[1.05132029124123 0.0711948634917888 0.0143691713178931 3.00931910534634;-0.0718498860374926 1.04422778705002 0.187922411792305 2.00746461722062;-0.000330007662828365 -0.206325163944297 1.12088263667389 -4.28671188780334;0 0 0 1] [1.05132029124123 0.0711948634917888 0.0143691713178931 3.00931910534634;-0.0718498860374926 1.04422778705002 0.187922411792305 2.00746461722062;-0.000330007662828365 -0.206325163944297 1.12088263667389 -4.28671188780334;0 0 0 1] [1 2 3 3 4 4 4 5 5 5 5 6 6] [107.030611741955 156.279002136598 59.3582520861364 119.188546821321 50.1345272722279 11.047406801131 23.1600663982924 123.206470982182 237.724516309787 192.605960150013 124.946300789666 118.897656483748 12.3414665133796] [309.592514522784;52.4614685811049;573.71972059275;1304.47585742624;315.876014683843;18.9615834260633;65.9475357442723;488.866191393054;3057.90326931056;3129.77952663594;1415.36078291051;5129.57692466694;43.7865170802495] -4.8398585319519 [3.00931910534634 2.00746461722062 -4.28671188780334] [0.194171050512647 0.0134940918276353 0.0668916168737422] [1.05377268412319 1.06679447037619 1.13616965611008] [-9.99192241733635e-05 0.00111172249228234 -0.0298838731348679] [3.00931910534634 2.00746461722062 -4.28671188780334] [0.194171050512647 0.0134940918276353 0.0668916168737422] [1.05377268412319 1.06679447037619 1.13616965611008] [-9.99192241733635e-05 0.00111172249228234 -0.0298838731348679] /var/lib/condor/execute/dir_31527/ds/sub-102 sub-102_T1w /var/lib/condor/execute/dir_31527/ds/sub-102/sub-102_T1w.nii /var/lib/condor/execute/dir_31527/ds/sub-102/sub-102_T1w.nii /var/lib/condor/execute/dir_31527/ds/sub-102/mri/msub-102_T1w.nii /var/lib/condor/execute/dir_31527/ds/sub-102/mri/p0sub-102_T1w.nii ..1527/ds/sub-102/sub-102_T1w /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/tpm/TPM.nii [1 1 2 3 4 2] mni [0 0.001 0.5 0.05 0.2] 0.0001 0.5 0.5 0.001 60 3 0 1 0 1.4 2 0.5 0 -Inf 0.5 0.5 0.5 2 0.5 0 1 optimal [1 0.3] ../derivatives/CAT12.8.1_1980 0 32 human 1070 1 1.5 12 Template_T1 /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_1_Dartel.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_0_GS.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_T1_masked.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/brainmask.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/T1.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/cat.nii 0.5 22 1 2 0 1 5 0 0.7 0.1 BCGWHw 2 1 1 1 0 2 10 1 1 /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/neuromorphometrics.nii 0 csf gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/lpba40.nii 0 gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/cobra.nii 0 gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/hammers.nii 0 csf gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/thalamus.nii 0 gm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/suit.nii 0 gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/ibsr.nii 0 csf gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/aal3.nii 1 gm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/mori.nii 1 gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/anatomy3.nii 1 gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/julichbrain.nii 1 gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Schaefer2018_100Parcels_17Networks_order.nii 1 gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Schaefer2018_200Parcels_17Networks_order.nii 1 gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Schaefer2018_400Parcels_17Networks_order.nii 1 gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Schaefer2018_600Parcels_17Networks_order.nii 1 gm wm [false] Desikan /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/atlases_surfaces/lh.aparc_a2009s.freesurfer.annot 0 1 Destrieux /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/atlases_surfaces/lh.aparc_DK40.freesurfer.annot 0 1 HCP /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/atlases_surfaces/lh.aparc_HCP_MMP1.freesurfer.annot 0 0 Schaefer2018_100P_17N /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/atlases_surfaces/lh.Schaefer2018_100Parcels_17Networks_order.annot 