Higher-level input files preparation

/usr/share/fsl/5.0/bin/featregapply /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-1.feat

/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in example_func -out frgrot_rkBOfy -applyxfm -init reg/example_func2standard.mat -interp spline -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in mean_func -out frgrot_lgEjbc -applyxfm -init reg/example_func2standard.mat -interp spline -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope1 -out frgrot_09XcVO -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope10 -out frgrot_GHF4kg -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope11 -out frgrot_A5vKwA -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope12 -out frgrot_jNVsmO -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope13 -out frgrot_NCYYMe -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope14 -out frgrot_pmFFSH -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope15 -out frgrot_r5JKfZ -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope2 -out frgrot_ZNowhk -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope3 -out frgrot_MRFi4H -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope4 -out frgrot_bNRvVS -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope5 -out frgrot_q4RD2g -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope6 -out frgrot_irknvK -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope7 -out frgrot_E2Bf9U -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope8 -out frgrot_psPGEj -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope9 -out frgrot_JQxZ2P -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope1 -out frgrot_hvzYVe -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope10 -out frgrot_SI5clL -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope11 -out frgrot_0Nk1f0 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope12 -out frgrot_7WmTBo -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope13 -out frgrot_7IJjmL -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope14 -out frgrot_7ed9zX -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope15 -out frgrot_IMxAsj -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope2 -out frgrot_LCPGZK -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope3 -out frgrot_AiaFob -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope4 -out frgrot_zbGsyI -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope5 -out frgrot_thwnA6 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope6 -out frgrot_0DnXRw -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope7 -out frgrot_JrBB7V -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope8 -out frgrot_8n1ZBh -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope9 -out frgrot_4ko9sK -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in mask -out frgrot_aeVOb8 -applyxfm -init reg/example_func2standard.mat -interp nearestneighbour -datatype char


/usr/share/fsl/5.0/bin/featregapply /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-2.feat

/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in example_func -out frgrot_SrWxPo -applyxfm -init reg/example_func2standard.mat -interp spline -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in mean_func -out frgrot_msIyi5 -applyxfm -init reg/example_func2standard.mat -interp spline -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope1 -out frgrot_vuCpRN -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope10 -out frgrot_4sd1gv -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope11 -out frgrot_4wuh5N -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope12 -out frgrot_Zt5qCh -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope13 -out frgrot_aT5VQs -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope14 -out frgrot_kvCzNP -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope15 -out frgrot_Bcna8b -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope2 -out frgrot_LEE5zs -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope3 -out frgrot_dcvb0M -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope4 -out frgrot_xqlmBe -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope5 -out frgrot_sneKXx -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope6 -out frgrot_nIo2f0 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope7 -out frgrot_kKKGZi -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope8 -out frgrot_Og9Obz -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope9 -out frgrot_JMCSzU -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope1 -out frgrot_Qzp0Lj -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope10 -out frgrot_SIO2Xw -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope11 -out frgrot_tYHqGS -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope12 -out frgrot_tc3Yfd -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope13 -out frgrot_zGSGTo -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope14 -out frgrot_WXUbVQ -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope15 -out frgrot_QVnLVi -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope2 -out frgrot_59yxCt -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope3 -out frgrot_kZwDlP -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope4 -out frgrot_tqWQWd -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope5 -out frgrot_cUbbJw -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope6 -out frgrot_LAhTRU -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope7 -out frgrot_VFjgJd -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope8 -out frgrot_KA2LEq -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope9 -out frgrot_BVIcnM -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in mask -out frgrot_WFL7lc -applyxfm -init reg/example_func2standard.mat -interp nearestneighbour -datatype char


/usr/share/fsl/5.0/bin/featregapply /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-3.feat

