#!/bin/tcsh # demo real-time data acquisition and motion detection with afni # use environment variables in lieu of running the RT Options plugin setenv AFNI_REALTIME_Registration 3D:_realtime setenv AFNI_REALTIME_Graph Realtime # set outdir = afni set outdir = run1.afni if ( ! -d $outdir ) mkdir $outdir cd $outdir afni -rt & cd .. # return to starting directory sleep 5 echo "" echo "" echo ready to run Dimon echo -n press enter to proceed... set stuff = $< Dimon -rt -pause 400 -infile_prefix ../EPI_run1/8HRBRAIN -quit