# Title Segmentation Statistics # # generating_program mri_segstats # cvs_version $Id: mri_segstats.c,v 1.121 2016/05/31 17:27:11 greve Exp $ # cmdline mri_segstats --seg mri/wmparc.mgz --sum stats/wmparc.stats --pv mri/norm.mgz --excludeid 0 --brainmask mri/brainmask.mgz --in mri/norm.mgz --in-intensity-name norm --in-intensity-units MR --subject 0050612 --surf-wm-vol --ctab /pasteur/homes/ntraut/bin/freesurfer-6.0.0/WMParcStatsLUT.txt --etiv # sysname Linux # hostname tars-599 # machine x86_64 # user ntraut # anatomy_type volume # # SUBJECTS_DIR /pasteur/projets/policy01/cinq/rto/data/abide/fs-6.0.0 # subjectname 0050612 # Measure VentricleChoroidVol, VentricleChoroidVol, Volume of ventricles and choroid plexus, 14327.000000, mm^3 # Measure lhCerebralWhiteMatter, lhCerebralWhiteMatterVol, Left hemisphere cerebral white matter volume, 226475.665762, mm^3 # Measure rhCerebralWhiteMatter, rhCerebralWhiteMatterVol, Right hemisphere cerebral white matter volume, 233634.444061, mm^3 # Measure CerebralWhiteMatter, CerebralWhiteMatterVol, Total cerebral white matter volume, 460110.109823, mm^3 # Measure Mask, MaskVol, Mask Volume, 1775832.000000, mm^3 # Measure EstimatedTotalIntraCranialVol, eTIV, Estimated Total Intracranial Volume, 1510207.463666, mm^3 # SegVolFile mri/wmparc.mgz # SegVolFileTimeStamp 2017/10/08 10:03:29 # ColorTable /pasteur/homes/ntraut/bin/freesurfer-6.0.0/WMParcStatsLUT.txt # ColorTableTimeStamp 2017/01/18 23:00:02 # InVolFile mri/norm.mgz # InVolFileTimeStamp 2017/10/08 02:13:06 # InVolFrame 0 # PVVolFile mri/norm.mgz # PVVolFileTimeStamp 2017/10/08 02:13:06 # ExcludeSegId 0 # Only reporting non-empty segmentations # VoxelVolume_mm3 1 # TableCol 1 ColHeader Index # TableCol 1 FieldName Index # TableCol 1 Units NA # TableCol 2 ColHeader SegId # TableCol 2 FieldName Segmentation Id # TableCol 2 Units NA # TableCol 3 ColHeader NVoxels # TableCol 3 FieldName Number of Voxels # TableCol 3 Units unitless # TableCol 4 ColHeader Volume_mm3 # TableCol 4 FieldName Volume # TableCol 4 Units mm^3 # TableCol 5 ColHeader StructName # TableCol 5 FieldName Structure Name # TableCol 5 Units NA # TableCol 6 ColHeader normMean # TableCol 6 FieldName Intensity normMean # TableCol 6 Units MR # TableCol 7 ColHeader normStdDev # TableCol 7 FieldName Itensity normStdDev # TableCol 7 Units MR # TableCol 8 ColHeader normMin # TableCol 8 FieldName Intensity normMin # TableCol 8 Units MR # TableCol 9 ColHeader normMax # TableCol 9 FieldName Intensity normMax # TableCol 9 Units MR # TableCol 10 ColHeader normRange # TableCol 10 FieldName Intensity normRange # TableCol 10 Units MR # NRows 70 # NTableCols 10 # ColHeaders Index SegId NVoxels Volume_mm3 StructName normMean normStdDev normMin normMax normRange 1 3001 3077 3067.0 wm-lh-bankssts 100.3692 10.3770 71.0000 123.0000 52.0000 2 3002 2275 