[1.00026248284172 0.0382786573371945 -0.040233147340029 -3.44172988929756;-0.0298092536246162 1.05566324092801 -0.0354835913038504 -39.3464701203925;0.0356095225387884 0.069359445439954 1.07831279357981 -34.0510993240263;0 0 0 1] [1.00026248284172 0.0382786573371945 -0.040233147340029 -3.44172988929756;-0.0298092536246162 1.05566324092801 -0.0354835913038504 -39.3464701203925;0.0356095225387884 0.069359445439954 1.07831279357981 -34.0510993240263;0 0 0 1] [1 2 3 3 4 4 4 5 5 5 5 6 6] [239.766977943967 364.680586127337 38.3319515353705 116.781912761576 86.4465627003155 23.4901176826505 48.9494296825206 219.567484550105 421.6248261864 337.85315518055 177.230836878136 44.458227927099 15.2434670455481] [2577.38490303803;245.74530817525;231.554761153766;1626.59125727013;732.83576670693;97.2110830582133;286.849638223699;4087.00948680043;2407.8099724424;9314.24432804443;3325.92157019775;396.175858434999;47.9752257983151] -5.54596519470215 [-3.44172988929756 -39.3464701203925 -34.0510993240263] [-0.0642532751910188 -0.0374227587623249 0.0274279786292575] [1.00133993442675 1.05859094683529 1.07911629584115] [0.00926518216457632 -0.000785657880667955 0.0319464659343531] [-3.44172988929756 -39.3464701203925 -34.0510993240263] [-0.0642532751910188 -0.0374227587623249 0.0274279786292575] [1.00133993442675 1.05859094683529 1.07911629584115] [0.00926518216457632 -0.000785657880667955 0.0319464659343531] /var/lib/condor/execute/dir_3318420/ds/BNU_2/sub-0025981/ses-1 sub-0025981_ses-1_run-1_T1w /var/lib/condor/execute/dir_3318420/ds/BNU_2/sub-0025981/ses-1/sub-0025981_ses-1_run-1_T1w.nii /var/lib/condor/execute/dir_3318420/ds/BNU_2/sub-0025981/ses-1/sub-0025981_ses-1_run-1_T1w.nii /var/lib/condor/execute/dir_3318420/ds/BNU_2/sub-0025981/ses-1/mri/msub-0025981_ses-1_run-1_T1w.nii /var/lib/condor/execute/dir_3318420/ds/BNU_2/sub-0025981/ses-1/mri/p0sub-0025981_ses-1_run-1_T1w.nii ..s/BNU_2/sub-0025981/ses-1/sub-0025981_ses-1_run-1_T1w /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/tpm/TPM.nii [1 1 2 3 4 2] mni [0 0.001 0.5 0.05 0.2] 0.0001 0.5 0.5 0.001 60 3 0 1 0 1.4 2 0.5 0 -Inf 0.5 0.5 0.5 2 0.5 0 1 optimal [1 0.3] ../derivatives/CAT12.8.1_2040 0 1 human 1070 1 1.5 12 Template_T1 /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_1_Dartel.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_0_GS.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_T1_masked.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/brainmask.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/T1.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/cat.nii 0.5 22 1 2 0 1 5 0 0.7 0.1 BCGWHw 2 1 1 1 0 2 10 1 1 /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/neuromorphometrics.nii 0 csf gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/lpba40.nii 0 gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/cobra.nii 0 gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/hammers.nii 0 csf gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/thalamus.nii 0 gm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/suit.nii 0 gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/ibsr.nii 0 csf gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/aal3.nii 1 gm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/mori.nii 1 gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/anatomy3.nii 1 gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/julichbrain.nii 1 gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Schaefer2018_100Parcels_17Networks_order.nii 1 gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Schaefer2018_200Parcels_17Networks_order.nii 1 gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Schaefer2018_400Parcels_17Networks_order.nii 1 gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Schaefer2018_600Parcels_17Networks_order.nii 1 gm wm [false] /var/lib/condor/execute/dir_3318420/ds/code/Tian_Subcortex_S2_7T.nii 1 gm wm csf [false] Desikan /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/atlases_surfaces/lh.aparc_a2009s.freesurfer.annot 0 1 Destrieux /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/atlases_surfaces/lh.aparc_DK40.freesurfer.annot 0 1 HCP /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/atlases_surfaces/lh.aparc_HCP_MMP1.freesurfer.annot 0 0 Schaefer2018_100P_17N /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/atlases_surfaces/lh.Schaefer2018_100Parcels_17Networks_order.annot 1 0 Schaefer2018_200P_17N /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/atlases_surfaces/lh.Schaefer2018_200Parcels_17Networks_order.annot 0 0 Schaefer2018_400P_17N /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/atlases_surfaces/lh.Schaefer2018_400Parcels_17Networks_order.annot 1 0 Schaefer2018_600P_17N /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/atlases_surfaces/lh.Schaefer2018_600Parcels_17Networks_order.annot 1 0 0 1 3 5 7 9 11 13 13 15 17 19 21 23 25 27 0 0 0 /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_0_GS.nii 0.5 [1 0.3] 0 pbt2x /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_1_Dartel.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_2_Dartel.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_3_Dartel.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_4_Dartel.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_5_Dartel.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_6_Dartel.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_0_GS.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_1_GS.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_2_GS.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_3_GS.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_4_GS.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_0_GS.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_1_GS.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_2_GS.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_3_GS.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_4_GS.nii 0 1 1639 22 0.591143373469104 14 0.0680383294820786 0.0692887678742409 [1.33000004291534 1 1] [1 1 1] 1.12084791031237 NaN [6.22100019454956 31.9750003814697 197.27099609375 352.502014160156] [0.0176481269299984 0.0907087028026581 0.559630811214447 1] T1 [2.94409088507805 34.960502074578 42.395525284526 29.1728810031423] [0.00850202795118093 0.100959919393063 0.122430987656116 0.0842462629079819] 121.146911621094 0.343677222728729 0.416103661060333 0.101333029568195 0.337487101554871 [2.66000008583069 2 2] 2.24169582062474 3.02093696594238 NaN [8.62400054931641 8.62400054931641 8.62400054931641 8.62400054931641] [8.624 8.624 8.624 8.624] 0.5 2.92817497253418 1.78571677207947 1.2968430519104 2.02040816326531 1.14778584336728 1.7 1.36076664924622 1.3857753276825 2.66693336220989 2.09461971298359 voxel dimensions RMS error of voxel size normalized gradient slope of the white matter boundary brain next to the image boundary mean within the tissue classes standard deviation within the tissue classes contrast between tissue classes contrast between tissue classes noise to contrast ratio inhomogeneity to contrast ratio average Euler number (characteristic) average area of topological defects average number of defects RMSE of the expected boundary intensity Ym of the IS, OS, and CS RMSE of the expected boundary position Ypp of the IS, OS, and CS Percentual area of self-intersections of the IS and OS. total intracranial volume (GM+WM+VT) relative tissue volume (CSF,GM,WM) relative WMH volume total surface area 1639 LINUX 7771 9.3 12.8.1 2040 /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/cat_vol_qa.m /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/cat_stat_marks.m cat12 20231031-005229 1639 1639 22 0.591143373469104 14 0.0680383294820786 0.0692887678742409 22 0.591143373469104 [235.426705882353 781.579545098039 583.900670588235 0 0] 0.781556862745098 0.000488196316859758 2295.23481927387 1600.90692156863 [0.147058334691734 0.488210485299307 0.364731180008959 0 0] [2.47020737316025 0.609914263651102] [2.46507358551025 0.687076618165247 1] [1.84845395608911 0.232464453954652 0.301393948994139;2.47612729046233 0.175870359915022 0.413680764559903;3.11135503356682 0.244378841372276 0.284925286445958] [0.948941347043753 0.307131314176909 0.483860423306366;4.0434236658986 0.402238990646607 0.516139576693634] 1.90348395459546 [0.5 6.61800440551916 4.4003444685517 0.5 