[1.05672094620237 -0.0621838205450043 -0.00646024152628704 0.705380901656516;0.085712896376575 1.11321846593419 -0.000688239631276677 -35.8775513992801;0.0105390551049898 0.0323236213343901 1.14325524321679 -21.7539570864071;0 0 0 1] [1.05672094620237 -0.0621838205450043 -0.00646024152628704 0.705380901656516;0.085712896376575 1.11321846593419 -0.000688239631276677 -35.8775513992801;0.0105390551049898 0.0323236213343901 1.14325524321679 -21.7539570864071;0 0 0 1] [1 2 3 3 4 4 4 5 5 5 5 6 6] [214.040967332197 328.640612525877 41.1778587978953 111.691818085279 79.5233996171936 25.4800810749218 52.1786757003416 134.447195101411 399.957707472662 271.95862451475 202.702518518406 48.3643504805965 14.7326773132098] [1934.66319548625;212.600439043442;278.439806206229;1209.95202613769;591.788916285758;121.160052200908;301.540619256637;1299.6284846518;2203.6288451953;2860.32189125025;629.923987890453;600.353433168172;40.4490114754914] -5.43631982803345 [0.705380901656516 -35.8775513992801 -21.7539570864071] [-0.0294512981912306 -0.00758037417168452 -0.0811894476534897] [1.06024380707015 1.11506226891391 1.14279586539027] [0.0267293312140022 0.00459308664161892 0.0293170037232286] [0.705380901656516 -35.8775513992801 -21.7539570864071] [-0.0294512981912306 -0.00758037417168452 -0.0811894476534897] [1.06024380707015 1.11506226891391 1.14279586539027] [0.0267293312140022 0.00459308664161892 0.0293170037232286] /var/lib/condor/execute/dir_2997985/ds/BNU_2/sub-0025978/ses-1 sub-0025978_ses-1_run-1_T1w /var/lib/condor/execute/dir_2997985/ds/BNU_2/sub-0025978/ses-1/sub-0025978_ses-1_run-1_T1w.nii /var/lib/condor/execute/dir_2997985/ds/BNU_2/sub-0025978/ses-1/sub-0025978_ses-1_run-1_T1w.nii /var/lib/condor/execute/dir_2997985/ds/BNU_2/sub-0025978/ses-1/mri/msub-0025978_ses-1_run-1_T1w.nii /var/lib/condor/execute/dir_2997985/ds/BNU_2/sub-0025978/ses-1/mri/p0sub-0025978_ses-1_run-1_T1w.nii ..s/BNU_2/sub-0025978/ses-1/sub-0025978_ses-1_run-1_T1w /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/tpm/TPM.nii [1 1 2 3 4 2] mni [0 0.001 0.5 0.05 0.2] 0.0001 0.5 0.5 0.001 60 3 0 1 0 1.4 2 0.5 0 -Inf 0.5 0.5 0.5 2 0.5 0 1 optimal [1 0.3] ../derivatives/CAT12.8.1_2040 0 1 human 1070 1 1.5 12 Template_T1 /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_1_Dartel.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_0_GS.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_T1_masked.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/brainmask.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/T1.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/cat.nii 0.5 22 1 2 0 1 5 0 0.7 0.1 BCGWHw 2 1 1 1 0 2 10 1 1 /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/neuromorphometrics.nii 0 csf gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/lpba40.nii 0 gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/cobra.nii 0 gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/hammers.nii 0 csf gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/thalamus.nii 0 gm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/suit.nii 0 gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/ibsr.nii 0 csf gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/aal3.nii 1 gm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/mori.nii 1 gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/anatomy3.nii 1 gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/julichbrain.nii 1 gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Schaefer2018_100Parcels_17Networks_order.nii 1 gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Schaefer2018_200Parcels_17Networks_order.nii 1 gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Schaefer2018_400Parcels_17Networks_order.nii 1 gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Schaefer2018_600Parcels_17Networks_order.nii 1 gm wm [false] /var/lib/condor/execute/dir_2997985/ds/code/Tian_Subcortex_S2_7T.nii 1 gm wm csf [false] Desikan /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/atlases_surfaces/lh.aparc_a2009s.freesurfer.annot 0 1 Destrieux /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/atlases_surfaces/lh.aparc_DK40.freesurfer.annot 0 1 HCP /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/atlases_surfaces/lh.aparc_HCP_MMP1.freesurfer.annot 0 0 Schaefer2018_100P_17N /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/atlases_surfaces/lh.Schaefer2018_100Parcels_17Networks_order.annot 1 0 Schaefer2018_200P_17N /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/atlases_surfaces/lh.Schaefer2018_200Parcels_17Networks_order.annot 0 0 Schaefer2018_400P_17N /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/atlases_surfaces/lh.Schaefer2018_400Parcels_17Networks_order.annot 1 0 Schaefer2018_600P_17N /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/atlases_surfaces/lh.Schaefer2018_600Parcels_17Networks_order.annot 1 0 0 1 3 5 7 9 11 13 13 15 17 19 21 23 25 27 0 0 0 /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_0_GS.nii 0.5 [1 0.3] 0 pbt2x /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_1_Dartel.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_2_Dartel.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_3_Dartel.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_4_Dartel.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_5_Dartel.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_6_Dartel.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_0_GS.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_1_GS.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_2_GS.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_3_GS.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_4_GS.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_0_GS.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_1_GS.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_2_GS.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_3_GS.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_4_GS.nii 0 1 1639 16 0.640772475826192 11.5 0.0684996098279953 0.0703496709465981 [1.33000004291534 1 1] [1 1 1] 1.12084791031237 NaN [5.41599988937378 30.6650009155273 177.595001220703 317.81298828125] [0.0170414689928293 0.0964875668287277 0.558803498744965 1] T1 [2.76791375828052 31.4959394780536 37.5431495922958 26.4391215100552] [0.00886024441570044 0.100820235908031 0.120177686214447 0.084633082151413] 109.189178466797 0.343564242124557 0.415212869644165 0.151715636253357 0.34941291809082 [2.66000008583069 2 2] 2.24169582062474 3.01639223098755 NaN [8.62400054931641 8.62400054931641 8.62400054931641 8.62400054931641] [8.624 8.624 8.624 8.624] 0.5 2.92986965179443 2.50898122787476 1.32642090320587 1.71428571428571 1.16019311895655 1.575 1.36999225616455 1.40699338912964 2.72275660307828 2.40088153129085 voxel dimensions RMS error of voxel size normalized gradient slope of the white matter boundary brain next to the image boundary mean within the tissue classes standard deviation within the tissue classes contrast between tissue classes contrast between tissue classes noise to contrast ratio inhomogeneity to contrast ratio average Euler number (characteristic) average area of topological defects average number of defects RMSE of the expected boundary intensity Ym of the IS, OS, and CS RMSE of the expected boundary position Ypp of the IS, OS, and CS Percentual area of self-intersections of the IS and OS. total intracranial volume (GM+WM+VT) relative tissue volume (CSF,GM,WM) relative WMH volume total surface area 1639 LINUX 7771 9.3 12.8.1 2040 /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/cat_vol_qa.m /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/cat_stat_marks.m cat12 20231031-010450 1639 1639 16 0.640772475826192 11.5 0.0684996098279953 0.0703496709465981 16 0.640772475826192 [180.929066666667 673.050901960784 472.436129411765 0 0] 0.548027450980392 0.000413164052962353 1855.57146681018 1326.41609803922 [0.13640445628949 0.50742063742722 0.35617490628329 0 0] [2.54985082194539 0.627725447503299] [2.53649139404297 0.742542840658241 1] [1.960231380301 0.239215413257032 0.311209095692601;2.56964305608572 0.178851378949775 0.408573502867381;3.22969814755916 0.266516448177082 0.280217401440018] [0.917804889815156 0.336336939404371 0.5349017329848;4.16132593015945 0.344083097585189 0.4650982670152] 1.1279173508673 [0.5 6.96301432160955 4.24667575939817 0.5 0.5] 1.04131640529624 8.6047248756219 5.70762510260023 [0 1 0 11156.849 0.409575023145769] [false] [0.00197940459474921 0.00170558248646557 0.0259159710258245] [false] [830.310270588235 394.77477254902 285.059949019608 612.242749019608 932.020596078431 8514.35221568627] [742.792337254902 371.945976470588 157.77368627451 450.229019607843 811.149941176471 8607.2716627451] [44.6945991516113 200.922103881836 328.856811523438] [-51.4443397521973 -51.4443359375 -3.37486839294434 44.6945991516113 200.922103881836 328.856811523438 470.937927246094 632.143005371094] [0 0.02 0.05 1 2 3 4 5] 16 1.5 3 0.5 [1 1 1 1 1] 0.015 [0.03 0.03 0.03 0.03 0.03;0.03 0.03 0.03 0.03 0.03;0.03 0.03 0.03 0.03 0.03;0.03 0.03 0.03 0.03 0.03;0.03 0.03 0.03 0.03 0.03] 15 0 2 1 Shooting_Template_0_GS_tr1.5_rr3.0-3.0_or1.5_regstr15.0 [0.0205197036266327 0.0727338492870331 0.0801205486059189 0 0] [0.0801764858775541 0 0.0801764858775541 0;0.186685349188504 0.00930075914490552 0.195986108333409 1983.36828613281;0.186685349188504 0.00930075914490552 0.195986108333409 1983.36828613281] [0.0451177433133125 0.0965077206492424 0.106325395405293] [0.032190028578043 0.0422707796096802 0.0517642125487328] 0.106325395405293

0.0801205486059189

64 1.5 1.5 0.25 [1.66666666666667 1.5 1.33333333333333 1.16666666666667 1] 0.051 [0.0501 0.0501 0.0501 0.0501 0.0501;0.0501 0.0501 0.0501 0.0501 0.0501;0.0501 0.0501 0.0501 0.0501 0.0501;0.0501 0.0501 0.0501 0.0501 0.0501;0.0501 0.0501 0.0501 0.0501 0.0501] 0.5 0 2 1 Shooting_Template_0_GS_tr1.5_rr2.5-1.5_or1.5_regstr0.5 [0.00949102453887463 0.0348047912120819 0.0485503934323788 0.0555432178080082 0.0599097684025764 0.0667606890201569] [0.081437169924857 0 0.081437169924857 0;0.211721611721612 0.012674803495116 0.224396415216728 6487.9150390625;0.190175636226713 0.0150945482902362 0.205270184516949 10863.7275390625;0.17144614542991 0.0166210960685245 0.188067241498435 17922.0625;0.15862073363695 0.0173235844641562 0.175944318101107 30305.064453125;0.15862073363695 0.0173235844641562 0.175944318101107 30305.064453125] [0.0112299481406808 0.041060671210289 0.0603853315114975 0.0827386900782585 0.102912619709969 0.107281982898712] [0.00319246668368578 0.0122796408832073 0.0258101243525743 0.044703334569931 0.0616708882153034 0.065757229924202] 0.107281982898712

0.0667606890201569

------------------------------------------------------------------------ CAT12.8.1 r2040: 1/1: ./sub-0025978/ses-1/sub-0025978_ses-1_run-1_T1w.n ------------------------------------------------------------------------ SANLM denoising (medium): 33s Internal resampling (1.33x1.00x1.00mm > 1.00x1.00x1.00mm): 1s APP: Rough bias correction: Initialize 6s Estimate background 5s Initial correction 5s Refine background 3s Final correction 4s Final scaling 4s 34s Correct center-of-mass 4s Affine registration 8s SPM preprocessing 1 (estimate 1 - TPM registration): 71s SPM preprocessing 1 (estimate 2): 57s SPM preprocessing 2 (write): Write Segmentation 15s Update Segmentation 16s Update Skull-Stripping 38s Update probability maps 8s 78s Global intensity correction: 15s SANLM denoising after intensity normalization (medium): 23s Fast Optimized Shooting registration 32s Local adaptive segmentation (LASstr=0.50): Prepare maps 3s Prepare partitions 2s Prepare segments (LASmod = 1.00) 12s Estimate local tissue thresholds (WM) 17s Estimate local tissue thresholds (GM) 25s Intensity transformation 0s SANLM denoising after LAS (medium) 38s 101s ROI segmentation (partitioning): Atlas -> subject space 7s Major structures 3s Ventricle detection 14s Blood vessel detection 8s WMH detection (WMHCstr=0.50 > WMHCstr'=0.00) 21s Manual stroke lesion detection 0s Closing of deep structures 1s Side alignment 3s Final corrections 4s 62s Blood vessel correction (BVCstr=0.50): 2s Amap using initial SPM12 segmentations (MRF filter strength 0.06): 30s AMAP peaks: [CSF,GM,WM] = [0.36 0.05,0.67 0.08,0.98 0.05] Final cleanup (gcutstr=0.25): Level 1 cleanup (ROI estimation) 4s Level 1 cleanup (brain masking) 3s Level 2 cleanup (CSF correction) 1s Level 3 cleanup (CSF/WM PVE) 3s 11s Optimized Shooting registration