/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in example_func -out frgrot_15GhKy -applyxfm -init reg/example_func2standard.mat -interp spline -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in mean_func -out frgrot_rYMWuu -applyxfm -init reg/example_func2standard.mat -interp spline -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope1 -out frgrot_YJcs75 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope10 -out frgrot_x8qRwu -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope11 -out frgrot_pEcYNH -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope12 -out frgrot_ODCsb4 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope13 -out frgrot_hlbdep -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope14 -out frgrot_aSkujA -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope15 -out frgrot_QQiE8Y -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope2 -out frgrot_YAf0oy -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope3 -out frgrot_Iv49MO -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope4 -out frgrot_AjjzFh -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope5 -out frgrot_tPW1CC -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope6 -out frgrot_C8RWHW -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope7 -out frgrot_J8kJ8i -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope8 -out frgrot_CsJBOO -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope9 -out frgrot_ZT0Du3 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope1 -out frgrot_0dFnEv -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope10 -out frgrot_2RcMCL -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope11 -out frgrot_q7l6Yd -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope12 -out frgrot_CJ4kaB -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope13 -out frgrot_3rlNVK -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope14 -out frgrot_2deM39 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope15 -out frgrot_VHlqIy -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope2 -out frgrot_DlNgRT -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope3 -out frgrot_vWobK7 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope4 -out frgrot_GDwGut -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope5 -out frgrot_HUU6tQ -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope6 -out frgrot_GVz5W5 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope7 -out frgrot_VoQ6aD -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope8 -out frgrot_s76PZS -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope9 -out frgrot_ASPHLe -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in mask -out frgrot_69jLDD -applyxfm -init reg/example_func2standard.mat -interp nearestneighbour -datatype char


/usr/share/fsl/5.0/bin/featregapply /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-4.feat

/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in example_func -out frgrot_qVx0HX -applyxfm -init reg/example_func2standard.mat -interp spline -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in mean_func -out frgrot_rtxbAM -applyxfm -init reg/example_func2standard.mat -interp spline -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope1 -out frgrot_is5aGl -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope10 -out frgrot_oK4p4H -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope11 -out frgrot_U5bDX4 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope12 -out frgrot_LmbkKo -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope13 -out frgrot_BvfX2J -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope14 -out frgrot_Kft2Y4 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope15 -out frgrot_5uuXSm -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope2 -out frgrot_ITjYFL -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope3 -out frgrot_bJNsl7 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope4 -out frgrot_xR2K9r -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope5 -out frgrot_5rmPdQ -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope6 -out frgrot_gYyAtb -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope7 -out frgrot_E2HALo -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope8 -out frgrot_U33pW7 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/cope9 -out frgrot_aCvt4p -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope1 -out frgrot_mufhaN -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope10 -out frgrot_WE4zO8 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope11 -out frgrot_EDhFgo -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope12 -out frgrot_TvksUI -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope13 -out frgrot_cQjwC3 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope14 -out frgrot_oKMQKf -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope15 -out frgrot_T6feFF -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope2 -out frgrot_PgWA84 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope3 -out frgrot_9IdwKk -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope4 -out frgrot_aUPfAF -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope5 -out frgrot_dYIhY1 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope6 -out frgrot_GmyHTq -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope7 -out frgrot_MOFzGI -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope8 -out frgrot_OybWb8 -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in stats/varcope9 -out frgrot_04InZp -applyxfm -init reg/example_func2standard.mat -interp trilinear -datatype float


/usr/share/fsl/5.0/bin/flirt -ref reg/standard -in mask -out frgrot_KayAaN -applyxfm -init reg/example_func2standard.mat -interp nearestneighbour -datatype char


/usr/share/fsl/5.0/bin/fslmaths /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-1.feat/reg/standard bg_image

/usr/share/fsl/5.0/bin/fslmerge -t mask  /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-1.feat/reg_standard/mask /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-2.feat/reg_standard/mask /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-3.feat/reg_standard/mask /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-4.feat/reg_standard/mask

mkdir -p inputreg

/usr/share/fsl/5.0/bin/fslmaths ../mask -mul 4 -Tmean masksum -odt short

/usr/share/fsl/5.0/bin/fslmaths masksum -thr 4 -add masksum masksum

/usr/share/fsl/5.0/bin/overlay 0 0 -c ../bg_image -a masksum 0.9 8 masksum_overlay

/usr/share/fsl/5.0/bin/slicer masksum_overlay -S 2 750 masksum_overlay.png

/usr/share/fsl/5.0/bin/fslmaths masksum -mul 0 maskunique

/usr/share/fsl/5.0/bin/fslmaths /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-1.feat/reg_standard/mask -mul -1 -add 1 -mul 1 -add maskunique maskunique

/usr/share/fsl/5.0/bin/fslmaths /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-2.feat/reg_standard/mask -mul -1 -add 1 -mul 2 -add maskunique maskunique