0.5] 1.04881963168598 8.62398346597493 5.43739636191328 [1.19209289550781e-07 1 1 11156.84767 0.39429088464188] [false] [0.001911292783916 0.00170910463202745 0.0238091684877872] [false] [987.104133333333 485.269741176471 383.508003921569 651.884874509804 1187.00463137255 7993.68232156863] [879.449160784314 455.35568627451 213.35142745098 479.093549019608 968.524882352941 8145.39876470588] [45.6730995178223 224.518402099609 364.876892089844] [-57.6383590698242 -57.638355255127 -5.98262786865234 45.6730995178223 224.518402099609 364.876892089844 524.478759765625 710.079650878906] [0 0.02 0.05 1 2 3 4 5] 16 1.5 3 0.5 [1 1 1 1 1] 0.015 [0.03 0.03 0.03 0.03 0.03;0.03 0.03 0.03 0.03 0.03;0.03 0.03 0.03 0.03 0.03;0.03 0.03 0.03 0.03 0.03;0.03 0.03 0.03 0.03 0.03] 15 0 2 1 Shooting_Template_0_GS_tr1.5_rr3.0-3.0_or1.5_regstr15.0 [0.0193743258714676 0.0655122771859169 0.071764349937439 0 0] [0.0808627650278862 0 0.0808627650278862 0;0.193059291587729 0.00945058160898637 0.202509873196715 2015.31762695312;0.193059291587729 0.00945058160898637 0.202509873196715 2015.31762695312] [0.0429507568478584 0.0871923565864563 0.0975795835256577] [0.0310128424316645 0.0438814982771873 0.0542461723089218] 0.0975795835256577

0.071764349937439

64 1.5 1.5 0.25 [1.66666666666667 1.5 1.33333333333333 1.16666666666667 1] 0.051 [0.0501 0.0501 0.0501 0.0501 0.0501;0.0501 0.0501 0.0501 0.0501 0.0501;0.0501 0.0501 0.0501 0.0501 0.0501;0.0501 0.0501 0.0501 0.0501 0.0501;0.0501 0.0501 0.0501 0.0501 0.0501] 0.5 0 2 1 Shooting_Template_0_GS_tr1.5_rr2.5-1.5_or1.5_regstr0.5 [0.00872477702796459 0.0306539181619883 0.0437596626579762 0.0530736520886421 0.0600601695477962 0.0668239593505859] [0.0833454663681049 0 0.0833454663681049 0;0.221882295482295 0.012796636523199 0.234678932005495 6550.2783203125;0.202950950345416 0.0163095362385406 0.219260486583956 11738.1689453125;0.182885933465767 0.0190618937058553 0.201947827171623 20553.90625;0.165879631640955 0.0224711337920363 0.188350765432992 39309.9453125;0.165879631640955 0.0224711337920363 0.188350765432992 39309.9453125] [0.0103012248873711 0.0364544838666916 0.0551976449787617 0.0804964751005173 0.10500094294548 0.110965870320797] [0.00329874642193317 0.0125378156080842 0.0271914005279541 0.0472307167947292 0.0666224434971809 0.0714310854673386] 0.110965870320797

0.0668239593505859

------------------------------------------------------------------------ CAT12.8.1 r2040: 1/1: ./sub-0025981/ses-1/sub-0025981_ses-1_run-1_T1w.n ------------------------------------------------------------------------ SANLM denoising (medium): 42s Internal resampling (1.33x1.00x1.00mm > 1.00x1.00x1.00mm): 1s APP: Rough bias correction: Initialize 7s Estimate background 8s Initial correction 8s Refine background 3s Final correction 6s Final scaling 6s 45s Correct center-of-mass 5s Affine registration 12s SPM preprocessing 1 (estimate 1 - TPM registration): 93s SPM preprocessing 1 (estimate 2): 94s SPM preprocessing 2 (write): Write Segmentation 21s Update Segmentation 24s Update Skull-Stripping 53s Update probability maps 11s 109s Global intensity correction: 19s SANLM denoising after intensity normalization (medium): 34s Fast Optimized Shooting registration 42s Local adaptive segmentation (LASstr=0.50): Prepare maps 5s Prepare partitions 3s Prepare segments (LASmod = 1.09) 18s Estimate local tissue thresholds (WM) 24s Estimate local tissue thresholds (GM) 38s Intensity transformation 0s SANLM denoising after LAS (medium) 51s 143s ROI segmentation (partitioning): Atlas -> subject space 9s Major structures 5s Ventricle detection 16s Blood vessel detection 13s WMH detection (WMHCstr=0.50 > WMHCstr'=0.00) 30s Manual stroke lesion detection 0s Closing of deep structures 2s Side alignment 4s Final corrections 5s 84s Blood vessel correction (BVCstr=0.50): 2s Amap using initial SPM12 segmentations (MRF filter strength 0.06): 42s AMAP peaks: [CSF,GM,WM] = [0.36 0.05,0.68 0.08,0.99 0.04] Final cleanup (gcutstr=0.25): Level 1 cleanup (ROI estimation) 6s Level 1 cleanup (brain masking) 4s Level 2 cleanup (CSF correction) 2s Level 3 cleanup (CSF/WM PVE) 4s 15s Optimized Shooting registration with 2.50:-0.25:1.50 mm (regstr=0.50): Template: "/code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_0_GS.nii" 1 | 2.50 | 0.0833 0.0000 0.0833 | 32.0000 2 | 2.50 | 0.0808 0.0011 0.0819 | 29.4886 3 | 2.50 | 0.0800 0.0017 0.0817 | 26.9772 4 | 2.50 | 0.0796 0.0019 0.0816 | 24.6107 5 | 2.50 | 0.0794 0.0021 0.0815 | 22.6548 6 | 2.50 | 0.0791 0.0022 0.0813 | 20.6989 7 | 2.50 | 0.0789 0.0023 0.0811 | 18.9688 8 | 2.50 | 0.0786 0.0024 0.0810 | 17.4455 9 | 2.50 | 0.0783 0.0024 0.0808 | 15.9223 10 | 2.50 | 0.0781 0.0025 0.0806 | 14.6627 11 | 2.50 | 0.0778 0.0026 0.0804 | 13.4764 12 | 2.50 | 0.0775 0.0026 0.0801 | 12.3015 13 | 2.50 | 0.0772 0.0027 0.0799 | 11.3776 14 | 2.50 | 0.0769 0.0028 0.0797 | 10.4537 15 | 2.25 | 0.0768 0.0028 0.0796 | 9.5920 16 | 2.25 | 0.0740 0.0043 0.0782 | 8.8725 29 | 2.00 | 0.0761 0.0019 0.0780 | 3.3283 30 | 2.00 | 0.0698 0.0044 0.0742 | 3.1221 31 | 2.00 | 0.0677 0.0054 0.0731 | 2.9160 43 | 1.75 | 0.0670 0.0031 0.0701 | 1.5785 44 | 1.75 | 0.0625 0.0055 0.0680 | 1.5194 45 | 1.75 | 0.0610 0.0064 0.0673 | 1.4626 57 | 1.50 | 0.0598 0.0046 0.0643 | 1.0900 58 | 1.50 | 0.0564 0.0068 0.0632 | 1.0730 59 | 1.50 | 0.0553 0.0075 0.0628 | 1.0579 Shooting registration with 2.50:-0.25:1.50 mm takes: 216s Prepare output 14s 230s Jacobian determinant (RMS): 0.010 0.036 0.055 0.080 0.105 | 0.110966 Template Matching: 0.083 0.222 0.203 0.183 0.166 | 0.165880 Write result maps: 77s Surface and thickness estimation: lh: Thickness estimation (0.50 mm ): WM distance: 43s CSF distance: 22s PBT2x thickness: 67s 141s Create initial surface 125s Topology correction: 134s Surface refinement: 151s Reduction of surface collisions with optimization: 106s Spherical mapping with areal smoothing 125s Spherical registration 344s rh: Thickness estimation (0.50 mm ): WM distance: 37s CSF distance: 21s PBT2x thickness: 66s 133s Create initial surface 120s Topology correction: 139s Surface refinement: 149s Reduction of surface collisions with optimization: 105s Spherical mapping with areal smoothing 126s Spherical registration 353s Final surface processing results: Average thickness (FS): 2.4702 0.6099 mm Surface intensity / position RMSE: 0.0680 / 0.0693 Euler number / defect number / defect size: 22.0 / 14.0 / 0.59% Display thickness: /var/lib/condor/execute/dir_3318420/ds/BNU_2/sub-0025981/ses-1/surf/lh.thickness.sub-0025981_ses-1_run-1_T1w Display thickness: /var/lib/condor/execute/dir_3318420/ds/BNU_2/sub-0025981/ses-1/surf/rh.thickness.sub-0025981_ses-1_run-1_T1w Show surfaces in orthview: /var/lib/condor/execute/dir_3318420/ds/BNU_2/sub-0025981/ses-1/sub-0025981_ses-1_run-1_T1w.nii Surface ROI estimation: 15s Surface and thickness estimation takes: 2390s ROI estimation in native space: ROI estimation of 'cobra' atlas 14s ROI estimation of 'neuromorphometrics' atlas 47s ROI estimation of 'lpba40' atlas 13s ROI estimation of 'hammers' atlas 32s ROI estimation of 'thalamus' atlas 3s ROI estimation of 'ibsr' atlas 12s ROI estimation of 'aal3' atlas 19s ROI estimation of 'mori' atlas 30s ROI estimation of 'anatomy3' atlas 49s ROI estimation of 'julichbrain' atlas 64s ROI estimation of 'Schaefer2018_100Parcels_17Networks_order' atlas 23s ROI estimation of 'Schaefer2018_200Parcels_17Networks_order' atlas 42s ROI estimation of 'Schaefer2018_400Parcels_17Networks_order' atlas 88s ROI estimation of 'Schaefer2018_600Parcels_17Networks_order' atlas 111s ROI estimation of 'Tian_Subcortex_S2_7T' atlas 8s Write results 10s 556s Quality check: 15s Print 'Graphics' figure to: /var/lib/condor/execute/dir_3318420/ds/BNU_2/sub-0025981/ses-1/report/catreport_sub-0025981_ses-1_run-1_T1w.pdf ------------------------------------------------------------------------ CAT preprocessing takes 69 minute(s) and 18 second(s). Image Quality Rating (IQR): 84.05% (B) GM volume (GMV): 48.82% (781.58 / 1600.91 ml) GM thickness (GMT): 2.47 0.61 mm Segmentations are saved in /var/lib/condor/execute/dir_3318420/ds/BNU_2/sub-0025981/ses-1/mri Reports are saved in /var/lib/condor/execute/dir_3318420/ds/BNU_2/sub-0025981/ses-1/report Labels are saved in /var/lib/condor/execute/dir_3318420/ds/BNU_2/sub-0025981/ses-1/label ------------------------------------------------------------------------