[1.05052199932433 0.000214124070132954 0.0586494330548822 3.01592436164591;-0.0166690340605676 0.945869302271813 0.358835020941827 -25.2090719153491;-0.0654992162935541 -0.325776150084309 1.11216555486566 17.8371752424401;0 0 0 1] [1.05052199932433 0.000214124070132954 0.0586494330548822 3.01592436164591;-0.0166690340605676 0.945869302271813 0.358835020941827 -25.2090719153491;-0.0654992162935541 -0.325776150084309 1.11216555486566 17.8371752424401;0 0 0 1] [1 2 3 3 4 4 4 5 5 5 5 6 6] [770.951086499606 1009.88462094221 308.066489760646 483.973062645198 296.890641106184 74.5462877968001 153.636768872852 868.9777314472 909.560581746657 967.771523325455 581.955104666333 966.015998147063 59.7694055750666] [7511.14521770083;1888.19926428196;1958.4510712278;11906.6616481574;5318.73755261515;771.365378152282;2546.80284894374;34526.1571727662;14076.8099164807;85201.0822702194;18505.2853731549;172331.631844893;819.507452095418] -6.55241632461548 [3.01592436164591 -25.2090719153491 17.8371752424401] [0.331681279546694 0.0640302370695729 -0.00528950764920828] [1.05269391329862 1.00038420871119 1.16975532851733] [0.0052305384965503 -0.0155345944879227 -0.0227858680321038] [3.01592436164591 -25.2090719153491 17.8371752424401] [0.331681279546694 0.0640302370695729 -0.00528950764920828] [1.05269391329862 1.00038420871119 1.16975532851733] [0.0052305384965503 -0.0155345944879227 -0.0227858680321038] /var/lib/condor/execute/dir_17538/ds/sub-f3300jh sub-f3300jh_ses-wave1bas_T1w /var/lib/condor/execute/dir_17538/ds/sub-f3300jh/sub-f3300jh_ses-wave1bas_T1w.nii /var/lib/condor/execute/dir_17538/ds/sub-f3300jh/sub-f3300jh_ses-wave1bas_T1w.nii /var/lib/condor/execute/dir_17538/ds/sub-f3300jh/mri/msub-f3300jh_ses-wave1bas_T1w.nii /var/lib/condor/execute/dir_17538/ds/sub-f3300jh/mri/p0sub-f3300jh_ses-wave1bas_T1w.nii ../ds/sub-f3300jh/sub-f3300jh_ses-wave1bas_T1w /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/tpm/TPM.nii [1 1 2 3 4 2] mni [0 0.001 0.5 0.05 0.2] 0.0001 0.5 0.5 0.001 60 3 0 1 0 1.4 2 0.5 0 -Inf 0.5 0.5 0.5 2 0.5 0 1 optimal [1 0.3] ../derivatives/CAT12.8.1_1980 0 24 human 1070 1 1.5 12 Template_T1 /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_1_Dartel.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_0_GS.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_T1_masked.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/brainmask.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/T1.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/cat.nii 0.5 22 1 2 0 1 5 0 0.7 0.1 BCGWHw 2 1 1 1 0 2 10 1 1 /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/neuromorphometrics.nii 0 csf gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/lpba40.nii 0 gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/cobra.nii 0 gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/hammers.nii 0 csf gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/thalamus.nii 0 gm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/suit.nii 0 gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/ibsr.nii 0 csf gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/aal3.nii 1 gm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/mori.nii 1 gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/anatomy3.nii 1 gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/julichbrain.nii 1 gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Schaefer2018_100Parcels_17Networks_order.nii 1 gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Schaefer2018_200Parcels_17Networks_order.nii 1 gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Schaefer2018_400Parcels_17Networks_order.nii 1 gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Schaefer2018_600Parcels_17Networks_order.nii 1 gm wm [false] Desikan /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/atlases_surfaces/lh.aparc_a2009s.freesurfer.annot 0 1 Destrieux /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/atlases_surfaces/lh.aparc_DK40.freesurfer.annot 0 1 HCP /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/atlases_surfaces/lh.aparc_HCP_MMP1.freesurfer.annot 0 