# Title Segmentation Statistics # # generating_program mri_segstats # cvs_version $Id: mri_segstats.c,v 1.121 2016/05/31 17:27:11 greve Exp $ # cmdline mri_segstats --seg mri/wmparc.mgz --sum stats/wmparc.stats --pv mri/norm.mgz --excludeid 0 --brainmask mri/brainmask.mgz --in mri/norm.mgz --in-intensity-name norm --in-intensity-units MR --subject sub-09 --surf-wm-vol --ctab /opt/freesurfer/WMParcStatsLUT.txt --etiv # sysname Linux # hostname nid00785 # machine x86_64 # user oesteban # anatomy_type volume # # SUBJECTS_DIR /corral-repl/utexas/poldracklab/data/OpenNeuro/ds000114/derivatives/freesurfer-6.0.1 # subjectname sub-09 # Measure VentricleChoroidVol, VentricleChoroidVol, Volume of ventricles and choroid plexus, 25285.000000, mm^3 # Measure lhCerebralWhiteMatter, lhCerebralWhiteMatterVol, Left hemisphere cerebral white matter volume, 265597.092694, mm^3 # Measure rhCerebralWhiteMatter, rhCerebralWhiteMatterVol, Right hemisphere cerebral white matter volume, 263604.968609, mm^3 # Measure CerebralWhiteMatter, CerebralWhiteMatterVol, Total cerebral white matter volume, 529202.061302, mm^3 # Measure Mask, MaskVol, Mask Volume, 1538303.000000, mm^3 # Measure EstimatedTotalIntraCranialVol, eTIV, Estimated Total Intracranial Volume, 1580916.660390, mm^3 # SegVolFile mri/wmparc.mgz # SegVolFileTimeStamp 2019/10/16 21:20:51 # ColorTable /opt/freesurfer/WMParcStatsLUT.txt # ColorTableTimeStamp 2017/10/20 18:17:30 # InVolFile mri/norm.mgz # InVolFileTimeStamp 2019/10/16 17:25:15 # InVolFrame 0 # PVVolFile mri/norm.mgz # PVVolFileTimeStamp 2019/10/16 17:25:15 # ExcludeSegId 0 # Only reporting non-empty segmentations # VoxelVolume_mm3 1 # TableCol 1 ColHeader Index # TableCol 1 FieldName Index # TableCol 1 Units NA # TableCol 2 ColHeader SegId # TableCol 2 FieldName Segmentation Id # TableCol 2 Units NA # TableCol 3 ColHeader NVoxels # TableCol 3 FieldName Number of Voxels # TableCol 3 Units unitless # TableCol 4 ColHeader Volume_mm3 # TableCol 4 FieldName Volume # TableCol 4 Units mm^3 # TableCol 5 ColHeader StructName # TableCol 5 FieldName Structure Name # TableCol 5 Units NA # TableCol 6 ColHeader normMean # TableCol 6 FieldName Intensity normMean # TableCol 6 Units MR # TableCol 7 ColHeader normStdDev # TableCol 7 FieldName Itensity normStdDev # TableCol 7 Units MR # TableCol 8 ColHeader normMin # TableCol 8 FieldName Intensity normMin # TableCol 8 Units MR # TableCol 9 ColHeader normMax # TableCol 9 FieldName Intensity normMax # TableCol 9 Units MR # TableCol 10 ColHeader normRange # TableCol 10 FieldName Intensity normRange # TableCol 10 Units MR # NRows 70 # NTableCols 10 # ColHeaders Index SegId NVoxels Volume_mm3 StructName normMean normStdDev normMin normMax normRange 1 3001 3333 3293.7 wm-lh-bankssts 96.7420 8.7139 66.0000 114.0000 48.0000 2 3002 3073 3027.2 