2257.4 wm-lh-caudalanteriorcingulate 104.9688 9.5856 66.0000 127.0000 61.0000 3 3003 6112 6004.2 wm-lh-caudalmiddlefrontal 100.1464 10.9150 68.0000 120.0000 52.0000 4 3005 3025 2955.4 wm-lh-cuneus 89.8572 10.0234 66.0000 114.0000 48.0000 5 3006 850 879.4 wm-lh-entorhinal 78.8682 8.8374 56.0000 103.0000 47.0000 6 3007 6652 6631.8 wm-lh-fusiform 89.8611 11.3956 56.0000 115.0000 59.0000 7 3008 8310 8443.1 wm-lh-inferiorparietal 95.3020 11.7429 67.0000 121.0000 54.0000 8 3009 6013 6023.9 wm-lh-inferiortemporal 87.1758 13.3303 59.0000 117.0000 58.0000 9 3010 3744 3680.1 wm-lh-isthmuscingulate 104.5823 11.0327 47.0000 126.0000 79.0000 10 3011 10581 10837.3 wm-lh-lateraloccipital 88.6922 11.1979 60.0000 119.0000 59.0000 11 3012 6291 6174.0 wm-lh-lateralorbitofrontal 95.5069 11.3545 64.0000 120.0000 56.0000 12 3013 6009 5977.4 wm-lh-lingual 87.4039 11.8860 21.0000 115.0000 94.0000 13 3014 4045 3967.4 wm-lh-medialorbitofrontal 94.3019 12.2474 36.0000 122.0000 86.0000 14 3015 3590 3726.7 wm-lh-middletemporal 87.0039 11.3027 62.0000 119.0000 57.0000 15 3016 1406 1517.8 wm-lh-parahippocampal 92.0114 8.1574 69.0000 113.0000 44.0000 16 3017 5007 4911.0 wm-lh-paracentral 93.8678 10.8861 65.0000 117.0000 52.0000 17 3018 2749 2743.8 wm-lh-parsopercularis 95.0255 12.7875 66.0000 120.0000 54.0000 18 3019 748 789.9 wm-lh-parsorbitalis 86.8904 11.1265 66.0000 115.0000 49.0000 19 3020 2146 2196.6 wm-lh-parstriangularis 95.9870 11.8066 65.0000 117.0000 52.0000 20 3021 4564 4410.1 wm-lh-pericalcarine 90.6242 13.1947 8.0000 116.0000 108.0000 21 3022 6939 6975.2 wm-lh-postcentral 88.0419 10.9077 60.0000 119.0000 59.0000 22 3023 4699 4595.8 wm-lh-posteriorcingulate 102.1637 12.3247 43.0000 124.0000 81.0000 23 3024 13882 13652.7 wm-lh-precentral 94.5278 11.5887 63.0000 120.0000 57.0000 24 3025 8725 8670.9 wm-lh-precuneus 97.3971 11.6885 38.0000 127.0000 89.0000 25 3026 2248 2130.8 wm-lh-rostralanteriorcingulate 100.3634 16.4297 39.0000 128.0000 89.0000 26 3027 12214 12280.2 wm-lh-rostralmiddlefrontal 97.1013 10.5549 68.0000 121.0000 53.0000 27 3028 21090 20896.4 wm-lh-superiorfrontal 93.2018 10.7838 65.0000 116.0000 51.0000 28 3029 12836 12787.9 wm-lh-superiorparietal 94.4402 11.9692 66.0000 120.0000 54.0000 29 3030 7078 7117.0 wm-lh-superiortemporal 93.4874 13.4845 60.0000 123.0000 63.0000 30 3031 7712 7610.9 wm-lh-supramarginal 93.4527 12.9446 62.0000 121.0000 59.0000 31 3032 311 296.7 wm-lh-frontalpole 86.8617 9.9348 68.0000 108.0000 40.0000 32 3033 900 941.7 wm-lh-temporalpole 75.8633 8.2932 60.0000 100.0000 40.0000 33 3034 707 684.7 wm-lh-transversetemporal 95.1372 11.8505 70.0000 121.0000 51.0000 34 3035 8536 8359.1 wm-lh-insula 95.0114 13.4719 62.0000 123.0000 61.0000 35 4001 2685 2691.9 wm-rh-bankssts 100.4078 8.4516 71.0000 118.0000 47.0000 36 4002 2655 2661.0 wm-rh-caudalanteriorcingulate 103.1654 10.3187 