0 Schaefer2018_100P_17N /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/atlases_surfaces/lh.Schaefer2018_100Parcels_17Networks_order.annot 1 0 Schaefer2018_200P_17N /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/atlases_surfaces/lh.Schaefer2018_200Parcels_17Networks_order.annot 0 0 Schaefer2018_400P_17N /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/atlases_surfaces/lh.Schaefer2018_400Parcels_17Networks_order.annot 1 0 Schaefer2018_600P_17N /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/atlases_surfaces/lh.Schaefer2018_600Parcels_17Networks_order.annot 1 0 0 1 3 5 7 9 11 13 13 15 17 19 21 23 25 27 0 0 0 /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_0_GS.nii 0.5 [1 0.3] 0 pbt2x /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_1_Dartel.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_2_Dartel.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_3_Dartel.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_4_Dartel.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_5_Dartel.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_6_Dartel.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_0_GS.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_1_GS.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_2_GS.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_3_GS.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_4_GS.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_0_GS.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_1_GS.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_2_GS.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_3_GS.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_4_GS.nii 0 1 1639 8 0.217665075130327 6 0.064399391412735 0.0582683086395264 [0.800001642340198 0.8000000238683 0.800000000195987] [0.800001640892158 0.800000022216291 0.799999996278988] 0.800000555468531 0 [19.7399997711182 261.143218994141 735.237426757812 938.3759765625] [0.0210363436490297 0.278292745351791 0.783521175384521 1] T1 [12.7761632976498 118.034846266423 106.198314785908 69.426036946276] [0.0139077538624406 0.12848924100399 0.115604348480701 0.0755751356482506] 207.503662109375 0.22113062441349 0.112345807254314 1.07797241210938 [1.6000032846804 1.6000000477366 1.60000000039197] 1.60000111093706 0.5 [8.62400054931641 8.62400054931641 8.62400054931641 8.62400054931641] [8.624 8.624 8.624 8.624] 0.5 4.76637411117554 1.9438099861145 3.13336420059204 1.30612244897959 1.05441626878258 1.3 1.2879878282547 1.16536617279053 1.82560194883737 voxel dimensions RMS error of voxel size brain next to the image boundary mean within the tissue classes standard deviation within the tissue classes contrast between tissue classes contrast between tissue classes noise to contrast ratio inhomogeneity to contrast ratio average Euler number (characteristic) average area of topological defects average number of defects RMSE of the expected boundary intensity Ym of the IS, OS, and CS RMSE of the expected boundary position Ypp of the IS, OS, and CS Percentual area of self-intersections of the IS and OS. total intracranial volume (GM+WM+VT) relative tissue volume (CSF,GM,WM) relative WMH volume total surface area 1639 LINUX 7771 9.3 12.8.1 1980 /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/cat_vol_qa.m /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/cat_stat_marks.m cat12 20220711-110946 1639 1639 8 0.217665075130327 6 0.064399391412735 0.0582683086395264 8 0.217665075130327 [274.214402571987 699.103409128744 481.999811637313 0 0] 0.694986225875034 0.000477549515466563 2052.89385644481 1455.31762333804 [0.188422374727398 0.480378577100729 0.331199048171873 0 0] [2.50415535931855 0.564509870625738] [2.48765802383423 0.657735626666136 1] [1.99918223663765 0.216903621967928 0.319757307384143;2.53223206946088 0.157723013213434 0.428479684891039;3.13423189968374 0.236133402000751 0.251763007724818] [0.984295841963057 0.419203125764767 0.538249911253106;3.962892113203 0.305554868293012 0.461750088746894] 1.07255796478297 [1.2338788564547 6.47734513471137 3.7981150892937 