# Title Segmentation Statistics # # generating_program mri_segstats # cvs_version $Id: mri_segstats.c,v 1.121 2016/05/31 17:27:11 greve Exp $ # cmdline mri_segstats --seg mri/wmparc.mgz --sum stats/wmparc.stats --pv mri/norm.mgz --excludeid 0 --brainmask mri/brainmask.mgz --in mri/norm.mgz --in-intensity-name norm --in-intensity-units MR --subject sub-10 --surf-wm-vol --ctab /opt/freesurfer/WMParcStatsLUT.txt --etiv # sysname Linux # hostname nid00784 # machine x86_64 # user oesteban # anatomy_type volume # # SUBJECTS_DIR /corral-repl/utexas/poldracklab/data/OpenNeuro/ds000114/derivatives/freesurfer-6.0.1 # subjectname sub-10 # Measure VentricleChoroidVol, VentricleChoroidVol, Volume of ventricles and choroid plexus, 18026.000000, mm^3 # Measure lhCerebralWhiteMatter, lhCerebralWhiteMatterVol, Left hemisphere cerebral white matter volume, 193066.957826, mm^3 # Measure rhCerebralWhiteMatter, rhCerebralWhiteMatterVol, Right hemisphere cerebral white matter volume, 190428.103228, mm^3 # Measure CerebralWhiteMatter, CerebralWhiteMatterVol, Total cerebral white matter volume, 383495.061054, mm^3 # Measure Mask, MaskVol, Mask Volume, 1180661.000000, mm^3 # Measure EstimatedTotalIntraCranialVol, eTIV, Estimated Total Intracranial Volume, 1177789.072125, mm^3 # SegVolFile mri/wmparc.mgz # SegVolFileTimeStamp 2019/10/16 20:36:50 # ColorTable /opt/freesurfer/WMParcStatsLUT.txt # ColorTableTimeStamp 2017/10/20 18:17:30 # InVolFile mri/norm.mgz # InVolFileTimeStamp 2019/10/16 17:26:08 # InVolFrame 0 # PVVolFile mri/norm.mgz # PVVolFileTimeStamp 2019/10/16 17:26:08 # ExcludeSegId 0 # Only reporting non-empty segmentations # VoxelVolume_mm3 1 # TableCol 1 ColHeader Index # TableCol 1 FieldName Index # TableCol 1 Units NA # TableCol 2 ColHeader SegId # TableCol 2 FieldName Segmentation Id # TableCol 2 Units NA # TableCol 3 ColHeader NVoxels # TableCol 3 FieldName Number of Voxels # TableCol 3 Units unitless # TableCol 4 ColHeader Volume_mm3 # TableCol 4 FieldName Volume # TableCol 4 Units mm^3 # TableCol 5 ColHeader StructName # TableCol 5 FieldName Structure Name # TableCol 5 Units NA # TableCol 6 ColHeader normMean # TableCol 6 FieldName Intensity normMean # TableCol 6 Units MR # TableCol 7 ColHeader normStdDev # TableCol 7 FieldName Itensity normStdDev # TableCol 7 Units MR # TableCol 8 ColHeader normMin # TableCol 8 FieldName Intensity normMin # TableCol 8 Units MR # TableCol 9 ColHeader normMax # TableCol 9 FieldName Intensity normMax # TableCol 9 Units MR # TableCol 10 ColHeader normRange # TableCol 10 FieldName Intensity normRange # TableCol 10 Units MR # NRows 70 # NTableCols 10 # ColHeaders Index SegId NVoxels Volume_mm3 StructName normMean normStdDev normMin normMax normRange 1 3001 3059 3028.9 wm-lh-bankssts 96.4106 9.5985 65.0000 122.0000 57.0000 2 3002 2053 2023.2 