71.0000 124.0000 53.0000 37 4003 6247 6123.8 wm-rh-caudalmiddlefrontal 96.4428 10.7121 67.0000 117.0000 50.0000 38 4005 3263 3280.7 wm-rh-cuneus 89.1238 8.6754 66.0000 114.0000 48.0000 39 4006 833 877.8 wm-rh-entorhinal 77.2701 8.6721 58.0000 105.0000 47.0000 40 4007 6594 6551.8 wm-rh-fusiform 85.1644 10.8774 7.0000 116.0000 109.0000 41 4008 10472 10499.5 wm-rh-inferiorparietal 92.5029 10.2877 65.0000 116.0000 51.0000 42 4009 6951 7045.1 wm-rh-inferiortemporal 87.2615 12.1027 58.0000 113.0000 55.0000 43 4010 3324 3321.9 wm-rh-isthmuscingulate 101.4576 10.2920 45.0000 121.0000 76.0000 44 4011 10267 10462.0 wm-rh-lateraloccipital 89.3222 10.0024 60.0000 113.0000 53.0000 45 4012 6602 6507.5 wm-rh-lateralorbitofrontal 93.2045 11.3664 60.0000 116.0000 56.0000 46 4013 6026 6032.5 wm-rh-lingual 84.3195 12.2462 8.0000 112.0000 104.0000 47 4014 4228 4085.8 wm-rh-medialorbitofrontal 90.7462 13.9359 29.0000 116.0000 87.0000 48 4015 5996 6199.1 wm-rh-middletemporal 89.4199 11.5693 62.0000 116.0000 54.0000 49 4016 1454 1517.4 wm-rh-parahippocampal 89.3982 9.1170 33.0000 114.0000 81.0000 50 4017 5103 4964.6 wm-rh-paracentral 91.7127 9.6116 62.0000 111.0000 49.0000 51 4018 2821 2838.1 wm-rh-parsopercularis 97.9546 11.2696 67.0000 118.0000 51.0000 52 4019 957 998.0 wm-rh-parsorbitalis 86.6353 9.2553 69.0000 112.0000 43.0000 53 4020 2634 2701.0 wm-rh-parstriangularis 97.0607 9.5694 73.0000 114.0000 41.0000 54 4021 4545 4356.0 wm-rh-pericalcarine 85.2651 14.9094 5.0000 114.0000 109.0000 55 4022 8378 8497.8 wm-rh-postcentral 89.9692 10.4027 63.0000 116.0000 53.0000 56 4023 4088 4044.7 wm-rh-posteriorcingulate 100.8498 10.3650 41.0000 125.0000 84.0000 57 4024 14944 14839.5 wm-rh-precentral 93.3023 10.0350 64.0000 118.0000 54.0000 58 4025 10614 10449.7 wm-rh-precuneus 94.1954 10.5689 22.0000 117.0000 95.0000 59 4026 1786 1774.2 wm-rh-rostralanteriorcingulate 106.6036 11.2008 58.0000 133.0000 75.0000 60 4027 11760 11840.0 wm-rh-rostralmiddlefrontal 94.4757 10.2985 68.0000 117.0000 49.0000 61 4028 18271 18139.2 wm-rh-superiorfrontal 91.4906 10.6856 63.0000 114.0000 51.0000 62 4029 13344 13384.4 wm-rh-superiorparietal 90.5231 10.8978 64.0000 118.0000 54.0000 63 4030 6659 6893.9 wm-rh-superiortemporal 90.8163 11.9608 60.0000 118.0000 58.0000 64 4031 9261 9306.7 wm-rh-supramarginal 96.3426 12.0570 62.0000 117.0000 55.0000 65 4032 322 342.8 wm-rh-frontalpole 83.5528 8.4610 68.0000 109.0000 41.0000 66 4033 699 732.2 wm-rh-temporalpole 73.6695 6.9788 58.0000 95.0000 37.0000 67 4034 747 719.2 wm-rh-transversetemporal 96.4056 10.6930 71.0000 115.0000 44.0000 68 4035 9470 9324.5 wm-rh-insula 91.7257 12.5313 33.0000 118.0000 85.0000 69 5001 29478 29370.7 Left-UnsegmentedWhiteMatter 103.4908 11.5455 30.0000 126.0000 96.0000 70 5002 28481 28204.1 Right-UnsegmentedWhiteMatter 99.6061 11.0557 29.0000 126.0000 97.0000