/usr/share/fsl/5.0/bin/fslmaths /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-3.feat/reg_standard/mask -mul -1 -add 1 -mul 3 -add maskunique maskunique

/usr/share/fsl/5.0/bin/fslmaths /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-4.feat/reg_standard/mask -mul -1 -add 1 -mul 4 -add maskunique maskunique

/usr/share/fsl/5.0/bin/fslmaths masksum -thr 3 -uthr 3 -bin -mul maskunique maskunique

/usr/share/fsl/5.0/bin/overlay 0 0 ../bg_image -a maskunique 0.9 4 maskunique_overlay

/usr/share/fsl/5.0/bin/slicer maskunique_overlay -S 2 750 maskunique_overlay.png

/bin/cp /usr/share/fsl/5.0/etc/luts/ramp.gif .ramp.gif

/usr/share/fsl/5.0/bin/fslmaths mask -Tmin mask

/usr/share/fsl/5.0/bin/fslmerge -t mean_func  /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-1.feat/reg_standard/mean_func /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-2.feat/reg_standard/mean_func /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-3.feat/reg_standard/mean_func /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-4.feat/reg_standard/mean_func

/usr/share/fsl/5.0/bin/fslmaths mean_func -Tmean mean_func

/usr/share/fsl/5.0/bin/fslmerge -t cope1  /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-1.feat/reg_standard/stats/cope1 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-2.feat/reg_standard/stats/cope1 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-3.feat/reg_standard/stats/cope1 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-4.feat/reg_standard/stats/cope1

/usr/share/fsl/5.0/bin/fslmaths cope1 -mas mask cope1

printf '0.210621775 ' >> design.lcon

/usr/share/fsl/5.0/bin/fslmerge -t varcope1  /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-1.feat/reg_standard/stats/varcope1 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-2.feat/reg_standard/stats/varcope1 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-3.feat/reg_standard/stats/varcope1 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-4.feat/reg_standard/stats/varcope1

/usr/share/fsl/5.0/bin/fslmaths varcope1 -mas mask varcope1

/usr/share/fsl/5.0/bin/fslmerge -t cope2  /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-1.feat/reg_standard/stats/cope2 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-2.feat/reg_standard/stats/cope2 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-3.feat/reg_standard/stats/cope2 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-4.feat/reg_standard/stats/cope2

/usr/share/fsl/5.0/bin/fslmaths cope2 -mas mask cope2

printf '0.23319412500000003 ' >> design.lcon

/usr/share/fsl/5.0/bin/fslmerge -t varcope2  /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-1.feat/reg_standard/stats/varcope2 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-2.feat/reg_standard/stats/varcope2 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-3.feat/reg_standard/stats/varcope2 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-4.feat/reg_standard/stats/varcope2

/usr/share/fsl/5.0/bin/fslmaths varcope2 -mas mask varcope2

/usr/share/fsl/5.0/bin/fslmerge -t cope3  /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-1.feat/reg_standard/stats/cope3 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-2.feat/reg_standard/stats/cope3 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-3.feat/reg_standard/stats/cope3 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-4.feat/reg_standard/stats/cope3

/usr/share/fsl/5.0/bin/fslmaths cope3 -mas mask cope3

printf '0.29647314999999996 ' >> design.lcon

/usr/share/fsl/5.0/bin/fslmerge -t varcope3  /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-1.feat/reg_standard/stats/varcope3 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-2.feat/reg_standard/stats/varcope3 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-3.feat/reg_standard/stats/varcope3 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-4.feat/reg_standard/stats/varcope3

/usr/share/fsl/5.0/bin/fslmaths varcope3 -mas mask varcope3

/usr/share/fsl/5.0/bin/fslmerge -t cope4  /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-1.feat/reg_standard/stats/cope4 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-2.feat/reg_standard/stats/cope4 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-3.feat/reg_standard/stats/cope4 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-4.feat/reg_standard/stats/cope4

/usr/share/fsl/5.0/bin/fslmaths cope4 -mas mask cope4

printf '0.234548875 ' >> design.lcon

/usr/share/fsl/5.0/bin/fslmerge -t varcope4  /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-1.feat/reg_standard/stats/varcope4 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-2.feat/reg_standard/stats/varcope4 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-3.feat/reg_standard/stats/varcope4 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-4.feat/reg_standard/stats/varcope4