with 2.50:-0.25:1.50 mm (regstr=0.50): Template: "/code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_0_GS.nii" 1 | 2.50 | 0.0814 0.0000 0.0814 | 32.0000 2 | 2.50 | 0.0791 0.0011 0.0802 | 29.4886 3 | 2.50 | 0.0784 0.0017 0.0801 | 26.9772 4 | 2.50 | 0.0780 0.0019 0.0799 | 24.6107 5 | 2.50 | 0.0778 0.0020 0.0798 | 22.6548 6 | 2.50 | 0.0775 0.0021 0.0796 | 20.6989 7 | 2.50 | 0.0772 0.0022 0.0795 | 18.9688 8 | 2.50 | 0.0770 0.0023 0.0793 | 17.4455 9 | 2.50 | 0.0767 0.0024 0.0791 | 15.9223 10 | 2.50 | 0.0764 0.0025 0.0789 | 14.6627 11 | 2.50 | 0.0761 0.0026 0.0787 | 13.4764 12 | 2.50 | 0.0758 0.0026 0.0785 | 12.3015 13 | 2.50 | 0.0755 0.0027 0.0782 | 11.3776 14 | 2.50 | 0.0752 0.0028 0.0780 | 10.4537 15 | 2.25 | 0.0732 0.0029 0.0761 | 9.5920 16 | 2.25 | 0.0706 0.0042 0.0748 | 8.8725 29 | 2.00 | 0.0709 0.0019 0.0728 | 3.3283 30 | 2.00 | 0.0653 0.0041 0.0694 | 3.1221 31 | 2.00 | 0.0634 0.0050 0.0684 | 2.9160 43 | 1.75 | 0.0621 0.0029 0.0650 | 1.5785 44 | 1.75 | 0.0584 0.0049 0.0632 | 1.5194 45 | 1.75 | 0.0571 0.0055 0.0627 | 1.4626 57 | 1.50 | 0.0556 0.0040 0.0596 | 1.0900 58 | 1.50 | 0.0529 0.0058 0.0586 | 1.0730 Shooting registration with 2.50:-0.25:1.50 mm takes: 147s Prepare output 10s 157s Jacobian determinant (RMS): 0.011 0.041 0.060 0.083 0.103 | 0.107282 Template Matching: 0.081 0.212 0.190 0.171 0.159 | 0.158621 Write result maps: 55s Surface and thickness estimation: lh: Thickness estimation (0.50 mm ): WM distance: 25s CSF distance: 14s PBT2x thickness: 42s 88s Create initial surface 83s Topology correction: 94s Surface refinement: 79s Reduction of surface collisions with optimization: 66s Spherical mapping with areal smoothing 87s Spherical registration 299s rh: Thickness estimation (0.50 mm ): WM distance: 24s CSF distance: 13s PBT2x thickness: 41s 85s Create initial surface 81s Topology correction: 88s Surface refinement: 94s Reduction of surface collisions with optimization: 65s Spherical mapping with areal smoothing 77s Spherical registration 299s Final surface processing results: Average thickness (FS): 2.5498 0.6277 mm Surface intensity / position RMSE: 0.0685 / 0.0703 Euler number / defect number / defect size: 16.0 / 11.5 / 0.64% Display thickness: /var/lib/condor/execute/dir_2997985/ds/BNU_2/sub-0025978/ses-1/surf/lh.thickness.sub-0025978_ses-1_run-1_T1w Display thickness: /var/lib/condor/execute/dir_2997985/ds/BNU_2/sub-0025978/ses-1/surf/rh.thickness.sub-0025978_ses-1_run-1_T1w Show surfaces in orthview: /var/lib/condor/execute/dir_2997985/ds/BNU_2/sub-0025978/ses-1/sub-0025978_ses-1_run-1_T1w.nii Surface ROI estimation: 8s Surface and thickness estimation takes: 1678s ROI estimation in native space: ROI estimation of 'cobra' atlas 8s ROI estimation of 'neuromorphometrics' atlas 29s ROI estimation of 'lpba40' atlas 8s ROI estimation of 'hammers' atlas 20s ROI estimation of 'thalamus' atlas 2s ROI estimation of 'ibsr' atlas 7s ROI estimation of 'aal3' atlas 12s ROI estimation of 'mori' atlas 17s ROI estimation of 'anatomy3' atlas 25s ROI estimation of 'julichbrain' atlas 33s ROI estimation of 'Schaefer2018_100Parcels_17Networks_order' atlas 13s ROI estimation of 'Schaefer2018_200Parcels_17Networks_order' atlas 23s ROI estimation of 'Schaefer2018_400Parcels_17Networks_order' atlas 52s ROI estimation of 'Schaefer2018_600Parcels_17Networks_order' atlas 78s ROI estimation of 'Tian_Subcortex_S2_7T' atlas 7s Write results 8s 335s Quality check: 10s Print 'Graphics' figure to: /var/lib/condor/execute/dir_2997985/ds/BNU_2/sub-0025978/ses-1/report/catreport_sub-0025978_ses-1_run-1_T1w.pdf ------------------------------------------------------------------------ CAT preprocessing takes 47 minute(s) and 46 second(s). Image Quality Rating (IQR): 80.99% (B-) GM volume (GMV): 50.74% (673.05 / 1326.42 ml) GM thickness (GMT): 2.55 0.63 mm Segmentations are saved in /var/lib/condor/execute/dir_2997985/ds/BNU_2/sub-0025978/ses-1/mri Reports are saved in /var/lib/condor/execute/dir_2997985/ds/BNU_2/sub-0025978/ses-1/report Labels are saved in /var/lib/condor/execute/dir_2997985/ds/BNU_2/sub-0025978/ses-1/label ------------------------------------------------------------------------