcope9 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-2.feat/reg_standard/stats/varcope9 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-3.feat/reg_standard/stats/varcope9 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-4.feat/reg_standard/stats/varcope9

/usr/share/fsl/5.0/bin/fslmaths varcope9 -mas mask varcope9

/usr/share/fsl/5.0/bin/fslmerge -t cope10  /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-1.feat/reg_standard/stats/cope10 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-2.feat/reg_standard/stats/cope10 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-3.feat/reg_standard/stats/cope10 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-4.feat/reg_standard/stats/cope10

/usr/share/fsl/5.0/bin/fslmaths cope10 -mas mask cope10

printf '1.15525725 ' >> design.lcon

/usr/share/fsl/5.0/bin/fslmerge -t varcope10  /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-1.feat/reg_standard/stats/varcope10 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-2.feat/reg_standard/stats/varcope10 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-3.feat/reg_standard/stats/varcope10 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-4.feat/reg_standard/stats/varcope10

/usr/share/fsl/5.0/bin/fslmaths varcope10 -mas mask varcope10

/usr/share/fsl/5.0/bin/fslmerge -t cope11  /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-1.feat/reg_standard/stats/cope11 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-2.feat/reg_standard/stats/cope11 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-3.feat/reg_standard/stats/cope11 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-4.feat/reg_standard/stats/cope11

/usr/share/fsl/5.0/bin/fslmaths cope11 -mas mask cope11

printf '1.13916125 ' >> design.lcon

/usr/share/fsl/5.0/bin/fslmerge -t varcope11  /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-1.feat/reg_standard/stats/varcope11 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-2.feat/reg_standard/stats/varcope11 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-3.feat/reg_standard/stats/varcope11 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-4.feat/reg_standard/stats/varcope11

/usr/share/fsl/5.0/bin/fslmaths varcope11 -mas mask varcope11

/usr/share/fsl/5.0/bin/fslmerge -t cope12  /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-1.feat/reg_standard/stats/cope12 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-2.feat/reg_standard/stats/cope12 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-3.feat/reg_standard/stats/cope12 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-4.feat/reg_standard/stats/cope12

/usr/share/fsl/5.0/bin/fslmaths cope12 -mas mask cope12

printf '0.5688610749999999 ' >> design.lcon

/usr/share/fsl/5.0/bin/fslmerge -t varcope12  /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-1.feat/reg_standard/stats/varcope12 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-2.feat/reg_standard/stats/varcope12 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-3.feat/reg_standard/stats/varcope12 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-4.feat/reg_standard/stats/varcope12

/usr/share/fsl/5.0/bin/fslmaths varcope12 -mas mask varcope12

/usr/share/fsl/5.0/bin/fslmerge -t cope13  /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-1.feat/reg_standard/stats/cope13 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-2.feat/reg_standard/stats/cope13 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-3.feat/reg_standard/stats/cope13 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-4.feat/reg_standard/stats/cope13

/usr/share/fsl/5.0/bin/fslmaths cope13 -mas mask cope13

printf '1.155315 ' >> design.lcon

/usr/share/fsl/5.0/bin/fslmerge -t varcope13  /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-1.feat/reg_standard/stats/varcope13 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-2.feat/reg_standard/stats/varcope13 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-3.feat/reg_standard/stats/varcope13 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-4.feat/reg_standard/stats/varcope13

/usr/share/fsl/5.0/bin/fslmaths varcope13 -mas mask varcope13

/usr/share/fsl/5.0/bin/fslmerge -t cope14  /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-1.feat/reg_standard/stats/cope14 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-2.feat/reg_standard/stats/cope14 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-3.feat/reg_standard/stats/cope14 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-4.feat/reg_standard/stats/cope14

/usr/share/fsl/5.0/bin/fslmaths cope14 -mas mask cope14

printf '1.137175 ' >> design.lcon

/usr/share/fsl/5.0/bin/fslmerge -t varcope14  /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-1.feat/reg_standard/stats/varcope14 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-2.feat/reg_standard/stats/varcope14 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-3.feat/reg_standard/stats/varcope14 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-4.feat/reg_standard/stats/varcope14

/usr/share/fsl/5.0/bin/fslmaths varcope14 -mas mask varcope14

/usr/share/fsl/5.0/bin/fslmerge -t cope15  /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-1.feat/reg_standard/stats/cope15 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-2.feat/reg_standard/stats/cope15 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-3.feat/reg_standard/stats/cope15 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-4.feat/reg_standard/stats/cope15

/usr/share/fsl/5.0/bin/fslmaths cope15 -mas mask cope15

printf '1.1366855 ' >> design.lcon

/usr/share/fsl/5.0/bin/fslmerge -t varcope15  /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-1.feat/reg_standard/stats/varcope15 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-2.feat/reg_standard/stats/varcope15 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-3.feat/reg_standard/stats/varcope15 /home/data/psyinf/forrest_gump/collection/visloc/sub-02/run-4.feat/reg_standard/stats/varcope15

/usr/share/fsl/5.0/bin/fslmaths varcope15 -mas mask varcope15