# Title Segmentation Statistics # # generating_program mri_segstats # cvs_version $Id: mri_segstats.c,v 1.121 2016/05/31 17:27:11 greve Exp $ # cmdline mri_segstats --seg mri/wmparc.mgz --sum stats/wmparc.stats --pv mri/norm.mgz --excludeid 0 --brainmask mri/brainmask.mgz --in mri/norm.mgz --in-intensity-name norm --in-intensity-units MR --subject 0051278 --surf-wm-vol --ctab /pasteur/homes/ntraut/bin/freesurfer-6.0.0/WMParcStatsLUT.txt --etiv # sysname Linux # hostname tars-935 # machine x86_64 # user ntraut # anatomy_type volume # # SUBJECTS_DIR /pasteur/projets/policy01/cinq/rto/data/abide/fs-6.0.0 # subjectname 0051278 # Measure VentricleChoroidVol, VentricleChoroidVol, Volume of ventricles and choroid plexus, 8248.000000, mm^3 # Measure lhCerebralWhiteMatter, lhCerebralWhiteMatterVol, Left hemisphere cerebral white matter volume, 203568.657823, mm^3 # Measure rhCerebralWhiteMatter, rhCerebralWhiteMatterVol, Right hemisphere cerebral white matter volume, 205524.959646, mm^3 # Measure CerebralWhiteMatter, CerebralWhiteMatterVol, Total cerebral white matter volume, 409093.617469, mm^3 # Measure Mask, MaskVol, Mask Volume, 1604409.000000, mm^3 # Measure EstimatedTotalIntraCranialVol, eTIV, Estimated Total Intracranial Volume, 1469302.698703, mm^3 # SegVolFile mri/wmparc.mgz # SegVolFileTimeStamp 2017/10/08 06:01:31 # ColorTable /pasteur/homes/ntraut/bin/freesurfer-6.0.0/WMParcStatsLUT.txt # ColorTableTimeStamp 2017/01/18 23:00:02 # InVolFile mri/norm.mgz # InVolFileTimeStamp 2017/10/07 22:22:38 # InVolFrame 0 # PVVolFile mri/norm.mgz # PVVolFileTimeStamp 2017/10/07 22:22:38 # ExcludeSegId 0 # Only reporting non-empty segmentations # VoxelVolume_mm3 1 # TableCol 1 ColHeader Index # TableCol 1 FieldName Index # TableCol 1 Units NA # TableCol 2 ColHeader SegId # TableCol 2 FieldName Segmentation Id # TableCol 2 Units NA # TableCol 3 ColHeader NVoxels # TableCol 3 FieldName Number of Voxels # TableCol 3 Units unitless # TableCol 4 ColHeader Volume_mm3 # TableCol 4 FieldName Volume # TableCol 4 Units mm^3 # TableCol 5 ColHeader StructName # TableCol 5 FieldName Structure Name # TableCol 5 Units NA # TableCol 6 ColHeader normMean # TableCol 6 FieldName Intensity normMean # TableCol 6 Units MR # TableCol 7 ColHeader normStdDev # TableCol 7 FieldName Itensity normStdDev # TableCol 7 Units MR # TableCol 8 ColHeader normMin # TableCol 8 FieldName Intensity normMin # TableCol 8 Units MR # TableCol 9 ColHeader normMax # TableCol 9 FieldName Intensity normMax # TableCol 9 Units MR # TableCol 10 ColHeader normRange # TableCol 10 FieldName Intensity normRange # TableCol 10 Units MR # NRows 70 # NTableCols 10 # ColHeaders Index SegId NVoxels Volume_mm3 StructName normMean normStdDev normMin normMax normRange 1 3001 2198 2225.2 wm-lh-bankssts 97.2270 10.1929 65.0000 126.0000 61.0000 2 3002 2463 