0.5 0.5] 1.04775495154666 8.62286574409196 5.30614746810225 [0.126508213141026 1 1 8930.26320975013 0.466266271979959] [false] [0.0246964748948812 0.0211831126362085 0.305531054735184] [false] [814.12001839769 449.057538821186 412.764682866944 1014.62286892202 1904.97199075405 6259.46221512536] [726.465585162623 423.135330636877 267.205712395136 1182.84830109164 1643.44155915036 5980.56213143027] [348.591400146484 753.481201171875 1010.08538818359] [0 0 26.4899120330811 348.591400146484 753.481201171875 1010.08538818359 1340.83239746094 2944.3564453125] [0 0.02 0.05 1 2 3 4 5] 16 1.5 3 0.5 [1 1 1 1 1] 0.015 [0.03 0.03 0.03 0.03 0.03;0.03 0.03 0.03 0.03 0.03;0.03 0.03 0.03 0.03 0.03;0.03 0.03 0.03 0.03 0.03;0.03 0.03 0.03 0.03 0.03] 15 0 2 1 Shooting_Template_0_GS_tr1.5_rr3.0-3.0_or1.5_regstr15.0 [0.0255445633083582 0.0884926021099091 0.0985573902726173 0 0] [0.0906119650008441 0 0.0906119650008441 0;0.197154563729789 0.0123243721164003 0.209478935846189 2628.14770507812;0.197154563729789 0.0123243721164003 0.209478935846189 2628.14770507812] [0.0518485009670258 0.115621738135815 0.126282587647438] [0.0362673029303551 0.04841398447752 0.0587462969124317] 0.126282587647438

0.0985573902726173

64 1.5 1.5 0.25 [1.66666666666667 1.5 1.33333333333333 1.16666666666667 1] 0.051 [0.0501 0.0501 0.0501 0.0501 0.0501;0.0501 0.0501 0.0501 0.0501 0.0501;0.0501 0.0501 0.0501 0.0501 0.0501;0.0501 0.0501 0.0501 0.0501 0.0501;0.0501 0.0501 0.0501 0.0501 0.0501] 0.5 0 2 1 Shooting_Template_0_GS_tr1.5_rr2.5-1.5_or1.5_regstr0.5 [0.0129414163529873 0.051770094782114 0.0678045600652695 0.0767102688550949 0.0836074650287628 0.0949295610189438] [0.0911099223802719 0 0.0911099223802719 0;0.218863812576313 0.022672951007326 0.241536763583639 11605.716796875;0.197244283998322 0.0212761211255335 0.218520405123855 15312.6796875;0.176169211595034 0.0217059480498659 0.197875159644899 23404.916015625;0.158320890637853 0.024342350161031 0.182663240798884 42583.36328125;0.158320890637853 0.024342350161031 0.182663240798884 42583.36328125] [0.0151377860456705 0.0562881380319595 0.0823897868394852 0.107612811028957 0.130772918462753 0.13760831952095] [0.00389859825372696 0.0149646261706948 0.0306335035711527 0.0506707765161991 0.0691475868225098 0.0747102126479149] 0.13760831952095

0.0949295610189438

------------------------------------------------------------------------ CAT12.8.1 r1980: 1/1: ./ds/sub-f3300jh/sub-f3300jh_ses-wave1bas_T1w.n ------------------------------------------------------------------------ SANLM denoising (medium): 183s APP: Rough bias correction: Initialize 16s Estimate background 16s Initial correction 15s Refine background 8s Final correction 13s Final scaling 15s 98s Correct center-of-mass 5s Affine registration 19s SPM preprocessing 1 (estimate 1 - TPM registration): 175s SPM preprocessing 1 (estimate 2): 88s SPM preprocessing 2 (write): Write Segmentation 40s Update Segmentation 47s Update Skull-Stripping 101s Update probability maps 20s 208s Global intensity correction: 40s SANLM denoising after intensity normalization (medium): 37s Fast Optimized Shooting registration 62s Local adaptive segmentation (LASstr=0.50): Prepare maps 12s Prepare partitions 6s Prepare segments (LASmod = 1.00) 38s Estimate local tissue thresholds (WM) 40s Estimate local tissue thresholds (GM) 57s Intensity transformation 0s SANLM denoising after LAS (medium) 62s 222s ROI segmentation (partitioning): Atlas -> subject space 21s Major structures 9s Ventricle detection 37s Blood vessel detection 25s WMH detection (WMHCstr=0.50 > WMHCstr'=0.08) 65s Manual stroke lesion detection 0s Closing of deep structures 5s Side alignment 11s Final corrections 11s 183s Blood vessel correction (BVCstr=0.50): 4s Amap using initial SPM12 segmentations (MRF filter strength 0.05): 88s AMAP peaks: [CSF,GM,WM] = [0.36 0.07,0.68 0.07,0.98 0.05] Final cleanup (gcutstr=0.25): Level 1 cleanup (ROI estimation) 11s Level 1 cleanup (brain masking) 6s Level 2 cleanup (CSF correction) 4s Level 3 cleanup (CSF/WM PVE) 7s 29s Optimized Shooting registration with 2.50:-0.25:1.50 mm (regstr=0.50): Template: "/code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_0_GS.nii" 1 | 2.50 | 0.0911 0.0000 0.0911 | 32.0000 2 | 2.50 | 0.0860 0.0018 0.0878 | 29.4886 3 | 2.50 | 0.0844 0.0029 0.0873 | 26.9772 4 | 2.50 | 0.0837 0.0033 0.0869 | 24.6107 5 | 2.50 | 0.0831 0.0035 0.0866 | 22.6548 6 | 2.50 | 0.0826 0.0037 0.0863 | 20.6989 7 | 2.50 | 0.0821 0.0038 0.0859 | 18.9688 8 | 2.50 | 0.0815 0.0040 0.0855 | 17.4455 9 | 2.50 | 0.0810 0.0041 0.0851 | 15.9223 10 | 2.50 | 0.0805 0.0043 0.0848 | 14.6627 11 | 2.50 | 0.0800 0.0044 0.0844 | 13.4764 12 | 2.50 | 0.0794 0.0045 0.0839 | 12.3015 13 | 2.50 | 0.0789 0.0046 0.0835 | 11.3776 14 | 2.50 | 0.0784 0.0047 0.0831 | 10.4537 15 | 2.25 | 0.0787 0.0049 0.0835 | 9.5920 16 | 2.25 | 0.0746 0.0069 0.0815 | 8.8725 17 | 2.25 | 0.0730 0.0076 0.0805 | 8.1530 29 | 2.00 | 0.0742 0.0035 0.0776 | 3.3283 30 | 2.00 | 0.0679 0.0061 0.0740 | 3.1221 31 | 2.00 | 0.0657 0.0071 0.0728 | 2.9160 43 | 1.75 | 0.0648 0.0041 0.0689 | 1.5785 44 | 1.75 | 0.0603 0.0064 0.0667 | 1.5194 45 | 1.75 | 0.0587 0.0072 0.0660 | 1.4626 57 | 1.50 | 0.0571 0.0054 0.0625 | 1.0900 58 | 1.50 | 0.0539 0.0074 0.0613 | 1.0730 59 | 1.50 | 0.0528 0.0081 0.0609 | 1.0579 Shooting registration with 2.50:-0.25:1.50 mm takes: 267s Prepare output 19s 286s Jacobian determinant (RMS): 0.015 0.056 0.082 0.108 0.131 | 0.137608 Template Matching: 0.091 0.219 0.197 0.176 0.158 | 0.158321 Write result maps: 59s Surface and thickness estimation: lh: Thickness estimation (0.50 mm ): WM distance: 56s CSF distance: 24s PBT2x thickness: 66s 155s Create initial surface 116s Topology correction: 133s Surface refinement: 112s Reduction of surface collisions with optimization: 110s Spherical mapping with areal smoothing 120s Spherical registration 302s rh: Thickness estimation (0.50 mm ): WM distance: 103s CSF distance: 23s PBT2x thickness: 64s 199s Create initial surface 111s Topology correction: 131s Surface refinement: 138s Reduction of surface collisions with optimization: 101s Spherical mapping with areal smoothing 116s Spherical registration 289s Final surface processing results: Average thickness (FS): 2.5040 0.5645 mm Surface intensity / position RMSE: 0.0644 / 0.0583 Euler number / defect number / defect size: 8.0 / 6.0 / 0.22% Display thickness: /var/lib/condor/execute/dir_17538/ds/sub-f3300jh/surf/lh.thickness.sub-f3300jh_ses-wave1bas_T1w Display thickness: /var/lib/condor/execute/dir_17538/ds/sub-f3300jh/surf/rh.thickness.sub-f3300jh_ses-wave1bas_T1w Show surfaces in orthview: /var/lib/condor/execute/dir_17538/ds/sub-f3300jh/sub-f3300jh_ses-wave1bas_T1w.nii Surface ROI estimation: 10s Surface and thickness estimation takes: 2286s ROI estimation in native space: ROI estimation of 'cobra' atlas 27s ROI estimation of 'neuromorphometrics' atlas 101s ROI estimation of 'lpba40' atlas 29s ROI estimation of 'hammers' atlas 72s ROI estimation of 'thalamus' atlas 5s ROI estimation of 'ibsr' atlas 26s ROI estimation of 'aal3' atlas 43s ROI estimation of 'mori' atlas 62s ROI estimation of 'anatomy3' atlas 91s ROI estimation of 'julichbrain' atlas 120s ROI estimation of 'Schaefer2018_100Parcels_17Networks_order' atlas 45s ROI estimation of 'Schaefer2018_200Parcels_17Networks_order' atlas 59s ROI estimation of 'Schaefer2018_400Parcels_17Networks_order' atlas 201s ROI estimation of 'Schaefer2018_600Parcels_17Networks_order' atlas 284s Write results 286s 1168s Quality check: 11s Print 'Graphics' figure to: /var/lib/condor/execute/dir_17538/ds/sub-f3300jh/report/catreport_sub-f3300jh_ses-wave1bas_T1w.pdf ------------------------------------------------------------------------ CAT preprocessing takes 90 minute(s) and 51 second(s). Image Quality Rating (IQR): 86.74% (B+) GM volume (GMV): 48.04% (699.10 / 1455.32 ml) GM thickness (GMT): 2.50 0.56 mm Segmentations are saved in /var/lib/condor/execute/dir_17538/ds/sub-f3300jh/mri Reports are saved in /var/lib/condor/execute/dir_17538/ds/sub-f3300jh/report Labels are saved in /var/lib/condor/execute/dir_17538/ds/sub-f3300jh/label ------------------------------------------------------------------------