/usr/share/fsl/5.0/bin/fslmaths varcope4 -mas mask varcope4

/usr/share/fsl/5.0/bin/fslmerge -t cope5  /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-1.feat/reg_standard/stats/cope5 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-2.feat/reg_standard/stats/cope5 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-3.feat/reg_standard/stats/cope5 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-4.feat/reg_standard/stats/cope5

/usr/share/fsl/5.0/bin/fslmaths cope5 -mas mask cope5

printf '0.23262017500000004 ' >> design.lcon

/usr/share/fsl/5.0/bin/fslmerge -t varcope5  /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-1.feat/reg_standard/stats/varcope5 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-2.feat/reg_standard/stats/varcope5 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-3.feat/reg_standard/stats/varcope5 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-4.feat/reg_standard/stats/varcope5

/usr/share/fsl/5.0/bin/fslmaths varcope5 -mas mask varcope5

/usr/share/fsl/5.0/bin/fslmerge -t cope6  /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-1.feat/reg_standard/stats/cope6 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-2.feat/reg_standard/stats/cope6 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-3.feat/reg_standard/stats/cope6 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-4.feat/reg_standard/stats/cope6

/usr/share/fsl/5.0/bin/fslmaths cope6 -mas mask cope6

printf '0.23262017500000004 ' >> design.lcon

/usr/share/fsl/5.0/bin/fslmerge -t varcope6  /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-1.feat/reg_standard/stats/varcope6 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-2.feat/reg_standard/stats/varcope6 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-3.feat/reg_standard/stats/varcope6 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-4.feat/reg_standard/stats/varcope6

/usr/share/fsl/5.0/bin/fslmaths varcope6 -mas mask varcope6

/usr/share/fsl/5.0/bin/fslmerge -t cope7  /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-1.feat/reg_standard/stats/cope7 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-2.feat/reg_standard/stats/cope7 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-3.feat/reg_standard/stats/cope7 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-4.feat/reg_standard/stats/cope7

/usr/share/fsl/5.0/bin/fslmaths cope7 -mas mask cope7

printf '0.578846825 ' >> design.lcon

/usr/share/fsl/5.0/bin/fslmerge -t varcope7  /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-1.feat/reg_standard/stats/varcope7 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-2.feat/reg_standard/stats/varcope7 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-3.feat/reg_standard/stats/varcope7 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-4.feat/reg_standard/stats/varcope7

/usr/share/fsl/5.0/bin/fslmaths varcope7 -mas mask varcope7

/usr/share/fsl/5.0/bin/fslmerge -t cope8  /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-1.feat/reg_standard/stats/cope8 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-2.feat/reg_standard/stats/cope8 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-3.feat/reg_standard/stats/cope8 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-4.feat/reg_standard/stats/cope8

/usr/share/fsl/5.0/bin/fslmaths cope8 -mas mask cope8

printf '0.58811165 ' >> design.lcon

/usr/share/fsl/5.0/bin/fslmerge -t varcope8  /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-1.feat/reg_standard/stats/varcope8 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-2.feat/reg_standard/stats/varcope8 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-3.feat/reg_standard/stats/varcope8 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-4.feat/reg_standard/stats/varcope8

/usr/share/fsl/5.0/bin/fslmaths varcope8 -mas mask varcope8

/usr/share/fsl/5.0/bin/fslmerge -t cope9  /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-1.feat/reg_standard/stats/cope9 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-2.feat/reg_standard/stats/cope9 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-3.feat/reg_standard/stats/cope9 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-4.feat/reg_standard/stats/cope9

/usr/share/fsl/5.0/bin/fslmaths cope9 -mas mask cope9

printf '0.5827821000000001 ' >> design.lcon

/usr/share/fsl/5.0/bin/fslmerge -t varcope9  /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-1.feat/reg_standard/stats/varcope9 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-2.feat/reg_standard/stats/varcope9 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-3.feat/reg_standard/stats/varcope9 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-4.feat/reg_standard/stats/varcope9

/usr/share/fsl/5.0/bin/fslmaths varcope9 -mas mask varcope9

/usr/share/fsl/5.0/bin/fslmerge -t cope10  /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-1.feat/reg_standard/stats/cope10 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-2.feat/reg_standard/stats/cope10 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-3.feat/reg_standard/stats/cope10 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-4.feat/reg_standard/stats/cope10