wm-lh-caudalanteriorcingulate 99.5572 9.1463 66.0000 115.0000 49.0000 3 3003 5165 5005.6 wm-lh-caudalmiddlefrontal 95.5648 10.4208 63.0000 114.0000 51.0000 4 3005 2080 2055.6 wm-lh-cuneus 90.9620 10.0859 66.0000 114.0000 48.0000 5 3006 880 925.1 wm-lh-entorhinal 79.0227 11.0687 54.0000 101.0000 47.0000 6 3007 5602 5578.6 wm-lh-fusiform 91.2817 11.8996 27.0000 116.0000 89.0000 7 3008 8833 8739.9 wm-lh-inferiorparietal 93.0317 9.9482 62.0000 117.0000 55.0000 8 3009 5384 5433.0 wm-lh-inferiortemporal 89.8707 11.6176 57.0000 117.0000 60.0000 9 3010 3029 3078.1 wm-lh-isthmuscingulate 98.4870 11.3179 33.0000 118.0000 85.0000 10 3011 9453 9381.0 wm-lh-lateraloccipital 90.5466 10.2069 57.0000 113.0000 56.0000 11 3012 5592 5508.7 wm-lh-lateralorbitofrontal 93.2078 12.7379 52.0000 117.0000 65.0000 12 3013 4524 4499.8 wm-lh-lingual 86.2878 10.8674 31.0000 111.0000 80.0000 13 3014 2841 2793.1 wm-lh-medialorbitofrontal 90.5625 13.1225 45.0000 113.0000 68.0000 14 3015 4580 4714.6 wm-lh-middletemporal 90.7987 11.1246 63.0000 120.0000 57.0000 15 3016 1259 1331.9 wm-lh-parahippocampal 84.7903 8.9997 62.0000 104.0000 42.0000 16 3017 3545 3475.4 wm-lh-paracentral 92.6889 9.1102 61.0000 110.0000 49.0000 17 3018 3034 2989.2 wm-lh-parsopercularis 92.3579 11.7196 64.0000 115.0000 51.0000 18 3019 761 765.9 wm-lh-parsorbitalis 87.1353 10.7588 65.0000 111.0000 46.0000 19 3020 2515 2476.5 wm-lh-parstriangularis 94.1471 10.8124 65.0000 114.0000 49.0000 20 3021 2939 2749.9 wm-lh-pericalcarine 91.1599 9.9179 57.0000 113.0000 56.0000 21 3022 6559 6566.2 wm-lh-postcentral 89.5397 10.0592 63.0000 116.0000 53.0000 22 3023 3643 3570.6 wm-lh-posteriorcingulate 98.0681 10.5909 37.0000 119.0000 82.0000 23 3024 11339 11231.5 wm-lh-precentral 92.9158 9.7880 63.0000 117.0000 54.0000 24 3025 7835 7703.9 wm-lh-precuneus 94.5940 10.3510 38.0000 112.0000 74.0000 25 3026 1891 1812.6 wm-lh-rostralanteriorcingulate 95.4976 14.9002 23.0000 117.0000 94.0000 26 3027 9432 9189.0 wm-lh-rostralmiddlefrontal 93.9984 11.3306 62.0000 115.0000 53.0000 27 3028 13716 13524.9 wm-lh-superiorfrontal 92.7870 10.6645 63.0000 114.0000 51.0000 28 3029 11650 11481.7 wm-lh-superiorparietal 92.8195 10.0815 62.0000 114.0000 52.0000 29 3030 6538 6680.7 wm-lh-superiortemporal 91.8246 10.0627 62.0000 112.0000 50.0000 30 3031 7259 7214.1 wm-lh-supramarginal 92.7990 11.5219 63.0000 117.0000 54.0000 31 3032 370 377.8 wm-lh-frontalpole 93.1000 10.4287 68.0000 113.0000 45.0000 32 3033 577 601.7 wm-lh-temporalpole 77.6568 9.7666 60.0000 101.0000 41.0000 33 3034 619 598.8 wm-lh-transversetemporal 89.5509 9.4145 70.0000 111.0000 41.0000 34 3035 8152 8123.3 wm-lh-insula 90.7093 13.4015 50.0000 116.0000 66.0000 35 4001 3055 3006.7 wm-rh-bankssts 97.1257 9.2502 67.0000 121.0000 54.0000 36 4002 2145 2097.2 wm-rh-caudalanteriorcingulate 96.0149 12.5622 63.0000 