[1.10782484619227 -0.0587454835820324 -0.0209847606870901 0.882571514417401;0.0732346448462214 0.924821592286785 0.461290190223148 -3.47414802124656;-0.00524733039374874 -0.459488515626825 1.02213829477531 44.1572599047596;0 0 0 1] [1.10782484619227 -0.0587454835820324 -0.0209847606870901 0.882571514417401;0.0732346448462214 0.924821592286785 0.461290190223148 -3.47414802124656;-0.00524733039374874 -0.459488515626825 1.02213829477531 44.1572599047596;0 0 0 1] [1 2 3 3 4 4 4 5 5 5 5 6 6] [871.373412140888 1089.90226696995 395.167208942397 613.022104605938 261.924109975398 68.5649154052361 136.499890851177 776.807210472314 920.510200333488 719.353652555884 755.493345962498 1215.99245644936 812.098162854781] [7859.04637440248;1759.97629031636;5707.1378452827;8104.71663084156;7669.9450910841;651.006847738044;2060.13689922227;49112.7251754221;134590.136925932;57220.5561443023;48687.2556730737;99165.2268262502;300497.893919359] -6.59352731704712 [0.882571514417401 -3.47414802124656 44.1572599047596] [0.459689570776267 -0.0250793945358759 -0.0612496714264071] [1.1102552578227 1.0343379194031 1.12086478163688] [0.00410521549991687 0.00419536479185294 -0.0391063765034041] [0.882571514417401 -3.47414802124656 44.1572599047596] [0.459689570776267 -0.0250793945358759 -0.0612496714264071] [1.1102552578227 1.0343379194031 1.12086478163688] [0.00410521549991687 0.00419536479185294 -0.0391063765034041] /var/lib/condor/execute/dir_15318/ds/sub-f5001ob sub-f5001ob_ses-wave1bas_T1w /var/lib/condor/execute/dir_15318/ds/sub-f5001ob/sub-f5001ob_ses-wave1bas_T1w.nii /var/lib/condor/execute/dir_15318/ds/sub-f5001ob/sub-f5001ob_ses-wave1bas_T1w.nii /var/lib/condor/execute/dir_15318/ds/sub-f5001ob/mri/msub-f5001ob_ses-wave1bas_T1w.nii /var/lib/condor/execute/dir_15318/ds/sub-f5001ob/mri/p0sub-f5001ob_ses-wave1bas_T1w.nii ../ds/sub-f5001ob/sub-f5001ob_ses-wave1bas_T1w /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/tpm/TPM.nii [1 1 2 3 4 2] mni [0 0.001 0.5 0.05 0.2] 0.0001 0.5 0.5 0.001 60 3 0 1 0 1.4 2 0.5 0 -Inf 0.5 0.5 0.5 2 0.5 0 1 optimal [1 0.3] ../derivatives/CAT12.8.1_1980 0 32 human 1070 1 1.5 12 Template_T1 /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_1_Dartel.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_0_GS.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_T1_masked.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/brainmask.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/T1.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/cat.nii 0.5 22 1 2 0 1 5 0 0.7 0.1 BCGWHw 2 1 1 1 0 2 10 1 1 /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/neuromorphometrics.nii 0 csf gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/lpba40.nii 0 gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/cobra.nii 0 gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/hammers.nii 0 csf gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/thalamus.nii 0 gm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/suit.nii 0 gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/ibsr.nii 0 csf gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/aal3.nii 1 gm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/mori.nii 1 gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/anatomy3.nii 1 gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/julichbrain.nii 1 gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Schaefer2018_100Parcels_17Networks_order.nii 1 gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Schaefer2018_200Parcels_17Networks_order.nii 1 gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Schaefer2018_400Parcels_17Networks_order.nii 1 gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Schaefer2018_600Parcels_17Networks_order.nii 1 gm wm [false] Desikan /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/atlases_surfaces/lh.aparc_a2009s.freesurfer.annot 0 1 Destrieux /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/atlases_surfaces/lh.aparc_DK40.freesurfer.annot 0 1 HCP /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/atlases_surfaces/lh.aparc_HCP_MMP1.freesurfer.annot 