1 0 Schaefer2018_200P_17N /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/atlases_surfaces/lh.Schaefer2018_200Parcels_17Networks_order.annot 0 0 Schaefer2018_400P_17N /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/atlases_surfaces/lh.Schaefer2018_400Parcels_17Networks_order.annot 1 0 Schaefer2018_600P_17N /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/atlases_surfaces/lh.Schaefer2018_600Parcels_17Networks_order.annot 1 0 0 1 3 5 7 9 11 13 13 15 17 19 21 23 25 27 0 0 0 /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_0_GS.nii 0.5 [1 0.3] 0 pbt2x /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_1_Dartel.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_2_Dartel.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_3_Dartel.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_4_Dartel.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_5_Dartel.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_6_Dartel.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_0_GS.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_1_GS.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_2_GS.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_3_GS.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_4_GS.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_0_GS.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_1_GS.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_2_GS.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_3_GS.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_4_GS.nii 0 1 1639 34 1.46704024848597 20 0.0730003863573074 0.0829935967922211 [1.09999847412109 1 1] [1.09999847412109 1 1] 1.03440750240073 0 [4.83900022506714 78.9036636352539 98.2738952636719 154.316833496094] [0.0313575640320778 0.511309504508972 0.636831939220428 0.999999940395355] T1 [28.8311133598457 32.8162457839746 17.0519304332183 9.95202489191033] [0.192878842353821 0.219539195299149 0.114076644182205 0.066578596830368] 55.299186706543 0.358348369598389 0.147835582494736 0.393942832946777 [2.19999694824219 2 2] 2.06881500480146 0.5 [8.62400054931641 8.62400054931641 8.62400054931641 8.62400054931641] [8.624 8.624 8.624 8.624] 0.5 2.70810770988464 2.45328140258789 1.4368622303009 2.63265306122449 1.36676006212149 2 1.4600076675415 1.65987193584442 2.31462677632774 voxel dimensions RMS error of voxel size brain next to the image boundary mean within the tissue classes standard deviation within the tissue classes contrast between tissue classes contrast between tissue classes noise to contrast ratio inhomogeneity to contrast ratio average Euler number (characteristic) average area of topological defects average number of defects RMSE of the expected boundary intensity Ym of the IS, OS, and CS RMSE of the expected boundary position Ypp of the IS, OS, and CS Percentual area of self-intersections of the IS and OS. total intracranial volume (GM+WM+VT) relative tissue volume (CSF,GM,WM) relative WMH volume total surface area 1639 LINUX 7771 9.3 12.8.1 1980 /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/cat_vol_qa.m /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/cat_stat_marks.m cat12 20220703-105530 1639 1639 34 1.46704024848597 20 0.0730003863573074 0.0829935967922211 34 1.46704024848597 [279.529321658594 681.450379029906 498.434267805331 0 0] 0.735303685895134 0.000503834896587974 2009.38884748302 1459.41396849383 [0.19153532013064 0.466934258367547 0.341530421501813 0 0] [2.51862452333452 0.611160768637203] [2.52062606811523 0.745655865116092 1] [1.95016311097067 0.256493916094415 0.30473468896643;2.55775915169739 0.1741150861365 0.438605462639875;3.20729841487244 0.271750876406123 0.256659848393695] [0.88379101149303 0.329480030162865 0.58455497382199;4.13183962505071 0.333945986227975 0.41544502617801] 1.08364053762284 [1.28978664027731 6.23588826091141 3.98366417927106 0.5 0.5] 1.0503834896588 8.62177978525056 5.11696625641947 [0.119772992176045 9 3 10819.0987921295 0.47719301562095] [false] [0.0391949936747551 0.0407667011022568 0.0817375406622887] [false] [889.445699917932 483.810077111098 584.708239501684 