# Title Segmentation Statistics # # generating_program mri_segstats # cvs_version $Id: mri_segstats.c,v 1.121 2016/05/31 17:27:11 greve Exp $ # cmdline mri_segstats --seg mri/wmparc.mgz --sum stats/wmparc.stats --pv mri/norm.mgz --excludeid 0 --brainmask mri/brainmask.mgz --in mri/norm.mgz --in-intensity-name norm --in-intensity-units MR --subject sub-05 --surf-wm-vol --ctab /opt/freesurfer/WMParcStatsLUT.txt --etiv # sysname Linux # hostname nid00779 # machine x86_64 # user oesteban # anatomy_type volume # # SUBJECTS_DIR /corral-repl/utexas/poldracklab/data/OpenNeuro/ds000114/derivatives/freesurfer-6.0.1 # subjectname sub-05 # Measure VentricleChoroidVol, VentricleChoroidVol, Volume of ventricles and choroid plexus, 33868.000000, mm^3 # Measure lhCerebralWhiteMatter, lhCerebralWhiteMatterVol, Left hemisphere cerebral white matter volume, 267611.401211, mm^3 # Measure rhCerebralWhiteMatter, rhCerebralWhiteMatterVol, Right hemisphere cerebral white matter volume, 264838.478004, mm^3 # Measure CerebralWhiteMatter, CerebralWhiteMatterVol, Total cerebral white matter volume, 532449.879215, mm^3 # Measure Mask, MaskVol, Mask Volume, 1666364.000000, mm^3 # Measure EstimatedTotalIntraCranialVol, eTIV, Estimated Total Intracranial Volume, 1726969.647695, mm^3 # SegVolFile mri/wmparc.mgz # SegVolFileTimeStamp 2019/10/16 21:30:09 # ColorTable /opt/freesurfer/WMParcStatsLUT.txt # ColorTableTimeStamp 2017/10/20 18:17:30 # InVolFile mri/norm.mgz # InVolFileTimeStamp 2019/10/16 17:25:40 # InVolFrame 0 # PVVolFile mri/norm.mgz # PVVolFileTimeStamp 2019/10/16 17:25:40 # ExcludeSegId 0 # Only reporting non-empty segmentations # VoxelVolume_mm3 1 # TableCol 1 ColHeader Index # TableCol 1 FieldName Index # TableCol 1 Units NA # TableCol 2 ColHeader SegId # TableCol 2 FieldName Segmentation Id # TableCol 2 Units NA # TableCol 3 ColHeader NVoxels # TableCol 3 FieldName Number of Voxels # TableCol 3 Units unitless # TableCol 4 ColHeader Volume_mm3 # TableCol 4 FieldName Volume # TableCol 4 Units mm^3 # TableCol 5 ColHeader StructName # TableCol 5 FieldName Structure Name # TableCol 5 Units NA # TableCol 6 ColHeader normMean # TableCol 6 FieldName Intensity normMean # TableCol 6 Units MR # TableCol 7 ColHeader normStdDev # TableCol 7 FieldName Itensity normStdDev # TableCol 7 Units MR # TableCol 8 ColHeader normMin # TableCol 8 FieldName Intensity normMin # TableCol 8 Units MR # TableCol 9 ColHeader normMax # TableCol 9 FieldName Intensity normMax # TableCol 9 Units MR # TableCol 10 ColHeader normRange # TableCol 10 FieldName Intensity normRange # TableCol 10 Units MR # NRows 70 # NTableCols 10 # ColHeaders Index SegId NVoxels Volume_mm3 StructName normMean normStdDev normMin normMax normRange 1 3001 1951 1918.4 wm-lh-bankssts 96.8985 10.4451 67.0000 115.0000 48.0000 2 3002 2672 2650.5 