0 0 Schaefer2018_100P_17N /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/atlases_surfaces/lh.Schaefer2018_100Parcels_17Networks_order.annot 1 0 Schaefer2018_200P_17N /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/atlases_surfaces/lh.Schaefer2018_200Parcels_17Networks_order.annot 0 0 Schaefer2018_400P_17N /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/atlases_surfaces/lh.Schaefer2018_400Parcels_17Networks_order.annot 1 0 Schaefer2018_600P_17N /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/atlases_surfaces/lh.Schaefer2018_600Parcels_17Networks_order.annot 1 0 0 1 3 5 7 9 11 13 13 15 17 19 21 23 25 27 0 0 0 /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_0_GS.nii 0.5 [1 0.3] 0 pbt2x /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_1_Dartel.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_2_Dartel.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_3_Dartel.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_4_Dartel.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_5_Dartel.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_6_Dartel.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_0_GS.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_1_GS.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_2_GS.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_3_GS.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_4_GS.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_0_GS.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_1_GS.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_2_GS.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_3_GS.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_4_GS.nii 0 1 1639 14 0.579967039583145 12 0.065896600484848 0.066158153116703 [0.800001902243846 0.800000018253861 0.799999967543047] [0.800001902840376 0.800000018576023 0.799999978477052] 0.800000629347425 0 [22.3899993896484 287.873260498047 823.254577636719 1029.37170410156] [0.021751131862402 0.279659181833267 0.799764096736908 1] T1 [51.0391938437579 145.177241045245 105.125039476521 58.1872156204135] [0.0506853200495243 0.144170671701431 0.104396171867847 0.0577837824821472] 210.700103759766 0.204688057303429 0.115536265075207 1.15176510810852 [1.60000380448769 1.60000003650772 1.59999993508609] 1.60000125869485 0.5 [8.62400054931641 8.62400054931641 8.62400054931641 8.62400054931641] [8.624 8.624 8.624 8.624] 0.5 5.01301240921021 1.98961043357849 3.31638169288635 1.61224489795918 1.14499175989579 1.6 1.31793200969696 1.32316303253174 1.86161530799838 voxel dimensions RMS error of voxel size brain next to the image boundary mean within the tissue classes standard deviation within the tissue classes contrast between tissue classes contrast between tissue classes noise to contrast ratio inhomogeneity to contrast ratio average Euler number (characteristic) average area of topological defects average number of defects RMSE of the expected boundary intensity Ym of the IS, OS, and CS RMSE of the expected boundary position Ypp of the IS, OS, and CS Percentual area of self-intersections of the IS and OS. total intracranial volume (GM+WM+VT) relative tissue volume (CSF,GM,WM) relative WMH volume total surface area 1639 LINUX 7771 9.3 12.8.1 1980 /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/cat_vol_qa.m /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/cat_stat_marks.m cat12 20220709-224605 1639 1639 14 0.579967039583145 12 0.065896600484848 0.066158153116703 14 0.579967039583145 [167.73761786728 602.692400910777 557.139965953598 0 0] 2.17297532522059 0.00163680660922733 1798.24033631012 1327.56998473166 [0.126349359955728 0.453981641527246 0.419668998517027 0 0] [2.48079374829963 0.626274033951893] [2.50258183479309 0.791196638191587 1] [1.82677407673847 0.275054965108575 0.263335268546183;2.48595506960068 0.178075662269761 0.432350150805001;3.11960788053194 0.273414024239297 0.304314580648816] [0.76331805370242 0.310504129040366 0.57732818854938;4.11261946032026 0.370077524322591 0.42267181145062] 1.12396954179805 [0.5 6.00326224007266 