[environment]
cpu_count = 20
exec_env = "posix"
free_mem = 59.9
overcommit_policy = "heuristic"
overcommit_limit = "50%"
nipype_version = "1.8.6"
templateflow_version = "24.2.0"
version = "24.1.0.dev28+gfe7c9ff8.d20240822"

[execution]
bids_dir = "/data/datasets/bootcamp/bidsdata"
bids_database_dir = "/home/oesteban/tmp/bootcamp-fmriprep/work/20240902-142152_4e5da58c-02b1-43e6-98e6-a10dbee1c153/bids_db"
bids_description_hash = "8609ad7fd9016bf3a4bfbcfef278a0e3a30f3088ef7710ecca97f93789be84f7"
boilerplate_only = false
sloppy = false
debug = []
fmriprep_dir = "/data/derivatives/bootcamp-geneva/fmriprep-24.0.0"
fs_license_file = "/home/oesteban/.freesurfer.txt"
fs_subjects_dir = "/data/derivatives/bootcamp-geneva/fmriprep-24.0.0/sourcedata/freesurfer"
layout = "BIDS Layout: ...ata/datasets/bootcamp/bidsdata | Subjects: 5 | Sessions: 0 | Runs: 0"
log_dir = "/data/derivatives/bootcamp-geneva/fmriprep-24.0.0/logs"
log_level = 15
low_mem = false
md_only_boilerplate = false
notrack = false
track_carbon = false
country_code = "CAN"
output_dir = "/data/derivatives/bootcamp-geneva/fmriprep-24.0.0"
me_output_echos = false
aggr_ses_reports = 4
output_layout = "bids"
output_spaces = "MNI152NLin2009cAsym:res-native"
reports_only = false
run_uuid = "20240902-142152_4e5da58c-02b1-43e6-98e6-a10dbee1c153"
participant_label = [ "11", "14", "15", "16", "17",]
templateflow_home = "/data/datasets/templateflow-s3"
work_dir = "/home/oesteban/tmp/bootcamp-fmriprep/work"
write_graph = false

[workflow]
anat_only = true
bold2anat_dof = 6
bold2anat_init = "auto"
cifti_output = false
fmap_bspline = false
force_syn = false
hires = true
fs_no_resume = false
ignore = []
level = "full"
longitudinal = false
run_msmsulc = true
medial_surface_nan = false
project_goodvoxels = false
regressors_all_comps = false
regressors_dvars_th = 1.5
regressors_fd_th = 0.5
run_reconall = true
skull_strip_fixed_seed = false
skull_strip_template = "OASIS30ANTs"
skull_strip_t1w = "force"
slice_time_ref = 0.5
spaces = "MNI152NLin2009cAsym:res-native"
use_syn_sdc = false
me_t2s_fit_method = "curvefit"

[nipype]
crashfile_format = "txt"
get_linked_libs = false
nprocs = 8
omp_nthreads = 12
plugin = "MultiProc"
remove_unnecessary_outputs = true
resource_monitor = false
stop_on_first_crash = false

[seeds]
master = 44610
ants = 7861
numpy = 19738

[execution.derivatives]

[execution.dataset_links]
raw = "/data/datasets/bootcamp/bidsdata"
templateflow = "/data/datasets/templateflow-s3"

[nipype.plugin_args]
maxtasksperchild = 1
raise_insufficient = false

[execution.bids_filters.t1w]
acquisition = "denoised"