/usr/share/fsl/5.0/bin/fslmaths cope10 -mas mask cope10

printf '1.154867 ' >> design.lcon

/usr/share/fsl/5.0/bin/fslmerge -t varcope10  /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-1.feat/reg_standard/stats/varcope10 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-2.feat/reg_standard/stats/varcope10 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-3.feat/reg_standard/stats/varcope10 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-4.feat/reg_standard/stats/varcope10

/usr/share/fsl/5.0/bin/fslmaths varcope10 -mas mask varcope10

/usr/share/fsl/5.0/bin/fslmerge -t cope11  /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-1.feat/reg_standard/stats/cope11 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-2.feat/reg_standard/stats/cope11 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-3.feat/reg_standard/stats/cope11 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-4.feat/reg_standard/stats/cope11

/usr/share/fsl/5.0/bin/fslmaths cope11 -mas mask cope11

printf '1.1394647500000001 ' >> design.lcon

/usr/share/fsl/5.0/bin/fslmerge -t varcope11  /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-1.feat/reg_standard/stats/varcope11 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-2.feat/reg_standard/stats/varcope11 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-3.feat/reg_standard/stats/varcope11 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-4.feat/reg_standard/stats/varcope11

/usr/share/fsl/5.0/bin/fslmaths varcope11 -mas mask varcope11

/usr/share/fsl/5.0/bin/fslmerge -t cope12  /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-1.feat/reg_standard/stats/cope12 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-2.feat/reg_standard/stats/cope12 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-3.feat/reg_standard/stats/cope12 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-4.feat/reg_standard/stats/cope12

/usr/share/fsl/5.0/bin/fslmaths cope12 -mas mask cope12

printf '0.5690351499999999 ' >> design.lcon

/usr/share/fsl/5.0/bin/fslmerge -t varcope12  /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-1.feat/reg_standard/stats/varcope12 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-2.feat/reg_standard/stats/varcope12 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-3.feat/reg_standard/stats/varcope12 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-4.feat/reg_standard/stats/varcope12

/usr/share/fsl/5.0/bin/fslmaths varcope12 -mas mask varcope12

/usr/share/fsl/5.0/bin/fslmerge -t cope13  /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-1.feat/reg_standard/stats/cope13 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-2.feat/reg_standard/stats/cope13 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-3.feat/reg_standard/stats/cope13 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-4.feat/reg_standard/stats/cope13

/usr/share/fsl/5.0/bin/fslmaths cope13 -mas mask cope13

printf '1.154524 ' >> design.lcon

/usr/share/fsl/5.0/bin/fslmerge -t varcope13  /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-1.feat/reg_standard/stats/varcope13 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-2.feat/reg_standard/stats/varcope13 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-3.feat/reg_standard/stats/varcope13 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-4.feat/reg_standard/stats/varcope13

/usr/share/fsl/5.0/bin/fslmaths varcope13 -mas mask varcope13

/usr/share/fsl/5.0/bin/fslmerge -t cope14  /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-1.feat/reg_standard/stats/cope14 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-2.feat/reg_standard/stats/cope14 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-3.feat/reg_standard/stats/cope14 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-4.feat/reg_standard/stats/cope14

/usr/share/fsl/5.0/bin/fslmaths cope14 -mas mask cope14

printf '1.13742325 ' >> design.lcon

/usr/share/fsl/5.0/bin/fslmerge -t varcope14  /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-1.feat/reg_standard/stats/varcope14 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-2.feat/reg_standard/stats/varcope14 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-3.feat/reg_standard/stats/varcope14 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-4.feat/reg_standard/stats/varcope14

/usr/share/fsl/5.0/bin/fslmaths varcope14 -mas mask varcope14

/usr/share/fsl/5.0/bin/fslmerge -t cope15  /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-1.feat/reg_standard/stats/cope15 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-2.feat/reg_standard/stats/cope15 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-3.feat/reg_standard/stats/cope15 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-4.feat/reg_standard/stats/cope15

/usr/share/fsl/5.0/bin/fslmaths cope15 -mas mask cope15

printf '1.1369257499999998 ' >> design.lcon

/usr/share/fsl/5.0/bin/fslmerge -t varcope15  /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-1.feat/reg_standard/stats/varcope15 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-2.feat/reg_standard/stats/varcope15 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-3.feat/reg_standard/stats/varcope15 /home/data/psyinf/forrest_gump/collection/visloc/sub-14/run-4.feat/reg_standard/stats/varcope15

/usr/share/fsl/5.0/bin/fslmaths varcope15 -mas mask varcope15