5.38701505957303 0.5 0.5] 1.16368066092273 8.58438409912643 5.12942041968492 [0.147906199919872 1 1 8711.50036753576 0.426519721603503] [false] [0.0228851046413183 0.018102278932929 0.368009775876999] [false] [696.962239470909 534.592221488188 251.819674303432 983.926177190028 3174.02768005547 5125.69951299727] [604.326953749476 505.370294207815 160.396984151941 911.509124770367 2871.47851969224 5170.60299946426] [371.154602050781 852.687683105469 1089.91052246094] [0 2.82000732421875 21.6543426513672 371.154602050781 852.687683105469 1089.91052246094 1449.28845214844 3055.87719726562] [0 0.02 0.05 1 2 3 4 5] 16 1.5 3 0.5 [1 1 1 1 1] 0.015 [0.03 0.03 0.03 0.03 0.03;0.03 0.03 0.03 0.03 0.03;0.03 0.03 0.03 0.03 0.03;0.03 0.03 0.03 0.03 0.03;0.03 0.03 0.03 0.03 0.03] 15 0 2 1 Shooting_Template_0_GS_tr1.5_rr3.0-3.0_or1.5_regstr15.0 [0.024697070941329 0.0920482352375984 0.102006413042545 0 0] [0.0852161115911208 0 0.0852161115911208 0;0.183734119868651 0.0126105259303428 0.196344645798993 2689.16943359375;0.183734119868651 0.0126105259303428 0.196344645798993 2689.16943359375] [0.0514902621507645 0.115552984178066 0.12705971300602] [0.0366240218281746 0.0520480684936047 0.0624798350036144] 0.12705971300602

0.102006413042545

64 1.5 1.5 0.25 [1.66666666666667 1.5 1.33333333333333 1.16666666666667 1] 0.051 [0.0501 0.0501 0.0501 0.0501 0.0501;0.0501 0.0501 0.0501 0.0501 0.0501;0.0501 0.0501 0.0501 0.0501 0.0501;0.0501 0.0501 0.0501 0.0501 0.0501;0.0501 0.0501 0.0501 0.0501 0.0501] 0.5 0 2 1 Shooting_Template_0_GS_tr1.5_rr2.5-1.5_or1.5_regstr0.5 [0.0120618129149079 0.0490657426416874 0.0660874620079994 0.0756154358386993 0.0819574669003487 0.093963161110878] [0.0837761855651665 0 0.0837761855651665 0;0.203003632478632 0.020720012973138 0.22372364545177 10606.056640625;0.178554787800537 0.0206177088891112 0.199172496689648 14838.8125;0.157680746949749 0.0207458108465443 0.178426557796294 22369.626953125;0.14117395295575 0.0226027918428985 0.163776744798648 39540.26171875;0.14117395295575 0.0226027918428985 0.163776744798648 39540.26171875] [0.013993221335113 0.0525849685072899 0.0806971862912178 0.109253689646721 0.133843302726746 0.141636788845062] [0.00406933110207319 0.0164646729826927 0.0340538136661053 0.0550323650240898 0.0723099708557129 0.0777890235185623] 0.141636788845062

0.093963161110878

------------------------------------------------------------------------ CAT12.8.1 r1980: 1/1: ./ds/sub-f5001ob/sub-f5001ob_ses-wave1bas_T1w.n ------------------------------------------------------------------------ SANLM denoising (medium): 157s APP: Rough bias correction: Initialize 11s Estimate background 10s Initial correction 11s Refine background 5s Final correction 10s Final scaling 11s 69s Correct center-of-mass 5s Affine registration 18s SPM preprocessing 1 (estimate 1 - TPM registration): 122s SPM preprocessing 1 (estimate 2): 44s SPM preprocessing 2 (write): Write Segmentation 26s Update Segmentation 31s Update Skull-Stripping 68s Update probability maps 15s 141s Global intensity correction: 27s SANLM denoising after intensity normalization (medium): 35s Fast Optimized Shooting registration 41s Local adaptive segmentation (LASstr=0.50): Prepare maps 7s Prepare partitions 3s Prepare segments (LASmod = 1.00) 24s Estimate local tissue thresholds (WM) 31s Estimate local tissue thresholds (GM) 40s Intensity transformation 0s SANLM denoising after LAS (medium) 69s 182s ROI segmentation (partitioning): Atlas -> subject space 13s Major structures 6s Ventricle detection 26s Blood vessel detection 17s WMH detection (WMHCstr=0.50 > WMHCstr'=0.00) 58s Manual stroke lesion detection 0s Closing of deep structures 3s Side alignment 7s Final corrections 7s 137s Blood vessel correction (BVCstr=0.50): 3s Amap using initial SPM12 segmentations (MRF filter strength 0.06): 50s AMAP peaks: [CSF,GM,WM] = [0.36 0.06,0.68 0.07,0.98 0.04] Final cleanup (gcutstr=0.25): Level 1 cleanup (ROI estimation) 8s Level 1 cleanup (brain masking) 4s Level 2 cleanup (CSF correction) 2s Level 3 cleanup (CSF/WM PVE) 5s 19s Optimized Shooting registration with 