[0.997719876215235 -0.0230142013062291 -0.0046603712389558 13.3186412672098;0.0571502913473181 1.00990912737342 0.225245993737046 -31.2982652987715;-0.00632242458731049 -0.214412358693156 1.05759377184078 -1.53845535224761;0 0 0 1] [0.997719876215235 -0.0230142013062291 -0.0046603712389558 13.3186412672098;0.0571502913473181 1.00990912737342 0.225245993737046 -31.2982652987715;-0.00632242458731049 -0.214412358693156 1.05759377184078 -1.53845535224761;0 0 0 1] [1 2 3 3 4 4 4 5 5 5 5 6 6] [244.134553011226 371.138203406835 45.8199799805701 133.235960011333 116.00572492616 27.8876486017796 64.8870804955589 225.132393277961 336.623656713853 239.96528482068 164.051553433317 43.0576068646263 15.6307249795013] [2528.67907315915;244.130658527587;338.52168593042;1965.01743012319;1311.14128504672;128.233265317312;505.353618367264;4161.66251475355;14230.8272445426;643.572118064686;1883.54527840158;363.681584186701;43.8723385851436] -5.4279408454895 [13.3186412672098 -31.2982652987715 -1.53845535224761] [0.209075382052152 -0.00569002765407703 -0.0572850869896876] [0.999375345027428 1.03204319733605 1.08132286782615] [0.0361556362419117 0.00153849373998687 0.000721527834835305] [13.3186412672098 -31.2982652987715 -1.53845535224761] [0.209075382052152 -0.00569002765407703 -0.0572850869896876] [0.999375345027428 1.03204319733605 1.08132286782615] [0.0361556362419117 0.00153849373998687 0.000721527834835305] /var/lib/condor/execute/dir_3318795/ds/BNU_2/sub-0025935/ses-1 sub-0025935_ses-1_run-1_T1w /var/lib/condor/execute/dir_3318795/ds/BNU_2/sub-0025935/ses-1/sub-0025935_ses-1_run-1_T1w.nii /var/lib/condor/execute/dir_3318795/ds/BNU_2/sub-0025935/ses-1/sub-0025935_ses-1_run-1_T1w.nii /var/lib/condor/execute/dir_3318795/ds/BNU_2/sub-0025935/ses-1/mri/msub-0025935_ses-1_run-1_T1w.nii /var/lib/condor/execute/dir_3318795/ds/BNU_2/sub-0025935/ses-1/mri/p0sub-0025935_ses-1_run-1_T1w.nii ..s/BNU_2/sub-0025935/ses-1/sub-0025935_ses-1_run-1_T1w /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/tpm/TPM.nii [1 1 2 3 4 2] mni [0 0.001 0.5 0.05 0.2] 0.0001 0.5 0.5 0.001 60 3 0 1 0 1.4 2 0.5 0 -Inf 0.5 0.5 0.5 2 0.5 0 1 optimal [1 0.3] ../derivatives/CAT12.8.1_2040 0 1 human 1070 1 1.5 12 Template_T1 /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_1_Dartel.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_0_GS.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_T1_masked.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/brainmask.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/T1.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/cat.nii 0.5 22 1 2 0 1 5 0 0.7 0.1 BCGWHw 2 1 1 1 0 2 10 1 1 /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/neuromorphometrics.nii 0 csf gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/lpba40.nii 0 gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/cobra.nii 0 gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/hammers.nii 0 csf gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/thalamus.nii 0 gm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/suit.nii 0 gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/ibsr.nii 0 csf gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/aal3.nii 1 gm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/mori.nii 1 gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/anatomy3.nii 1 gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/julichbrain.nii 1 gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Schaefer2018_100Parcels_17Networks_order.nii 1 gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Schaefer2018_200Parcels_17Networks_order.nii 1 gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Schaefer2018_400Parcels_17Networks_order.nii 1 gm wm [false] /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Schaefer2018_600Parcels_17Networks_order.nii 1 gm wm [false] /var/lib/condor/execute/dir_3318795/ds/code/Tian_Subcortex_S2_7T.nii 1 gm wm csf [false] Desikan /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/atlases_surfaces/lh.aparc_a2009s.freesurfer.annot 0 1 Destrieux /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/atlases_surfaces/lh.aparc_DK40.freesurfer.annot 0 1 HCP /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/atlases_surfaces/lh.aparc_HCP_MMP1.freesurfer.annot 0 0 Schaefer2018_100P_17N /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/atlases_surfaces/lh.Schaefer2018_100Parcels_17Networks_order.annot 1 0 Schaefer2018_200P_17N /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/atlases_surfaces/lh.Schaefer2018_200Parcels_17Networks_order.annot 0 0 Schaefer2018_400P_17N /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/atlases_surfaces/lh.Schaefer2018_400Parcels_17Networks_order.annot 1 0 Schaefer2018_600P_17N /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/atlases_surfaces/lh.Schaefer2018_600Parcels_17Networks_order.annot 1 0 0 1 3 5 7 9 11 13 13 15 17 19 21 23 25 27 0 0 0 /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_0_GS.nii 0.5 [1 0.3] 0 pbt2x /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_1_Dartel.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_2_Dartel.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_3_Dartel.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_4_Dartel.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_5_Dartel.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_6_Dartel.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_0_GS.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_1_GS.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_2_GS.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_3_GS.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_4_GS.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_0_GS.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_1_GS.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_2_GS.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_3_GS.nii /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_4_GS.nii 0 1 1639 40 1.43782265412183 20.5 0.071378767490387 0.0857618302106857 [1.33000004291534 1 1] [1 1 1] 1.12084791031237 NaN [5.23400020599365 33.439998626709 201.634002685547 361.183013916016] [0.014491269364953 0.092584639787674 0.558259904384613 1] T1 [3.76128313542617 38.5986454189832 43.0841496676194 28.0504596834236] [0.0105669153854251 0.108438692986965 0.121040232479572 0.0788047164678574] 124.133628845215 0.34368622303009 0.410881638526917 0.144581243395805 0.386145114898682 [2.66000008583069 2 2] 2.24169582062474 2.99429416656494 NaN [8.62400054931641 8.62400054931641 8.62400054931641 8.62400054931641] [8.624 8.624 8.624 8.624] 0.5 2.92804002761841 2.40656399726868 1.4175226688385 2.93877551020408 1.35945566353046 2.025 1.42757534980774 1.71523666381836 2.68998078063778 2.33424025997911 voxel dimensions RMS error of voxel size normalized gradient slope of the white matter boundary brain next to the image boundary mean within the tissue classes standard deviation within the tissue classes contrast between tissue classes contrast between tissue classes noise to contrast ratio inhomogeneity to contrast ratio average Euler number (characteristic) average area of topological defects average number of defects RMSE of the expected boundary intensity Ym of the IS, OS, and CS RMSE of the expected boundary position Ypp of the IS, OS, and CS Percentual area of self-intersections of the IS and OS. total intracranial volume (GM+WM+VT) relative tissue volume (CSF,GM,WM) relative WMH volume total surface area 1639 LINUX 7771 9.3 12.8.1 2040 /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/cat_vol_qa.m /code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/cat_stat_marks.m cat12 20231031-005018 1639 1639 40 1.43782265412183 20.5 0.071378767490387 0.0857618302106857 40 1.43782265412183 [177.66568627451 781.729560784314 611.90771372549 0 0] 0.790905882352941 0.000503343977636344 2188.74471928726 1571.30296078431 [0.113069020238992 0.497504033464122 0.389426946296886 0 0] [2.51385169913777 0.610119459623066] [2.52671360969543 0.73089445876712 1] [1.91171307015768 0.246611333678829 0.290614247842518;2.53833364675843 0.173338833057122 0.42279316374302;3.16098334920279 0.259418406911887 0.286592588414462] [0.882579155751555 0.350798727023088 0.559776157368153;4.08714817879931 0.358542079440069 0.440223842631847] 1.66803917126284 [0.5 6.78491439411139 4.84387475389522 