2434.1 wm-lh-caudalanteriorcingulate 102.7328 10.5991 65.0000 138.0000 73.0000 3 3003 5786 5807.8 wm-lh-caudalmiddlefrontal 97.5434 11.5269 57.0000 128.0000 71.0000 4 3005 1964 1984.6 wm-lh-cuneus 91.1945 12.3666 62.0000 121.0000 59.0000 5 3006 559 608.6 wm-lh-entorhinal 72.4293 8.8584 45.0000 105.0000 60.0000 6 3007 6278 6138.7 wm-lh-fusiform 86.7276 12.2228 47.0000 118.0000 71.0000 7 3008 8161 8354.7 wm-lh-inferiorparietal 100.0365 12.1267 62.0000 133.0000 71.0000 8 3009 5041 5144.8 wm-lh-inferiortemporal 84.5755 12.3261 50.0000 119.0000 69.0000 9 3010 3811 3808.7 wm-lh-isthmuscingulate 100.4201 11.9975 27.0000 132.0000 105.0000 10 3011 8891 9211.5 wm-lh-lateraloccipital 95.0678 12.1347 55.0000 133.0000 78.0000 11 3012 6749 6671.3 wm-lh-lateralorbitofrontal 95.4592 12.9698 52.0000 127.0000 75.0000 12 3013 4834 4840.5 wm-lh-lingual 90.0066 12.0161 37.0000 125.0000 88.0000 13 3014 3457 3521.4 wm-lh-medialorbitofrontal 94.9743 13.5853 51.0000 127.0000 76.0000 14 3015 5134 5362.6 wm-lh-middletemporal 88.2766 11.2494 54.0000 122.0000 68.0000 15 3016 1422 1508.7 wm-lh-parahippocampal 82.5014 9.9722 48.0000 112.0000 64.0000 16 3017 4150 4153.9 wm-lh-paracentral 97.4542 10.8099 61.0000 123.0000 62.0000 17 3018 2942 2980.0 wm-lh-parsopercularis 99.1156 12.4325 61.0000 131.0000 70.0000 18 3019 912 979.2 wm-lh-parsorbitalis 90.1853 11.0366 63.0000 132.0000 69.0000 19 3020 2914 3005.9 wm-lh-parstriangularis 100.6489 10.7761 67.0000 128.0000 61.0000 20 3021 2662 2494.6 wm-lh-pericalcarine 90.8099 11.5650 27.0000 119.0000 92.0000 21 3022 5927 6094.5 wm-lh-postcentral 90.7299 12.6946 54.0000 125.0000 71.0000 22 3023 4577 4484.1 wm-lh-posteriorcingulate 99.3976 11.1707 44.0000 129.0000 85.0000 23 3024 12257 12433.4 wm-lh-precentral 97.0837 12.0983 61.0000 130.0000 69.0000 24 3025 7997 8103.7 wm-lh-precuneus 98.6946 11.9831 37.0000 132.0000 95.0000 25 3026 2483 2407.2 wm-lh-rostralanteriorcingulate 99.7874 15.4483 15.0000 136.0000 121.0000 26 3027 8721 8876.4 wm-lh-rostralmiddlefrontal 95.6490 12.5835 58.0000 128.0000 70.0000 27 3028 15687 15887.5 wm-lh-superiorfrontal 91.9236 11.9428 50.0000 125.0000 75.0000 28 3029 11069 11409.2 wm-lh-superiorparietal 99.0423 11.6323 61.0000 136.0000 75.0000 29 3030 7008 7261.3 wm-lh-superiortemporal 92.1425 11.3227 51.0000 124.0000 73.0000 30 3031 8915 9148.2 wm-lh-supramarginal 99.0728 11.9542 60.0000 131.0000 71.0000 31 3032 231 232.5 wm-lh-frontalpole 84.3074 9.4935 63.0000 107.0000 44.0000 32 3033 615 654.2 wm-lh-temporalpole 70.3789 8.8364 48.0000 99.0000 51.0000 33 3034 533 542.4 wm-lh-transversetemporal 91.4540 8.0686 67.0000 113.0000 46.0000 34 3035 8610 8540.3 wm-lh-insula 92.7459 13.2144 33.0000 123.0000 90.0000 35 4001 1718 1715.5 wm-rh-bankssts 102.5198 9.4079 70.0000 130.0000 60.0000 36 4002 2338 2339.2 wm-rh-caudalanteriorcingulate 102.1386 10.8972 