wm-lh-caudalanteriorcingulate 98.9034 9.6699 56.0000 117.0000 61.0000 3 3003 8620 8443.8 wm-lh-caudalmiddlefrontal 95.3838 9.5436 63.0000 111.0000 48.0000 4 3005 3676 3591.7 wm-lh-cuneus 93.8071 10.6001 64.0000 114.0000 50.0000 5 3006 1273 1332.6 wm-lh-entorhinal 74.7918 10.8395 50.0000 98.0000 48.0000 6 3007 7035 6963.4 wm-lh-fusiform 89.2395 11.9592 21.0000 111.0000 90.0000 7 3008 11884 11861.0 wm-lh-inferiorparietal 94.7322 9.6609 65.0000 115.0000 50.0000 8 3009 8544 8540.2 wm-lh-inferiortemporal 89.1451 11.8415 55.0000 112.0000 57.0000 9 3010 4412 4425.6 wm-lh-isthmuscingulate 99.9481 11.6850 29.0000 119.0000 90.0000 10 3011 10850 10881.7 wm-lh-lateraloccipital 93.3325 10.1959 64.0000 119.0000 55.0000 11 3012 7773 7669.0 wm-lh-lateralorbitofrontal 94.1319 11.4105 52.0000 113.0000 61.0000 12 3013 6178 6146.6 wm-lh-lingual 88.8784 11.0746 16.0000 112.0000 96.0000 13 3014 4375 4253.2 wm-lh-medialorbitofrontal 92.3543 12.7538 45.0000 116.0000 71.0000 14 3015 6632 6716.0 wm-lh-middletemporal 92.8961 11.3399 62.0000 115.0000 53.0000 15 3016 1551 1652.2 wm-lh-parahippocampal 82.9497 10.2886 58.0000 108.0000 50.0000 16 3017 4404 4341.3 wm-lh-paracentral 93.3928 8.8878 63.0000 109.0000 46.0000 17 3018 4349 4303.0 wm-lh-parsopercularis 96.0062 10.8754 66.0000 114.0000 48.0000 18 3019 1191 1201.2 wm-lh-parsorbitalis 90.9631 11.0076 64.0000 111.0000 47.0000 19 3020 2995 2902.3 wm-lh-parstriangularis 92.1025 10.5918 63.0000 113.0000 50.0000 20 3021 4156 3919.2 wm-lh-pericalcarine 89.5888 12.4422 17.0000 112.0000 95.0000 21 3022 8600 8636.9 wm-lh-postcentral 92.6960 10.2769 62.0000 118.0000 56.0000 22 3023 4320 4295.0 wm-lh-posteriorcingulate 98.6891 11.1337 34.0000 118.0000 84.0000 23 3024 13976 13935.4 wm-lh-precentral 94.7405 9.1253 63.0000 116.0000 53.0000 24 3025 11689 11461.8 wm-lh-precuneus 97.1199 10.2230 45.0000 116.0000 71.0000 25 3026 3051 2936.7 wm-lh-rostralanteriorcingulate 89.8384 17.0787 21.0000 120.0000 99.0000 26 3027 13950 13691.9 wm-lh-rostralmiddlefrontal 93.1936 10.6474 60.0000 117.0000 57.0000 27 3028 20372 19978.6 wm-lh-superiorfrontal 91.2157 10.1424 61.0000 116.0000 55.0000 28 3029 11966 11902.4 wm-lh-superiorparietal 95.0079 9.7756 63.0000 115.0000 52.0000 29 3030 9406 9490.5 wm-lh-superiortemporal 94.3337 10.3430 61.0000 116.0000 55.0000 30 3031 8630 8602.4 wm-lh-supramarginal 96.8176 11.0561 64.0000 117.0000 53.0000 31 3032 345 341.9 wm-lh-frontalpole 93.2261 11.2222 70.0000 116.0000 46.0000 32 3033 867 889.6 wm-lh-temporalpole 76.5133 10.8038 53.0000 102.0000 49.0000 33 3034 942 948.0 wm-lh-transversetemporal 93.6391 8.7209 69.0000 114.0000 45.0000 34 3035 10560 10530.1 wm-lh-insula 91.8071 13.1332 47.0000 118.0000 71.0000 35 4001 3097 3027.4 wm-rh-bankssts 96.3933 9.0933 63.0000 113.0000 50.0000 36 4002 2597 2597.6 wm-rh-caudalanteriorcingulate 99.2819 11.0904 57.0000 