0.5 0.5] 1.05033439776363 8.62388265061474 5.59394503375053 [0 1 0 11156.849 0.404270149157028] [false] [0.00205266289412975 0.00187197595369071 0.053550973534584] [false] [966.574184313725 522.270360784314 318.094988235294 713.971870588235 1094.93372156863 8141.22658431372] [841.592262745098 494.566247058824 161.70677254902 510.908760784314 904.616682352941 8228.02216470588] [49.7807998657227 228.082305908203 371.361694335938] [-39.0836601257324 -39.0836563110352 3.45922422409058 49.7807998657227 228.082305908203 371.361694335938 532.152160644531 917.403015136719] [0 0.02 0.05 1 2 3 4 5] 16 1.5 3 0.5 [1 1 1 1 1] 0.015 [0.03 0.03 0.03 0.03 0.03;0.03 0.03 0.03 0.03 0.03;0.03 0.03 0.03 0.03 0.03;0.03 0.03 0.03 0.03 0.03;0.03 0.03 0.03 0.03 0.03] 15 0 2 1 Shooting_Template_0_GS_tr1.5_rr3.0-3.0_or1.5_regstr15.0 [0.0219450257718563 0.0771495029330254 0.0845377668738365 0 0] [0.0808141371783088 0 0.0808141371783088 0;0.186417761684752 0.00953575915076724 0.195953520835519 2033.48156738281;0.186417761684752 0.00953575915076724 0.195953520835519 2033.48156738281] [0.0465607456862926 0.0979093015193939 0.107215836644173] [0.0330027490854263 0.042629785835743 0.0523813366889954] 0.107215836644173
0.0845377668738365
64 1.5 1.5 0.25 [1.66666666666667 1.5 1.33333333333333 1.16666666666667 1] 0.051 [0.0501 0.0501 0.0501 0.0501 0.0501;0.0501 0.0501 0.0501 0.0501 0.0501;0.0501 0.0501 0.0501 0.0501 0.0501;0.0501 0.0501 0.0501 0.0501 0.0501;0.0501 0.0501 0.0501 0.0501 0.0501] 0.5 0 2 1 Shooting_Template_0_GS_tr1.5_rr2.5-1.5_or1.5_regstr0.5 [0.01021858304739 0.0375361926853657 0.0511854737997055 0.0585283562541008 0.0640958398580551 0.0721796303987503] [0.0803934317989593 0 0.0803934317989593 0;0.208806333943834 0.0129046798687424 0.221711013812576 6605.5830078125;0.188482597900271 0.0155457148137033 0.204028312713974 11188.4375;0.169198872130594 0.0174711975503398 0.186670069680934 18838.703125;0.153334529251672 0.0202159808333424 0.173550510085014 35364.88671875;0.153334529251672 0.0202159808333424 0.173550510085014 35364.88671875] [0.0118728643283248 0.0428812503814697 0.0626424849033356 0.086520791053772 0.109296947717667 0.11633912473917] [0.00339003186672926 0.01305309869349 0.0282304417341948 0.0483379289507866 0.0665057674050331 0.0718717202544212] 0.11633912473917
0.0721796303987503
------------------------------------------------------------------------ CAT12.8.1 r2040: 1/1: ./sub-0025935/ses-1/sub-0025935_ses-1_run-1_T1w.n ------------------------------------------------------------------------ SANLM denoising (medium): 51s Internal resampling (1.33x1.00x1.00mm > 1.00x1.00x1.00mm): 1s APP: Rough bias correction: Initialize 7s Estimate background 8s Initial correction 8s Refine background 4s Final correction 6s Final scaling 6s 47s Correct center-of-mass 5s Affine registration 12s SPM preprocessing 1 (estimate 1 - TPM registration): 94s SPM preprocessing 1 (estimate 2): 84s SPM preprocessing 2 (write): Write Segmentation 21s Update Segmentation 24s Update Skull-Stripping 51s Update probability maps 10s 107s Global intensity correction: 19s SANLM denoising after intensity normalization (medium): 34s Fast Optimized Shooting registration 42s Local adaptive segmentation (LASstr=0.50): Prepare maps 5s Prepare partitions 3s Prepare segments (LASmod = 1.00) 18s Estimate local tissue thresholds (WM) 25s Estimate local tissue thresholds (GM) 36s Intensity transformation 0s SANLM denoising after LAS (medium) 52s 143s ROI segmentation (partitioning): Atlas -> subject space 9s Major structures 4s Ventricle detection 17s Blood vessel detection 13s WMH detection (WMHCstr=0.50 > WMHCstr'=0.00) 31s Manual stroke lesion detection 0s Closing of deep structures 2s Side alignment 4s Final corrections 5s 85s Blood vessel correction (BVCstr=0.50): 2s Amap using initial SPM12 segmentations (MRF filter strength 0.06): 40s AMAP peaks: [CSF,GM,WM] = [0.36 0.05,0.68 0.08,0.99 0.04] Final cleanup (gcutstr=0.25): Level 1 cleanup (ROI estimation) 5s Level 1 cleanup (brain masking) 4s Level 2 cleanup (CSF correction) 2s Level 3 cleanup (CSF/WM PVE) 3s 14s Optimized Shooting registration with 2.50:-0.25:1.50 mm (regstr=0.50): Template: "/code/SPM/MCR_Linux/spm12_mcr/home/gaser/gaser/spm/spm12/toolbox/cat12/templates_MNI152NLin2009cAsym/Template_0_GS.nii" 1 | 2.50 | 0.0804 0.0000 0.0804 | 32.0000 2 | 2.50 | 0.0778 0.0011 0.0789 | 29.4886 3 | 2.50 | 0.0770 0.0017 0.0787 | 26.9772 4 | 2.50 | 0.0766 0.0020 0.0786 | 24.6107 5 | 2.50 | 0.0763 0.0021 0.0784 | 22.6548 6 | 2.50 | 0.0760 0.0022 0.0782 | 20.6989 7 | 2.50 | 0.0758 0.0023 0.0781 | 18.9688 8 | 2.50 | 0.0755 0.0024 0.0779 | 17.4455 9 | 2.50 | 0.0752 0.0025 0.0777 | 15.9223 10 | 2.50 | 0.0749 0.0026 0.0775 | 14.6627 11 | 2.50 | 0.0746 0.0027 0.0772 | 13.4764 12 | 2.50 | 0.0743 0.0027 0.0770 | 12.3015 13 | 2.50 | 0.0739 0.0028 0.0768 | 11.3776 14 | 2.50 | 0.0736 0.0029 0.0765 | 10.4537 15 | 2.25 | 0.0723 0.0030 0.0753 | 9.5920 16 | 2.25 | 0.0696 0.0043 0.0739 | 8.8725 29 | 2.00 | 0.0706 0.0019 0.0725 | 3.3283 30 | 2.00 | 0.0648 0.0042 0.0691 | 3.1221 31 | 2.00 | 0.0628 0.0052 0.0680 | 2.9160 43 | 1.75 | 0.0617 0.0030 0.0647 | 1.5785 44 | 1.75 | 0.0577 0.0051 0.0628 | 1.5194 45 | 1.75 | 0.0564 0.0058 0.0622 | 1.4626 57 | 1.50 | 0.0550 0.0042 0.0592 | 1.0900 58 | 1.50 | 0.0521 0.0061 0.0582 | 1.0730 59 | 1.50 | 0.0511 0.0067 0.0579 | 1.0579 Shooting registration with 2.50:-0.25:1.50 mm takes: 210s Prepare output 15s 225s Jacobian determinant (RMS): 0.012 0.043 0.063 0.087 0.109 | 0.116339 Template Matching: 0.080 0.209 0.188 0.169 0.153 | 0.153335 Write result maps: 75s Surface and thickness estimation: lh: Thickness estimation (0.50 mm ): WM distance: 43s CSF distance: 21s PBT2x thickness: 63s 135s Create initial surface 110s Topology correction: 129s Surface refinement: 140s Reduction of surface collisions with optimization: 99s Spherical mapping with areal smoothing 120s Spherical registration 332s rh: Thickness estimation (0.50 mm ): WM distance: 40s CSF distance: 21s PBT2x thickness: 63s 131s Create initial surface 109s Topology correction: 128s Surface refinement: 143s Reduction of surface collisions with optimization: 93s Spherical mapping with areal smoothing 115s Spherical registration 351s Final surface processing results: Average thickness (FS): 2.5145 0.6085 mm Surface intensity / position RMSE: 0.0714 / 0.0858 Euler number / defect number / defect size: 40.0 / 20.5 / 1.44% Display thickness: /var/lib/condor/execute/dir_3318795/ds/BNU_2/sub-0025935/ses-1/surf/lh.thickness.sub-0025935_ses-1_run-1_T1w Display thickness: /var/lib/condor/execute/dir_3318795/ds/BNU_2/sub-0025935/ses-1/surf/rh.thickness.sub-0025935_ses-1_run-1_T1w Show surfaces in orthview: /var/lib/condor/execute/dir_3318795/ds/BNU_2/sub-0025935/ses-1/sub-0025935_ses-1_run-1_T1w.nii Surface ROI estimation: 13s Surface and thickness estimation takes: 2264s ROI estimation in native space: ROI estimation of 'cobra' atlas 11s ROI estimation of 'neuromorphometrics' atlas 38s ROI estimation of 'lpba40' atlas 11s ROI estimation of 'hammers' atlas 28s ROI estimation of 'thalamus' atlas 2s ROI estimation of 'ibsr' atlas 10s ROI estimation of 'aal3' atlas 17s ROI estimation of 'mori' atlas 27s ROI estimation of 'anatomy3' atlas 42s ROI estimation of 'julichbrain' atlas 54s ROI estimation of 'Schaefer2018_100Parcels_17Networks_order' atlas 22s ROI estimation of 'Schaefer2018_200Parcels_17Networks_order' atlas 41s ROI estimation of 'Schaefer2018_400Parcels_17Networks_order' atlas 104s ROI estimation of 'Schaefer2018_600Parcels_17Networks_order' atlas 139s ROI estimation of 'Tian_Subcortex_S2_7T' atlas 10s Write results 12s 562s Quality check: 16s Print 'Graphics' figure to: /var/lib/condor/execute/dir_3318795/ds/BNU_2/sub-0025935/ses-1/report/catreport_sub-0025935_ses-1_run-1_T1w.pdf ------------------------------------------------------------------------ CAT preprocessing takes 67 minute(s) and 16 second(s). Image Quality Rating (IQR): 81.66% (B-) GM volume (GMV): 49.75% (781.73 / 1571.30 ml) GM thickness (GMT): 2.51 0.61 mm Segmentations are saved in /var/lib/condor/execute/dir_3318795/ds/BNU_2/sub-0025935/ses-1/mri Reports are saved in /var/lib/condor/execute/dir_3318795/ds/BNU_2/sub-0025935/ses-1/report Labels are saved in /var/lib/condor/execute/dir_3318795/ds/BNU_2/sub-0025935/ses-1/label ------------------------------------------------------------------------