2961.68531832174 2032.95116270728 6176.3397833807] [700.319334424187 475.827271713975 266.160397458394 2708.45468253548 1812.8763530853 6327.7621223526] [39.9169006347656 102.432403564453 155.819702148438] [0 4.38185119628906 5.97105312347412 39.9169006347656 102.432403564453 155.819702148438 213.771102905273 605.501892089844] [0 0.02 0.05 1 2 3 4 5] 16 1.5 3 0.5 [1 1 1 1 1] 0.015 [0.03 0.03 0.03 0.03 0.03;0.03 0.03 0.03 0.03 0.03;0.03 0.03 0.03 0.03 0.03;0.03 0.03 0.03 0.03 0.03;0.03 0.03 0.03 0.03 0.03] 15 0 2 1 Shooting_Template_0_GS_tr1.5_rr3.0-3.0_or1.5_regstr15.0 [0.0171221662312746 0.0653883516788483 0.0717590600252151 0 0] [0.0862317644342893 0 0.0862317644342893 0;0.211342654737676 0.00981703411345007 0.221159688851126 2093.462890625;0.211342654737676 0.00981703411345007 0.221159688851126 2093.462890625] [0.0394476018846035 0.0876588374376297 0.100099734961987] [0.0287005510181189 0.0456562004983425 0.0580701529979706] 0.100099734961987

0.0717590600252151

64 1.5 1.5 0.25 [1.66666666666667 1.5 1.33333333333333 1.16666666666667 1] 0.051 [0.0501 0.0501 0.0501 0.0501 0.0501;0.0501 0.0501 0.0501 0.0501 0.0501;0.0501 0.0501 0.0501 0.0501 0.0501;0.0501 0.0501 0.0501 0.0501 0.0501;0.0501 0.0501 0.0501 0.0501 0.0501] 0.5 0 2 1 Shooting_Template_0_GS_tr1.5_rr2.5-1.5_or1.5_regstr0.5 [0.00975510198622942 0.0547905527055264 0.0575270690023899 0.0698275938630104 0.0791114717721939 0.108662977814674] [0.0952366894029126 0 0.0952366894029126 0;0.223173489010989 0.0289540388431013 0.25212752785409 14820.8486328125;0.216281890360311 0.0281795986623816 0.244461489022692 20281.1953125;0.187347832341932 0.029020970589981 0.216368802931913 31292.5;0.166610133860919 0.0332053255903754 0.199815459451294 58087.8359375;0.166610133860919 0.0332053255903754 0.199815459451294 58087.8359375] [0.0126624424010515 0.0566890873014927 0.1225920394063 0.190439879894257 1.6268447637558 0.377339661121368] [0.00461173476651311 0.023442517966032 0.0604386366903782 0.102539837360382 2.0431764125824 0.234630927443504] 0.377339661121368

0.108662977814674

------------------------------------------------------------------------ CAT12.8.1 r1980: 1/1: ./execute/dir_31527/ds/sub-102/sub-102_T1w.n ------------------------------------------------------------------------ SANLM denoising (medium): 98s APP: Rough bias correction: Initialize 6s Estimate background 10s Initial correction 8s Refine background 4s Final correction 6s Final scaling 9s 50s Correct center-of-mass 12s Affine registration 8s SPM preprocessing 1 (estimate 1 - TPM registration): 6s Use initial fine affine registration. 7s Use previous fine affine registration. 51s SPM preprocessing 1 (estimate 2): 48s SPM preprocessing 2 (write): Write Segmentation 15s Update Segmentation 18s Update Skull-Stripping 38s Update probability maps 9s 81s Global intensity correction: 15s SANLM denoising after intensity normalization (medium): 13s Fast Optimized Shooting registration 32s Local adaptive segmentation (LASstr=0.50): Prepare maps 3s Prepare partitions 2s Prepare segments (LASmod = 1.01) 13s Estimate local tissue thresholds (WM) 18s Estimate local tissue thresholds (GM) 24s Intensity transformation 0s SANLM denoising after LAS (medium) 27s 90s ROI segmentation (partitioning): Atlas -> subject space 7s Major structures 3s Ventricle detection 13s Blood vessel detection 8s WMH detection (WMHCstr=0.48 > WMHCstr'=0.00) 27s Manual stroke lesion detection 0s Closing of deep structures 1s Side alignment 3s Final corrections 4s 66s Blood vessel correction (BVCstr=0.50): 1s Amap using initial SPM12 segmentations (MRF filter strength 0.05): 28s AMAP peaks: [CSF,GM,WM] = [0.36 0.05,0.67 0.08,0.98 0.05] Final cleanup (gcutstr=0.24): Level 1 cleanup (ROI estimation) 4s Level 1 cleanup (brain masking) 2s Level 2 cleanup (CSF correction) 1s Level 3 cleanup (CSF/WM PVE) 2s 10s Optimized Shooting registration with 2.50:-0.25:1.50 mm (regstr=0.50): Template: "/code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_0_GS.nii" 1 | 2.50 | 0.0952 0.0000 0.0952 | 32.0000 2 | 2.50 | 0.0913 0.0015 0.0928 | 29.4886 3 | 2.50 | 0.0901 0.0024 0.0925 | 26.9772 4 | 2.50 | 0.0894 0.0028 0.0922 | 24.6107 5 | 2.50 | 0.0889 0.0031 0.0919 | 22.6548 6 | 2.50 | 0.0884 0.0033 0.0916 | 20.6989 7 | 2.50 | 0.0879 0.0034 0.0913 | 18.9688 8 | 2.50 | 0.0874 0.0036 0.0910 | 17.4455 9 | 2.50 | 0.0869 0.0038 0.0907 | 15.9223 10 | 2.50 | 0.0864 0.0040 0.0904 | 14.6627 11 | 2.50 | 0.0858 0.0042 0.0900 | 13.4764 12 | 2.50 | 0.0853 0.0043 0.0896 | 12.3015 13 | 2.50 | 0.0847 0.0045 0.0892 | 11.3776 14 | 2.50 | 0.0841 0.0047 0.0888 | 10.4537 15 | 2.25 | 0.0889 0.0048 0.0937 | 9.5920 16 | 2.25 | 0.0844 0.0073 0.0917 | 8.8725 17 | 2.25 | 0.0825 0.0082 0.0906 | 8.1530 18 | 2.25 | 0.0811 0.0086 0.0897 | 7.5234 19 | 2.25 | 0.0800 0.0089 0.0889 | 6.9630 20 | 2.25 | 0.0790 0.0091 0.0881 | 6.4027 21 | 2.25 | 0.0780 0.0093 0.0873 | 5.9447 22 | 2.25 | 0.0771 0.0094 0.0865 | 5.5083 23 | 2.25 | 0.0762 0.0094 0.0857 | 5.0803 24 | 2.25 | 0.0752 0.0096 0.0848 | 4.7404 25 | 2.25 | 0.0744 0.0097 0.0840 | 4.4005 29 | 2.00 | 0.0759 0.0077 0.0836 | 3.3283 30 | 2.00 | 0.0721 0.0094 0.0815 | 3.1221 43 | 1.75 | 0.0710 0.0052 0.0762 | 1.5785 44 | 1.75 | 0.0648 0.0084 0.0732 | 1.5194 45 | 1.75 | 0.0624 0.0097 0.0721 | 1.4626 57 | 1.50 | 0.0613 0.0074 0.0687 | 1.0900 Problem with Shooting (dets: 0.00174764 .. 2.43709) 58 | 1.50 | 0.0571 0.0102 0.0673 | 1.0730 59 | 1.50 | 0.0555 0.0111 0.0666 | 1.0579 Shooting registration with 2.50:-0.25:1.50 mm takes: 179s Prepare output 10s 188s Jacobian determinant (RMS): 0.013 0.057 0.123 0.190 1.627 | 0.377340 Template Matching: 0.095 0.223 0.216 0.187 0.167 | 0.166610 Write result maps: 23s Surface and thickness estimation: lh: Thickness estimation (0.50 mm ): WM distance: 33s CSF distance: 16s PBT2x thickness: 47s 103s Create initial surface 87s Topology correction: 95s Surface refinement: 88s Reduction of surface collisions with optimization: 79s Spherical mapping with areal smoothing 87s Spherical registration 292s rh: Thickness estimation (0.50 mm ): WM distance: 35s CSF distance: 15s PBT2x thickness: 44s 100s Create initial surface 83s Topology correction: 93s Surface refinement: 79s Reduction of surface collisions with optimization: 73s Spherical mapping with areal smoothing 82s Spherical registration 283s Final surface processing results: Average thickness (FS): 2.5187 0.6105 mm Surface intensity / position RMSE: 0.0730 / 0.0830 Euler number / defect number / defect size: 34.0 / 20.0 / 1.47% Display thickness: /var/lib/condor/execute/dir_31527/ds/sub-102/surf/lh.thickness.sub-102_T1w Display thickness: /var/lib/condor/execute/dir_31527/ds/sub-102/surf/rh.thickness.sub-102_T1w Show surfaces in orthview: /var/lib/condor/execute/dir_31527/ds/sub-102/sub-102_T1w.nii Surface ROI estimation: 7s Surface and thickness estimation takes: 1717s ROI estimation in native space: ROI estimation of 'cobra' atlas 7s ROI estimation of 'neuromorphometrics' atlas 24s ROI estimation of 'lpba40' atlas 7s ROI estimation of 'hammers' atlas 17s ROI estimation of 'thalamus' atlas 1s ROI estimation of 'ibsr' atlas 6s ROI estimation of 'aal3' atlas 11s ROI estimation of 'mori' atlas 15s ROI estimation of 'anatomy3' atlas 22s ROI estimation of 'julichbrain' atlas 30s ROI estimation of 'Schaefer2018_100Parcels_17Networks_order' atlas 12s ROI estimation of 'Schaefer2018_200Parcels_17Networks_order' atlas 21s ROI estimation of 'Schaefer2018_400Parcels_17Networks_order' atlas 47s ROI estimation of 'Schaefer2018_600Parcels_17Networks_order' atlas 71s Write results 71s 292s Quality check: 4s Print 'Graphics' figure to: /var/lib/condor/execute/dir_31527/ds/sub-102/report/catreport_sub-102_T1w.pdf ------------------------------------------------------------------------ CAT preprocessing takes 48 minute(s) and 36 second(s). Image Quality Rating (IQR): 81.85% (B-) GM volume (GMV): 46.69% (681.45 / 1459.41 ml) GM thickness (GMT): 2.52 0.61 mm Segmentations are saved in /var/lib/condor/execute/dir_31527/ds/sub-102/mri Reports are saved in /var/lib/condor/execute/dir_31527/ds/sub-102/report Labels are saved in /var/lib/condor/execute/dir_31527/ds/sub-102/label ------------------------------------------------------------------------