115.0000 52.0000 37 4003 4458 4363.3 wm-rh-caudalmiddlefrontal 96.6467 10.2849 64.0000 115.0000 51.0000 38 4005 2628 2537.8 wm-rh-cuneus 89.4014 10.4615 62.0000 109.0000 47.0000 39 4006 646 689.0 wm-rh-entorhinal 77.7771 10.2326 55.0000 99.0000 44.0000 40 4007 5819 5793.9 wm-rh-fusiform 92.6797 11.8000 41.0000 119.0000 78.0000 41 4008 9482 9523.1 wm-rh-inferiorparietal 92.9171 9.4796 64.0000 114.0000 50.0000 42 4009 5336 5324.1 wm-rh-inferiortemporal 88.7727 12.3839 58.0000 118.0000 60.0000 43 4010 2791 2819.0 wm-rh-isthmuscingulate 97.4676 9.6387 36.0000 114.0000 78.0000 44 4011 8301 8359.2 wm-rh-lateraloccipital 91.4230 9.6412 64.0000 114.0000 50.0000 45 4012 5784 5666.6 wm-rh-lateralorbitofrontal 91.0968 13.1685 43.0000 118.0000 75.0000 46 4013 4603 4589.0 wm-rh-lingual 86.9040 11.2255 26.0000 114.0000 88.0000 47 4014 2910 2875.1 wm-rh-medialorbitofrontal 90.9261 12.4337 50.0000 115.0000 65.0000 48 4015 5627 5687.5 wm-rh-middletemporal 92.5763 11.0627 60.0000 117.0000 57.0000 49 4016 1231 1273.6 wm-rh-parahippocampal 85.6328 9.6187 37.0000 111.0000 74.0000 50 4017 3390 3274.2 wm-rh-paracentral 92.6268 9.9388 62.0000 112.0000 50.0000 51 4018 2455 2418.1 wm-rh-parsopercularis 94.7185 11.2937 64.0000 113.0000 49.0000 52 4019 1014 1013.1 wm-rh-parsorbitalis 85.2722 10.2701 62.0000 107.0000 45.0000 53 4020 2623 2582.9 wm-rh-parstriangularis 93.8631 10.8279 66.0000 114.0000 48.0000 54 4021 2776 2554.9 wm-rh-pericalcarine 84.9294 12.9797 10.0000 108.0000 98.0000 55 4022 6869 6812.6 wm-rh-postcentral 90.3974 10.6549 61.0000 120.0000 59.0000 56 4023 3585 3500.8 wm-rh-posteriorcingulate 96.2393 11.3698 38.0000 122.0000 84.0000 57 4024 11929 11818.6 wm-rh-precentral 94.2472 9.7305 64.0000 116.0000 52.0000 58 4025 8190 8039.1 wm-rh-precuneus 94.6438 10.0249 62.0000 112.0000 50.0000 59 4026 1524 1463.9 wm-rh-rostralanteriorcingulate 96.1030 12.9556 51.0000 119.0000 68.0000 60 4027 9955 9686.3 wm-rh-rostralmiddlefrontal 93.4032 11.7598 58.0000 116.0000 58.0000 61 4028 12179 11981.6 wm-rh-superiorfrontal 92.3335 10.7994 62.0000 113.0000 51.0000 62 4029 10382 10313.0 wm-rh-superiorparietal 92.2651 10.0191 61.0000 112.0000 51.0000 63 4030 4905 5110.4 wm-rh-superiortemporal 90.9633 11.4157 60.0000 116.0000 56.0000 64 4031 7362 7313.5 wm-rh-supramarginal 95.3151 11.1962 62.0000 116.0000 54.0000 65 4032 369 381.1 wm-rh-frontalpole 92.2222 10.4442 68.0000 113.0000 45.0000 66 4033 680 687.5 wm-rh-temporalpole 74.5324 9.1595 55.0000 96.0000 41.0000 67 4034 441 419.5 wm-rh-transversetemporal 91.5714 7.9613 70.0000 110.0000 40.0000 68 4035 7977 7927.2 wm-rh-insula 89.8123 13.2289 55.0000 116.0000 61.0000 69 5001 24887 25110.6 Left-UnsegmentedWhiteMatter 98.0712 12.8619 16.0000 121.0000 105.0000 70 5002 25252 25445.9 Right-UnsegmentedWhiteMatter 98.2764 11.9582 12.0000 121.0000 109.0000