2.50:-0.25:1.50 mm (regstr=0.50): Template: "/code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_0_GS.nii" 1 | 2.50 | 0.0838 0.0000 0.0838 | 32.0000 2 | 2.50 | 0.0800 0.0015 0.0815 | 29.4886 3 | 2.50 | 0.0788 0.0024 0.0812 | 26.9772 4 | 2.50 | 0.0783 0.0027 0.0809 | 24.6107 5 | 2.50 | 0.0778 0.0029 0.0807 | 22.6548 6 | 2.50 | 0.0774 0.0031 0.0805 | 20.6989 7 | 2.50 | 0.0770 0.0032 0.0802 | 18.9688 8 | 2.50 | 0.0766 0.0034 0.0799 | 17.4455 9 | 2.50 | 0.0761 0.0035 0.0796 | 15.9223 10 | 2.50 | 0.0757 0.0036 0.0793 | 14.6627 11 | 2.50 | 0.0752 0.0038 0.0790 | 13.4764 12 | 2.50 | 0.0748 0.0038 0.0786 | 12.3015 13 | 2.50 | 0.0743 0.0040 0.0783 | 11.3776 14 | 2.50 | 0.0738 0.0041 0.0779 | 10.4537 15 | 2.25 | 0.0732 0.0042 0.0774 | 9.5920 16 | 2.25 | 0.0693 0.0062 0.0755 | 8.8725 17 | 2.25 | 0.0677 0.0069 0.0746 | 8.1530 29 | 2.00 | 0.0681 0.0032 0.0713 | 3.3283 30 | 2.00 | 0.0617 0.0059 0.0675 | 3.1221 31 | 2.00 | 0.0595 0.0069 0.0664 | 2.9160 43 | 1.75 | 0.0581 0.0040 0.0621 | 1.5785 44 | 1.75 | 0.0539 0.0062 0.0601 | 1.5194 45 | 1.75 | 0.0526 0.0069 0.0595 | 1.4626 57 | 1.50 | 0.0508 0.0051 0.0559 | 1.0900 58 | 1.50 | 0.0480 0.0069 0.0549 | 1.0730 59 | 1.50 | 0.0471 0.0075 0.0546 | 1.0579 Shooting registration with 2.50:-0.25:1.50 mm takes: 158s Prepare output 14s 172s Jacobian determinant (RMS): 0.014 0.053 0.081 0.109 0.134 | 0.141637 Template Matching: 0.084 0.203 0.179 0.158 0.141 | 0.141174 Write result maps: 36s Surface and thickness estimation: lh: Thickness estimation (0.50 mm ): WM distance: 39s CSF distance: 13s PBT2x thickness: 39s 96s Create initial surface 75s Topology correction: 73s Surface refinement: 77s Reduction of surface collisions with optimization: 57s Spherical mapping with areal smoothing 82s Spherical registration 319s rh: Thickness estimation (0.50 mm ): WM distance: 33s CSF distance: 13s PBT2x thickness: 40s 92s Create initial surface 75s Topology correction: 83s Surface refinement: 82s Reduction of surface collisions with optimization: 53s Spherical mapping with areal smoothing 67s Spherical registration 273s Final surface processing results: Average thickness (FS): 2.4808 0.6262 mm Surface intensity / position RMSE: 0.0659 / 0.0662 Euler number / defect number / defect size: 14.0 / 12.0 / 0.58% Display thickness: /var/lib/condor/execute/dir_15318/ds/sub-f5001ob/surf/lh.thickness.sub-f5001ob_ses-wave1bas_T1w Display thickness: /var/lib/condor/execute/dir_15318/ds/sub-f5001ob/surf/rh.thickness.sub-f5001ob_ses-wave1bas_T1w Show surfaces in orthview: /var/lib/condor/execute/dir_15318/ds/sub-f5001ob/sub-f5001ob_ses-wave1bas_T1w.nii Surface ROI estimation: 7s Surface and thickness estimation takes: 1607s ROI estimation in native space: ROI estimation of 'cobra' atlas 13s ROI estimation of 'neuromorphometrics' atlas 50s ROI estimation of 'lpba40' atlas 15s ROI estimation of 'hammers' atlas 35s ROI estimation of 'thalamus' atlas 3s ROI estimation of 'ibsr' atlas 12s ROI estimation of 'aal3' atlas 20s ROI estimation of 'mori' atlas 30s ROI estimation of 'anatomy3' atlas 42s ROI estimation of 'julichbrain' atlas 58s ROI estimation of 'Schaefer2018_100Parcels_17Networks_order' atlas 23s ROI estimation of 'Schaefer2018_200Parcels_17Networks_order' atlas 40s ROI estimation of 'Schaefer2018_400Parcels_17Networks_order' atlas 94s ROI estimation of 'Schaefer2018_600Parcels_17Networks_order' atlas 130s Write results 131s 566s Quality check: 8s Print 'Graphics' figure to: /var/lib/condor/execute/dir_15318/ds/sub-f5001ob/report/catreport_sub-f5001ob_ses-wave1bas_T1w.pdf ------------------------------------------------------------------------ CAT preprocessing takes 60 minute(s) and 10 second(s). Image Quality Rating (IQR): 86.38% (B) GM volume (GMV): 45.40% (602.69 / 1327.57 ml) GM thickness (GMT): 2.48 0.63 mm Segmentations are saved in /var/lib/condor/execute/dir_15318/ds/sub-f5001ob/mri Reports are saved in /var/lib/condor/execute/dir_15318/ds/sub-f5001ob/report Labels are saved in /var/lib/condor/execute/dir_15318/ds/sub-f5001ob/label ------------------------------------------------------------------------