[1.08140528113357 -0.045831899951621 0.0150867495126331 8.92478655226796;0.0310035031452703 0.947432027321098 0.385561934737528 -20.266910334841;-0.0333984600178325 -0.397090033085693 1.10036281108607 34.9788506920489;0 0 0 1] [1.08140528113357 -0.045831899951621 0.0150867495126331 8.92478655226796;0.0310035031452703 0.947432027321098 0.385561934737528 -20.266910334841;-0.0333984600178325 -0.397090033085693 1.10036281108607 34.9788506920489;0 0 0 1] [1 2 3 3 4 4 4 5 5 5 5 6 6] [755.740036696705 960.278239719217 300.965941563024 471.877935014534 205.70052622149 60.7304192457023 114.232975159299 617.618211877348 1063.03175809269 797.079832069924 556.748802741695 1013.10012841622 458.222900939726] [6752.89984671652;1571.88940823966;2117.88669652614;9909.1648396692;4224.31037226089;496.076223297479;1309.7230495994;31715.1909522743;105065.68667738;10365.1296898984;18183.1710608148;15763.1942937151;163464.431573996] -6.47550582885742 [8.92478655226796 -20.266910334841 34.9788506920489] [0.397656837052602 0.0173701129910395 -0.0383681779274901] [1.08236502918489 1.02828378670984 1.16390136613215] [-0.00591281955324405 -0.00724000028030595 -0.0684634074219414] [8.92478655226796 -20.266910334841 34.9788506920489] [0.397656837052602 0.0173701129910395 -0.0383681779274901] [1.08236502918489 1.02828378670984 1.16390136613215] [-0.00591281955324405 -0.00724000028030595 -0.0684634074219414] /var/lib/condor/execute/dir_52325/ds/sub-f5416zj sub-f5416zj_ses-wave1bas_T1w /var/lib/condor/execute/dir_52325/ds/sub-f5416zj/sub-f5416zj_ses-wave1bas_T1w.nii /var/lib/condor/execute/dir_52325/ds/sub-f5416zj/sub-f5416zj_ses-wave1bas_T1w.nii /var/lib/condor/execute/dir_52325/ds/sub-f5416zj/mri/msub-f5416zj_ses-wave1bas_T1w.nii /var/lib/condor/execute/dir_52325/ds/sub-f5416zj/mri/p0sub-f5416zj_ses-wave1bas_T1w.nii ../ds/sub-f5416zj/sub-f5416zj_ses-wave1bas_T1w /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/tpm/TPM.nii [1 1 2 3 4 2] mni [0 0.001 0.5 0.05 0.2] 0.0001 0.5 0.5 0.001 60 3 0 1 0 1.4 2 0.5 0 -Inf 0.5 0.5 0.5 2 0.5 0 1 optimal [1 0.3] ../derivatives/CAT12.8.1_1980 0 64 human 1070 1 1.5 12 Template_T1 /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_1_Dartel.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_0_GS.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_T1_masked.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/brainmask.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/T1.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/cat.nii 0.5 22 1 2 0 1 5 0 0.7 0.1 BCGWHw 2 1 1 1 0 2 10 1 1 /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/neuromorphometrics.nii 0 csf gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/lpba40.nii 0 gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/cobra.nii 0 gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/hammers.nii 0 csf gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/thalamus.nii 0 gm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/suit.nii 0 gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/ibsr.nii 0 csf gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/aal3.nii 1 gm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/mori.nii 1 gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/anatomy3.nii 1 gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/julichbrain.nii 1 gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Schaefer2018_100Parcels_17Networks_order.nii 1 gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Schaefer2018_200Parcels_17Networks_order.nii 1 gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Schaefer2018_400Parcels_17Networks_order.nii 1 gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Schaefer2018_600Parcels_17Networks_order.nii 1 gm wm [false] Desikan /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/atlases_surfaces/lh.aparc_a2009s.freesurfer.annot 0 1 Destrieux /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/atlases_surfaces/lh.aparc_DK40.freesurfer.annot 0 1 HCP /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/atlases_surfaces/lh.aparc_HCP_MMP1.freesurfer.annot 