#!/bin/bash mkdir ./logs rootpath="$(pwd)/../.." rootpath=$(builtin cd $rootpath; pwd) for subj in $(seq 1 33); do # if ica has not been performed yet if [ ! -f ${rootpath}/data/outputs/eeg/sub-$(printf "%03d" ${subj})*_ica.mat ]; then echo "ICA not performed yet for this subject" echo "#!/bin/bash" > job.slurm echo "#SBATCH --job-name eegmp_ica_${subj}" >> job.slurm echo "#SBATCH --cpus-per-task 8" >> job.slurm echo "#SBATCH --mem 8gb" >> job.slurm echo "#SBATCH --time 24:00:00" >> job.slurm echo "#SBATCH --output ./logs/eegmp_ica_${subj}.out" >> job.slurm echo "#SBATCH --workdir ." >> job.slurm echo "./a3_ica_run.sh /opt/matlab/R2016b ${subj} ${rootpath}" >> job.slurm sbatch job.slurm rm -f job.slurm fi done