MRIQC: individual bold report

Summary

  • BIDS filename: sub-0051319_task-rest_run-1_bold.
  • Date and time: 2020-03-02, 18:42.
  • MRIQC version: 0.15.2rc1.
  • Workflow details:
    • Framewise Displacement was computed using AFNI 3dvolreg
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
Standard deviation map
FMRI summary plot

Other

aor0.0018040833333333338
aqi0.004704239666666667
dummy_trs0
dvarsnstd19.243037520504203
dvarsstd0.9971019262184876
dvarsvstd0.9753330540336138
efc0.5926886617984213
fber906.3648071289062
fdmean0.04524215703660056
fdnum0
fdperc0.0
fwhmavg2.370290491556244
fwhmx2.3837800000000002
fwhmy2.8593233333333337
fwhmz1.8677681413353977
gcor0.0278729
gsrx-0.0009214173769578338
gsry0.05756714567542076
sizet120
sizex64
sizey64
sizez28
snr3.6997116273623694
spacingtr3.0
spacingx3.0
spacingy3.0
spacingz4.400000095367432
summarybgk47.41702221658628
summarybgmad7.882500648498535
summarybgmean55.0084114074707
summarybgmedian27.59166717529297
summarybgn51370.0
summarybgp0521.525001525878906
summarybgp95180.04876174926733
summarybgstdv82.67742919921875
summaryfgk1.497497295963278
summaryfgmad182.8295440673828
summaryfgmean893.0930786132812
summaryfgmedian884.49169921875
summaryfgn33975.0
summaryfgp05478.27335815429683
summaryfgp951292.2383666992187
summaryfgstdv239.06692504882812
tsnr60.16823196411133
AcquisitionDuration6:06
AcquisitionMatrix64x64
EchoTime0.03
FieldofViewDimensions192x192
FieldofViewShapeRectangular
FlipAngle80
InstructionsSome participants were instructed to lay still and keep their eyes closed while no visual stimulus was presented during the resting state scan, others were instructed to keep their eyes open and look at a picture of a night sky with stars. Information about the eye status for each subject is provided in the dataset shared
MagneicFieldStrength3
ManufacturerSiemens
ManufacturersModelNameVerio
NumberOfSlices28.0
NumberofMeasurements120.0
ParallelAcquisitionNo
PhaseEncodingDirectionj-
PixelBandwidth2232.0
PixelSpacing3x3
PlaneOrientationSequentialuenceAxial
PulseSequenceTypeEPI
ReceiveCoilTypeHead
RepetitionTime3.0
ScanOptionsFS
SliceAcquisitionOrderInterleaved Ascending
SliceEncodingDirectionk
SliceThickness4.0
SliceTiming[1500.0, 0.0, 1607.14, 107.14, 1714.29, 214.29, 1821.43, 321.43, 1928.57, 428.57, 2035.71, 535.71, 2142.86, 642.86, 2250.0, 750.0, 2357.14, 857.14, 2464.29, 964.29, 2571.43, 1071.43, 2678.57, 1178.57, 2785.71, 1285.71, 2892.86, 1392.86]
SpacingBetweenSlices4.4
TaskDescriptionSome participants were instructed to lay still and keep their eyes closed while no visual stimulus was presented during the resting state scan, others were instructed to keep their eyes open and look at a picture of a night sky with stars. Information about the eye status for each subject is provided in the dataset shared (see link to dataset and/or to databases). Most children with ASD were scanned using a 200 time points EPI sequence (instead of 120) to allow for post-hoc deletion of high motion frames.
TaskNamerest
md5sum9b3d343d8836a5a47c6bf5e48544b4df
softwaremriqc
version0.15.2rc1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.