0 0 Schaefer2018_100P_17N /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/atlases_surfaces/lh.Schaefer2018_100Parcels_17Networks_order.annot 1 0 Schaefer2018_200P_17N /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/atlases_surfaces/lh.Schaefer2018_200Parcels_17Networks_order.annot 0 0 Schaefer2018_400P_17N /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/atlases_surfaces/lh.Schaefer2018_400Parcels_17Networks_order.annot 1 0 Schaefer2018_600P_17N /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/atlases_surfaces/lh.Schaefer2018_600Parcels_17Networks_order.annot 1 0 0 1 3 5 7 9 11 13 13 15 17 19 21 23 25 27 0 0 0 /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_0_GS.nii 0.5 [1 0.3] 0 pbt2x /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_1_Dartel.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_2_Dartel.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_3_Dartel.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_4_Dartel.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_5_Dartel.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_6_Dartel.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_0_GS.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_1_GS.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_2_GS.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_3_GS.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_4_GS.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_0_GS.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_1_GS.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_2_GS.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_3_GS.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_4_GS.nii 0 1 1639 8 0.104986701094497 5.5 0.061244048178196 0.0569396317005157 [0.799998592215244 0.800000033492234 0.800000044149476] [0.799998591646726 0.800000028098832 0.800000046518282] 0.799999556619276 0 [18.9629993438721 262.798950195312 721.717224121094 915.073181152344] [0.020722933113575 0.28718900680542 0.78869891166687 1] T1 [57.2797656549519 112.147288407557 94.3346655800609 52.6253297845971] [0.0639204531908035 0.125148996710777 0.105271279811859 0.0587264075875282] 197.447647094727 0.215772524476051 0.150123402476311 1.08138883113861 [1.59999718443049 1.60000006698447 1.60000008829895] 1.59999911323855 0.5 [8.62400054931641 8.62400054931641 8.62400054931641 8.62400054931641] [8.624 8.624 8.624 8.624] 0.5 4.84674549102783 2.48612403869629 3.14183735847473 1.30612244897959 1.02624667527362 1.275 1.2248809337616 1.13879263401031 2.28806624157606 voxel dimensions RMS error of voxel size brain next to the image boundary mean within the tissue classes standard deviation within the tissue classes contrast between tissue classes contrast between tissue classes noise to contrast ratio inhomogeneity to contrast ratio average Euler number (characteristic) average area of topological defects average number of defects RMSE of the expected boundary intensity Ym of the IS, OS, and CS RMSE of the expected boundary position Ypp of the IS, OS, and CS Percentual area of self-intersections of the IS and OS. total intracranial volume (GM+WM+VT) relative tissue volume (CSF,GM,WM) relative WMH volume total surface area 1639 LINUX 7771 9.3 12.8.1 1980 /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/cat_vol_qa.m /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/cat_stat_marks.m cat12 20220711-105551 1639 1639 8 0.104986701094497 5.5 0.061244048178196 0.0569396317005157 8 0.104986701094497 [295.00708552113 606.901784236704 503.030371024021 0 0] 1.30000799736746 0.000925312611130432 1779.66662770692 1404.93924078185 [0.209978536407708 0.43197724614693 0.358044217445362 0 0] [2.49158794908852 0.648407487670613] [2.51325583457947 0.824336878378341 1] [1.79777595897217 0.294241127786803 0.258318450336585;2.50185632224765 0.190134407850611 0.45092732518203;3.17972266965391 0.298466365089723 0.290754224481385] [0.72097936180798 0.28562371515781 0.570743904980204;4.19048739116169 0.340737045486131 0.429256095019796] 1.00058121491506 [1.6210225647936 5.60806835752389 4.28024815814228 0.5 0.5] 1.09253126111304 8.57446337089878 4.64901384973284 [0.163900190304487 1 1 8547.94917948099 0.445283272737266] [false] [0.0251209326088428 0.0178751517087221 0.310957551002502] [false] [715.690611933559 481.60906361548 397.753429801655 1078.04192299981 2258.38225527792 5879.48434790513] [627.32179800477 453.935975570917 284.345584738835 1570.83310620021 2069.46679197388 5217.71008517388] [325.028106689453 742.615783691406 963.019714355469] [0 0 20.9664611816406 325.028106689453 742.615783691406 963.019714355469 1282.01550292969 2470.02465820312] [0 0.02 0.05 1 2 3 4 5] 16 1.5 3 0.5 [1 1 1 1 1] 0.015 [0.03 0.03 0.03 0.03 0.03;0.03 0.03 0.03 0.03 0.03;0.03 0.03 0.03 0.03 0.03;0.03 0.03 0.03 0.03 0.03;0.03 0.03 0.03 0.03 0.03] 15 0 2 1 Shooting_Template_0_GS_tr1.5_rr3.0-3.0_or1.5_regstr15.0 [0.0247436575591564 0.0924890860915184 0.102900318801403 0 0] [0.0870901583289566 0 0.0870901583289566 0;0.187929828913987 0.0130659014093919 0.200995730323379 2786.27734375;0.187929828913987 0.0130659014093919 0.200995730323379 2786.27734375] [0.0523802451789379 0.117075808346272 0.129228740930557] [0.0370582677423954 0.0504202954471111 0.0613768734037876] 0.129228740930557

0.102900318801403

64 1.5 1.5 0.25 [1.66666666666667 1.5 1.33333333333333 1.16666666666667 1] 0.051 [0.0501 0.0501 0.0501 0.0501 0.0501;0.0501 0.0501 0.0501 0.0501 0.0501;0.0501 0.0501 0.0501 0.0501 0.0501;0.0501 0.0501 0.0501 0.0501 0.0501;0.0501 0.0501 0.0501 0.0501 0.0501] 0.5 0 2 1 Shooting_Template_0_GS_tr1.5_rr2.5-1.5_or1.5_regstr0.5 [0.0126456925645471 0.048160046339035 0.0690376162528992 0.077890932559967 0.0830915719270706 0.0947043597698212] [0.0870659925029023 0 0.0870659925029023 0;0.216182677045177 0.0188254235347985 0.235008100579976 9636.263671875;0.185677157147581 0.0209646358543417 0.206641793001923 15088.5;0.163492229928998 0.0211914729075781 0.184683702836576 22850.171875;0.146508184025751 0.0228553338720087 0.16936351789776 39982.046875;0.146508184025751 0.0228553338720087 0.16936351789776 39982.046875] [0.0145308393985033 0.0539001561701298 0.0798868909478188 0.109133161604404 0.132780954241753 0.14026315510273] [0.00387857062742114 0.0153839569538832 0.0319764502346516 0.052620317786932 0.0707783102989197 0.0757923796772957] 0.14026315510273

0.0947043597698212

------------------------------------------------------------------------ CAT12.8.1 r1980: 1/1: ./ds/sub-f5416zj/sub-f5416zj_ses-wave1bas_T1w.n ------------------------------------------------------------------------ SANLM denoising (medium): 166s APP: Rough bias correction: Initialize 14s Estimate background 13s Initial correction 16s Refine background 7s Final correction 13s Final scaling 15s 93s Correct center-of-mass 6s Affine registration 20s SPM preprocessing 1 (estimate 1 - TPM registration): 164s SPM preprocessing 1 (estimate 2): 63s SPM preprocessing 2 (write): Write Segmentation 34s Update Segmentation 39s Update Skull-Stripping 91s Update probability maps 18s 183s Global intensity correction: 36s SANLM denoising after intensity normalization (medium): 29s Fast Optimized Shooting registration 51s Local adaptive segmentation (LASstr=0.50): Prepare maps 10s Prepare partitions 4s Prepare segments (LASmod = 1.04) 34s Estimate local tissue thresholds (WM) 42s Estimate local tissue thresholds (GM) 60s Intensity transformation 0s SANLM denoising after LAS (medium) 59s 215s ROI segmentation (partitioning): Atlas -> subject space 15s Major structures 7s Ventricle detection 29s Blood vessel detection 25s WMH detection (WMHCstr=0.50 > WMHCstr'=0.11) 60s Manual stroke lesion detection 0s Closing of deep structures 4s Side alignment 8s Final corrections 9s 157s Blood vessel correction (BVCstr=0.50): 3s Amap using initial SPM12 segmentations (MRF filter strength 0.05): 64s AMAP peaks: [CSF,GM,WM] = [0.36 0.06,0.68 0.07,0.98 0.04] Final cleanup (gcutstr=0.25): Level 1 cleanup (ROI estimation) 10s Level 1 cleanup (brain masking) 6s Level 2 cleanup (CSF correction) 3s Level 3 cleanup (CSF/WM PVE) 7s 26s Optimized Shooting