118.0000 61.0000 37 4003 6936 6836.8 wm-rh-caudalmiddlefrontal 94.0241 9.4984 65.0000 109.0000 44.0000 38 4005 3175 3154.1 wm-rh-cuneus 94.4189 10.3135 64.0000 114.0000 50.0000 39 4006 1082 1144.0 wm-rh-entorhinal 75.6507 9.5975 51.0000 93.0000 42.0000 40 4007 6094 6012.1 wm-rh-fusiform 87.2926 12.4357 44.0000 115.0000 71.0000 41 4008 11558 11476.6 wm-rh-inferiorparietal 94.7707 9.9419 61.0000 116.0000 55.0000 42 4009 8303 8275.0 wm-rh-inferiortemporal 88.0985 12.5138 48.0000 110.0000 62.0000 43 4010 3615 3639.1 wm-rh-isthmuscingulate 101.4515 10.5903 36.0000 118.0000 82.0000 44 4011 11759 11772.1 wm-rh-lateraloccipital 92.6615 10.2744 63.0000 115.0000 52.0000 45 4012 7476 7346.8 wm-rh-lateralorbitofrontal 92.6094 12.4920 51.0000 112.0000 61.0000 46 4013 6413 6319.1 wm-rh-lingual 91.6060 11.3728 20.0000 112.0000 92.0000 47 4014 4405 4316.6 wm-rh-medialorbitofrontal 92.3319 11.4849 44.0000 114.0000 70.0000 48 4015 6971 7040.0 wm-rh-middletemporal 90.1327 11.5956 54.0000 114.0000 60.0000 49 4016 1648 1704.9 wm-rh-parahippocampal 85.4539 9.4002 51.0000 104.0000 53.0000 50 4017 5369 5233.1 wm-rh-paracentral 93.2736 10.0199 62.0000 114.0000 52.0000 51 4018 4214 4145.3 wm-rh-parsopercularis 96.8363 10.8238 65.0000 115.0000 50.0000 52 4019 1383 1395.9 wm-rh-parsorbitalis 89.0253 10.2430 63.0000 107.0000 44.0000 53 4020 3595 3539.1 wm-rh-parstriangularis 92.4584 9.7339 65.0000 110.0000 45.0000 54 4021 4221 3929.2 wm-rh-pericalcarine 89.9713 11.0293 35.0000 110.0000 75.0000 55 4022 8972 9037.1 wm-rh-postcentral 92.3990 10.0955 63.0000 117.0000 54.0000 56 4023 4318 4306.4 wm-rh-posteriorcingulate 98.5387 10.8185 22.0000 117.0000 95.0000 57 4024 15148 15019.8 wm-rh-precentral 93.6489 9.0001 60.0000 115.0000 55.0000 58 4025 11276 11037.5 wm-rh-precuneus 96.6566 9.7126 65.0000 115.0000 50.0000 59 4026 2461 2393.6 wm-rh-rostralanteriorcingulate 98.4970 11.5897 62.0000 116.0000 54.0000 60 4027 13621 13416.0 wm-rh-rostralmiddlefrontal 93.5202 10.4258 61.0000 116.0000 55.0000 61 4028 20503 20092.7 wm-rh-superiorfrontal 91.3095 10.0324 58.0000 115.0000 57.0000 62 4029 11288 11242.7 wm-rh-superiorparietal 94.5341 9.8942 64.0000 116.0000 52.0000 63 4030 7570 7766.5 wm-rh-superiortemporal 92.8387 10.6423 58.0000 117.0000 59.0000 64 4031 9429 9408.2 wm-rh-supramarginal 96.2369 10.8781 65.0000 116.0000 51.0000 65 4032 561 558.1 wm-rh-frontalpole 92.1747 10.8043 65.0000 112.0000 47.0000 66 4033 628 624.9 wm-rh-temporalpole 68.5430 10.1276 47.0000 92.0000 45.0000 67 4034 873 847.8 wm-rh-transversetemporal 94.0160 9.4488 65.0000 112.0000 47.0000 68 4035 10248 10112.5 wm-rh-insula 92.2560 12.9784 34.0000 118.0000 84.0000 69 5001 40266 40430.8 Left-UnsegmentedWhiteMatter 98.7474 11.4862 15.0000 128.0000 113.0000 70 5002 39287 39225.3 Right-UnsegmentedWhiteMatter 99.0053 11.6268 14.0000 122.0000 108.0000