wm-lh-caudalanteriorcingulate 99.1119 9.9390 46.0000 116.0000 70.0000 3 3003 7189 7101.3 wm-lh-caudalmiddlefrontal 95.7973 10.6385 59.0000 117.0000 58.0000 4 3005 3157 3084.1 wm-lh-cuneus 92.9569 10.7279 62.0000 115.0000 53.0000 5 3006 1159 1215.5 wm-lh-entorhinal 77.1976 10.4717 52.0000 100.0000 48.0000 6 3007 8018 7847.7 wm-lh-fusiform 90.6774 11.7245 52.0000 112.0000 60.0000 7 3008 11436 11440.1 wm-lh-inferiorparietal 95.1101 10.0126 47.0000 113.0000 66.0000 8 3009 6758 6753.8 wm-lh-inferiortemporal 89.7690 11.9539 56.0000 115.0000 59.0000 9 3010 5115 5118.6 wm-lh-isthmuscingulate 99.8954 11.0254 37.0000 116.0000 79.0000 10 3011 13582 13663.1 wm-lh-lateraloccipital 90.6085 10.9316 57.0000 117.0000 60.0000 11 3012 7456 7388.9 wm-lh-lateralorbitofrontal 93.1424 11.9038 53.0000 114.0000 61.0000 12 3013 6427 6247.4 wm-lh-lingual 86.7422 11.0623 23.0000 110.0000 87.0000 13 3014 3999 3926.6 wm-lh-medialorbitofrontal 87.1938 16.3285 21.0000 122.0000 101.0000 14 3015 6290 6355.1 wm-lh-middletemporal 94.3742 11.2933 57.0000 116.0000 59.0000 15 3016 1764 1846.5 wm-lh-parahippocampal 85.0397 8.9890 54.0000 105.0000 51.0000 16 3017 4223 4195.4 wm-lh-paracentral 94.8998 8.4289 66.0000 110.0000 44.0000 17 3018 4471 4393.3 wm-lh-parsopercularis 96.1344 11.6842 64.0000 116.0000 52.0000 18 3019 1041 1050.2 wm-lh-parsorbitalis 91.0365 10.9521 64.0000 115.0000 51.0000 19 3020 3096 3051.4 wm-lh-parstriangularis 91.7791 10.3758 63.0000 113.0000 50.0000 20 3021 5068 4764.9 wm-lh-pericalcarine 90.6251 9.9195 58.0000 113.0000 55.0000 21 3022 7473 7731.4 wm-lh-postcentral 92.9868 9.4169 65.0000 116.0000 51.0000 22 3023 4661 4656.0 wm-lh-posteriorcingulate 99.6218 10.3837 57.0000 119.0000 62.0000 23 3024 14506 14489.3 wm-lh-precentral 95.3689 9.1929 64.0000 116.0000 52.0000 24 3025 10953 10776.0 wm-lh-precuneus 95.4322 10.2229 43.0000 115.0000 72.0000 25 3026 3023 2925.6 wm-lh-rostralanteriorcingulate 96.2345 10.9375 43.0000 114.0000 71.0000 26 3027 15294 15061.7 wm-lh-rostralmiddlefrontal 93.3434 10.8206 60.0000 126.0000 66.0000 27 3028 17932 17705.4 wm-lh-superiorfrontal 92.2674 10.2557 56.0000 123.0000 67.0000 28 3029 13564 13508.5 wm-lh-superiorparietal 94.7311 9.6600 65.0000 114.0000 49.0000 29 3030 9617 9700.9 wm-lh-superiortemporal 95.9693 10.8308 60.0000 120.0000 60.0000 30 3031 9568 9626.1 wm-lh-supramarginal 97.6710 10.8140 66.0000 121.0000 55.0000 31 3032 294 292.4 wm-lh-frontalpole 97.3673 10.7995 74.0000 119.0000 45.0000 32 3033 786 798.3 wm-lh-temporalpole 75.3003 11.0386 51.0000 99.0000 48.0000 33 3034 975 989.3 wm-lh-transversetemporal 96.0687 8.5297 74.0000 113.0000 39.0000 34 3035 10400 10385.4 wm-lh-insula 91.8697 13.0638 45.0000 123.0000 78.0000 35 4001 2505 2474.1 wm-rh-bankssts 96.1912 8.5158 65.0000 110.0000 45.0000 36 4002 2515 2563.6 wm-rh-caudalanteriorcingulate 100.2151 9.0699 