registration with 2.50:-0.25:1.50 mm (regstr=0.50): Template: "/code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_0_GS.nii" 1 | 2.50 | 0.0871 0.0000 0.0871 | 32.0000 2 | 2.50 | 0.0830 0.0016 0.0846 | 29.4886 3 | 2.50 | 0.0817 0.0025 0.0842 | 26.9772 4 | 2.50 | 0.0811 0.0028 0.0840 | 24.6107 5 | 2.50 | 0.0807 0.0030 0.0837 | 22.6548 6 | 2.50 | 0.0802 0.0032 0.0834 | 20.6989 7 | 2.50 | 0.0798 0.0033 0.0831 | 18.9688 8 | 2.50 | 0.0794 0.0035 0.0828 | 17.4455 9 | 2.50 | 0.0789 0.0036 0.0825 | 15.9223 10 | 2.50 | 0.0784 0.0037 0.0822 | 14.6627 11 | 2.50 | 0.0780 0.0039 0.0818 | 13.4764 12 | 2.50 | 0.0775 0.0040 0.0814 | 12.3015 13 | 2.50 | 0.0770 0.0041 0.0811 | 11.3776 14 | 2.50 | 0.0765 0.0042 0.0807 | 10.4537 15 | 2.25 | 0.0759 0.0044 0.0803 | 9.5920 16 | 2.25 | 0.0721 0.0063 0.0783 | 8.8725 29 | 2.00 | 0.0720 0.0028 0.0748 | 3.3283 30 | 2.00 | 0.0645 0.0058 0.0703 | 3.1221 31 | 2.00 | 0.0619 0.0070 0.0689 | 2.9160 43 | 1.75 | 0.0602 0.0041 0.0642 | 1.5785 44 | 1.75 | 0.0559 0.0063 0.0622 | 1.5194 45 | 1.75 | 0.0545 0.0071 0.0616 | 1.4626 57 | 1.50 | 0.0525 0.0052 0.0578 | 1.0900 58 | 1.50 | 0.0497 0.0071 0.0568 | 1.0730 59 | 1.50 | 0.0488 0.0076 0.0565 | 1.0579 Shooting registration with 2.50:-0.25:1.50 mm takes: 199s Prepare output 20s 219s Jacobian determinant (RMS): 0.015 0.054 0.080 0.109 0.133 | 0.140263 Template Matching: 0.087 0.216 0.186 0.163 0.147 | 0.146508 Write result maps: 117s Surface and thickness estimation: lh: Thickness estimation (0.50 mm ): WM distance: 59s CSF distance: 19s PBT2x thickness: 54s 140s Create initial surface 94s Topology correction: 90s Surface refinement: 112s Reduction of surface collisions with optimization: 81s Spherical mapping with areal smoothing 96s Spherical registration 352s rh: Thickness estimation (0.50 mm ): WM distance: 52s CSF distance: 17s PBT2x thickness: 50s 126s Create initial surface 103s Topology correction: 89s Surface refinement: 89s Reduction of surface collisions with optimization: 69s Spherical mapping with areal smoothing 104s Spherical registration 326s Final surface processing results: Average thickness (FS): 2.4918 0.6483 mm Surface intensity / position RMSE: 0.0612 / 0.0569 Euler number / defect number / defect size: 8.0 / 5.5 / 0.10% Display thickness: /var/lib/condor/execute/dir_52325/ds/sub-f5416zj/surf/lh.thickness.sub-f5416zj_ses-wave1bas_T1w Display thickness: /var/lib/condor/execute/dir_52325/ds/sub-f5416zj/surf/rh.thickness.sub-f5416zj_ses-wave1bas_T1w Show surfaces in orthview: /var/lib/condor/execute/dir_52325/ds/sub-f5416zj/sub-f5416zj_ses-wave1bas_T1w.nii Surface ROI estimation: 10s Surface and thickness estimation takes: 2032s ROI estimation in native space: ROI estimation of 'cobra' atlas 19s ROI estimation of 'neuromorphometrics' atlas 68s ROI estimation of 'lpba40' atlas 19s ROI estimation of 'hammers' atlas 44s ROI estimation of 'thalamus' atlas 3s ROI estimation of 'ibsr' atlas 16s ROI estimation of 'aal3' atlas 24s ROI estimation of 'mori' atlas 34s ROI estimation of 'anatomy3' atlas 48s ROI estimation of 'julichbrain' atlas 66s ROI estimation of 'Schaefer2018_100Parcels_17Networks_order' atlas 27s ROI estimation of 'Schaefer2018_200Parcels_17Networks_order' atlas 50s ROI estimation of 'Schaefer2018_400Parcels_17Networks_order' atlas 123s ROI estimation of 'Schaefer2018_600Parcels_17Networks_order' atlas 175s Write results 177s 717s Quality check: 11s Print 'Graphics' figure to: /var/lib/condor/execute/dir_52325/ds/sub-f5416zj/report/catreport_sub-f5416zj_ses-wave1bas_T1w.pdf ------------------------------------------------------------------------ CAT preprocessing takes 76 minute(s) and 11 second(s). Image Quality Rating (IQR): 82.12% (B-) GM volume (GMV): 43.20% (606.90 / 1404.94 ml) GM thickness (GMT): 2.49 0.65 mm Segmentations are saved in /var/lib/condor/execute/dir_52325/ds/sub-f5416zj/mri Reports are saved in /var/lib/condor/execute/dir_52325/ds/sub-f5416zj/report Labels are saved in /var/lib/condor/execute/dir_52325/ds/sub-f5416zj/label ------------------------------------------------------------------------