69.0000 134.0000 65.0000 37 4003 5387 5406.6 wm-rh-caudalmiddlefrontal 95.3343 11.5178 51.0000 121.0000 70.0000 38 4005 2479 2576.3 wm-rh-cuneus 88.7636 10.1854 64.0000 117.0000 53.0000 39 4006 760 829.2 wm-rh-entorhinal 74.4395 9.5509 50.0000 109.0000 59.0000 40 4007 6354 6244.2 wm-rh-fusiform 88.8100 12.4013 45.0000 117.0000 72.0000 41 4008 10639 10841.2 wm-rh-inferiorparietal 100.2404 11.8565 60.0000 131.0000 71.0000 42 4009 5391 5464.7 wm-rh-inferiortemporal 88.2324 13.6074 49.0000 124.0000 75.0000 43 4010 3411 3385.5 wm-rh-isthmuscingulate 98.4890 11.4976 36.0000 129.0000 93.0000 44 4011 9707 9915.1 wm-rh-lateraloccipital 90.4191 11.4508 53.0000 127.0000 74.0000 45 4012 6082 6009.2 wm-rh-lateralorbitofrontal 91.1133 12.4881 49.0000 119.0000 70.0000 46 4013 5529 5661.0 wm-rh-lingual 87.6540 11.3187 53.0000 119.0000 66.0000 47 4014 3599 3632.0 wm-rh-medialorbitofrontal 94.1981 12.2775 50.0000 125.0000 75.0000 48 4015 5213 5386.9 wm-rh-middletemporal 90.7882 14.5363 51.0000 129.0000 78.0000 49 4016 1519 1597.2 wm-rh-parahippocampal 83.3002 9.7404 49.0000 111.0000 62.0000 50 4017 4737 4691.8 wm-rh-paracentral 97.1910 10.7584 62.0000 123.0000 61.0000 51 4018 3151 3117.1 wm-rh-parsopercularis 93.6563 12.9078 60.0000 120.0000 60.0000 52 4019 1311 1319.9 wm-rh-parsorbitalis 84.1998 11.4253 55.0000 120.0000 65.0000 53 4020 3988 4003.3 wm-rh-parstriangularis 92.0028 12.0960 51.0000 121.0000 70.0000 54 4021 2955 2888.4 wm-rh-pericalcarine 89.3882 10.1268 52.0000 127.0000 75.0000 55 4022 6132 6251.8 wm-rh-postcentral 94.7898 13.3085 58.0000 130.0000 72.0000 56 4023 4034 3971.3 wm-rh-posteriorcingulate 99.1049 10.8618 51.0000 136.0000 85.0000 57 4024 12641 12647.7 wm-rh-precentral 97.3031 12.1581 57.0000 128.0000 71.0000 58 4025 7658 7609.4 wm-rh-precuneus 93.5358 11.2252 60.0000 121.0000 61.0000 59 4026 1909 1874.3 wm-rh-rostralanteriorcingulate 99.0770 14.2323 60.0000 135.0000 75.0000 60 4027 9172 9367.8 wm-rh-rostralmiddlefrontal 94.6282 11.6653 57.0000 124.0000 67.0000 61 4028 14457 14601.4 wm-rh-superiorfrontal 92.4841 12.2475 51.0000 124.0000 73.0000 62 4029 10780 11045.6 wm-rh-superiorparietal 95.8930 12.3118 58.0000 134.0000 76.0000 63 4030 5376 5569.0 wm-rh-superiortemporal 92.3495 14.3782 50.0000 127.0000 77.0000 64 4031 8174 8216.6 wm-rh-supramarginal 104.6051 11.6229 66.0000 140.0000 74.0000 65 4032 275 290.3 wm-rh-frontalpole 89.2145 10.6223 69.0000 112.0000 43.0000 66 4033 696 701.5 wm-rh-temporalpole 69.6753 8.0157 50.0000 92.0000 42.0000 67 4034 502 486.6 wm-rh-transversetemporal 98.4004 10.0469 67.0000 129.0000 62.0000 68 4035 9223 9134.6 wm-rh-insula 89.9256 14.2354 28.0000 125.0000 97.0000 69 5001 27152 26956.1 Left-UnsegmentedWhiteMatter 99.3715 12.1413 19.0000 138.0000 119.0000 70 5002 25899 25826.7 Right-UnsegmentedWhiteMatter 100.5155 9.9893 15.0000 130.0000 115.0000