65.0000 115.0000 50.0000 37 4003 6094 5987.3 wm-rh-caudalmiddlefrontal 95.3200 10.3051 63.0000 116.0000 53.0000 38 4005 3256 3220.9 wm-rh-cuneus 93.3882 9.7422 66.0000 114.0000 48.0000 39 4006 763 821.8 wm-rh-entorhinal 73.8296 8.9158 51.0000 96.0000 45.0000 40 4007 7362 7319.8 wm-rh-fusiform 89.5516 11.8469 49.0000 113.0000 64.0000 41 4008 12691 12632.0 wm-rh-inferiorparietal 92.5399 9.8059 60.0000 113.0000 53.0000 42 4009 6260 6304.7 wm-rh-inferiortemporal 88.1185 11.7468 56.0000 113.0000 57.0000 43 4010 4589 4601.8 wm-rh-isthmuscingulate 100.9403 10.3562 20.0000 119.0000 99.0000 44 4011 14220 14178.0 wm-rh-lateraloccipital 89.2488 10.6729 53.0000 118.0000 65.0000 45 4012 8052 7991.4 wm-rh-lateralorbitofrontal 90.8000 12.8146 34.0000 119.0000 85.0000 46 4013 8157 7996.8 wm-rh-lingual 88.7194 12.1720 8.0000 115.0000 107.0000 47 4014 3947 3913.1 wm-rh-medialorbitofrontal 92.2283 12.3063 44.0000 128.0000 84.0000 48 4015 6225 6360.7 wm-rh-middletemporal 92.3216 11.4123 57.0000 115.0000 58.0000 49 4016 1875 1965.7 wm-rh-parahippocampal 86.2555 9.8280 29.0000 106.0000 77.0000 50 4017 5325 5310.8 wm-rh-paracentral 95.8212 8.2318 66.0000 113.0000 47.0000 51 4018 3259 3227.7 wm-rh-parsopercularis 95.2044 11.3119 63.0000 115.0000 52.0000 52 4019 1597 1601.9 wm-rh-parsorbitalis 91.2937 11.5469 62.0000 117.0000 55.0000 53 4020 4015 4004.0 wm-rh-parstriangularis 91.9041 9.9025 64.0000 115.0000 51.0000 54 4021 5003 4705.8 wm-rh-pericalcarine 88.9366 10.1760 34.0000 115.0000 81.0000 55 4022 7482 7770.4 wm-rh-postcentral 91.2892 9.8252 64.0000 114.0000 50.0000 56 4023 4833 4842.2 wm-rh-posteriorcingulate 100.6178 9.8117 65.0000 120.0000 55.0000 57 4024 13279 13292.4 wm-rh-precentral 94.3242 8.7834 62.0000 116.0000 54.0000 58 4025 9810 9663.6 wm-rh-precuneus 95.5972 9.9744 63.0000 116.0000 53.0000 59 4026 1891 1829.8 wm-rh-rostralanteriorcingulate 94.9900 11.2357 61.0000 110.0000 49.0000 60 4027 15590 15598.4 wm-rh-rostralmiddlefrontal 94.1555 10.1681 62.0000 126.0000 64.0000 61 4028 18283 17975.2 wm-rh-superiorfrontal 92.6635 10.0526 61.0000 120.0000 59.0000 62 4029 12083 12108.4 wm-rh-superiorparietal 94.0459 9.7203 57.0000 113.0000 56.0000 63 4030 7915 8150.7 wm-rh-superiortemporal 92.9257 10.4598 61.0000 116.0000 55.0000 64 4031 10643 10534.3 wm-rh-supramarginal 92.8862 11.1256 54.0000 114.0000 60.0000 65 4032 354 365.2 wm-rh-frontalpole 97.3023 11.9516 75.0000 129.0000 54.0000 66 4033 916 930.2 wm-rh-temporalpole 74.8723 11.3591 51.0000 97.0000 46.0000 67 4034 743 737.8 wm-rh-transversetemporal 97.8035 7.1585 74.0000 110.0000 36.0000 68 4035 10163 10154.7 wm-rh-insula 89.6053 13.6296 54.0000 114.0000 60.0000 69 5001 42850 42730.9 Left-UnsegmentedWhiteMatter 98.2544 11.8679 9.0000 120.0000 111.0000 70 5002 39753 39676.2 Right-UnsegmentedWhiteMatter 98.5449 10.9479 15.0000 120.0000 105.0000