Progress Report / Log

Started at Sat 14 Mar 2020 04:27:08 AM CET

Feat main script


/bin/cp /data/project/studyforrest_ppa/sub-20/2nd-lvl_audio-ppa-grp.fsf design.fsf

/usr/share/fsl/5.0/bin/feat_model design

mkdir .files;cp /usr/share/fsl/5.0/doc/fsl.css .files;cp -r /usr/share/fsl/5.0/doc/images .files/images

/usr/share/fsl/5.0/bin/fsl_sub -T 60 -l logs -N feat2_pre   /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-20/2nd-lvl_audio-ppa-grp.gfeat/design.fsf -D /data/project/studyforrest_ppa/sub-20/2nd-lvl_audio-ppa-grp.gfeat -gfeatprep
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/usr/share/fsl/5.0/bin/fsl_sub -T 1 -l logs -N feat5_stop -j 29643  /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-20/2nd-lvl_audio-ppa-grp.gfeat/cope13.feat/design.fsf -D /data/project/studyforrest_ppa/sub-20/2nd-lvl_audio-ppa-grp.gfeat/cope13.feat -stop
31441

/usr/share/fsl/5.0/bin/fsl_sub -T 1 -l logs -N feat5_stop -j 4509,9384,14321,19333,24326,29275,1730,6753,11672,16806,21849,26761,31441  /usr/share/fsl/5.0/bin/feat /data/project/studyforrest_ppa/sub-20/2nd-lvl_audio-ppa-grp.gfeat/cope13.feat/design.fsf -D /data/project/studyforrest_ppa/sub-20/2nd-lvl_audio-ppa-grp.gfeat -stop

Higher-level input files preparation

/usr/share/fsl/5.0/bin/featregapply /data/project/studyforrest_ppa/sub-20/run-1_audio-ppa-grp.feat

/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=example_func --out=frgrot_p3Tvdj --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=spline


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=mean_func --out=frgrot_nA4LjP --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=spline


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope1 --out=frgrot_fUoKEA --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope10 --out=frgrot_X3nDjK --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope11 --out=frgrot_933k06 --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope12 --out=frgrot_m44P4p --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope13 --out=frgrot_kavgLJ --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope2 --out=frgrot_Hax0lV --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope3 --out=frgrot_CbU2Me --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope4 --out=frgrot_EcyLWB --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope5 --out=frgrot_a6sscW --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope6 --out=frgrot_BhsDL3 --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope7 --out=frgrot_i06zJp --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope8 --out=frgrot_fbnX6J --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope9 --out=frgrot_HcZowW --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope1 --out=frgrot_s7tZmf --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope10 --out=frgrot_2owXDy --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope11 --out=frgrot_9gQquW --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope12 --out=frgrot_b9cr03 --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope13 --out=frgrot_yZATqr --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope2 --out=frgrot_nuzgiK --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope3 --out=frgrot_O2peQ3 --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope4 --out=frgrot_SnigNe --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope5 --out=frgrot_8Q7siy --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope6 --out=frgrot_XilIHV --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope7 --out=frgrot_4Hs3ef --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope8 --out=frgrot_NMsPPn --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope9 --out=frgrot_bAPEuL --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=mask --out=frgrot_Vi5W66 --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=nn


/usr/share/fsl/5.0/bin/featregapply /data/project/studyforrest_ppa/sub-20/run-2_audio-ppa-grp.feat

/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=example_func --out=frgrot_XxROfl --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=spline


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=mean_func --out=frgrot_LsAr03 --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=spline


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope1 --out=frgrot_ALqudD --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope10 --out=frgrot_bvXDuZ --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope11 --out=frgrot_NbNf2j --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope12 --out=frgrot_e1BAUu --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope13 --out=frgrot_KdbEnP --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope2 --out=frgrot_c5IFr7 --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope3 --out=frgrot_UM2XLs --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope4 --out=frgrot_KMM2WA --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope5 --out=frgrot_A4G1AU --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope6 --out=frgrot_zdRz4d --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope7 --out=frgrot_qlb1Yq --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope8 --out=frgrot_VfPlGK --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope9 --out=frgrot_RxbN03 --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope1 --out=frgrot_uevX5m --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope10 --out=frgrot_dn8qnz --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope11 --out=frgrot_c24pBR --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope12 --out=frgrot_UJFF2a --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope13 --out=frgrot_VOhkQy --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope2 --out=frgrot_LwQShG --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope3 --out=frgrot_guCLC0 --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope4 --out=frgrot_PvB1sk --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope5 --out=frgrot_ZwOSBE --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope6 --out=frgrot_W8doiQ --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope7 --out=frgrot_vWLiW9 --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope8 --out=frgrot_9xaCIs --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope9 --out=frgrot_AvWKbG --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=mask --out=frgrot_wg8KsY --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=nn


/usr/share/fsl/5.0/bin/featregapply /data/project/studyforrest_ppa/sub-20/run-3_audio-ppa-grp.feat

/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=example_func --out=frgrot_KI5Z1p --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=spline


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=mean_func --out=frgrot_vPgQPW --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=spline


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope1 --out=frgrot_wtYkvG --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope10 --out=frgrot_a9V95O --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope11 --out=frgrot_Nu6gOb --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope12 --out=frgrot_GBQN7v --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope13 --out=frgrot_xx6LHP --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope2 --out=frgrot_muHMuX --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope3 --out=frgrot_iLgbmk --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope4 --out=frgrot_A81k0C --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope5 --out=frgrot_Xkxsk0 --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope6 --out=frgrot_9hXfZb --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope7 --out=frgrot_hJCWhv --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope8 --out=frgrot_YkiJmO --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope9 --out=frgrot_gEM3sX --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope1 --out=frgrot_RmZdlj --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope10 --out=frgrot_6UQRTC --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope11 --out=frgrot_2VP3QW --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope12 --out=frgrot_l3qKm9 --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope13 --out=frgrot_wWWj6s --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope2 --out=frgrot_qUkbUL --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope3 --out=frgrot_dRHy95 --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope4 --out=frgrot_eAZrQi --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope5 --out=frgrot_NFwvvA --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope6 --out=frgrot_7aT5YY --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope7 --out=frgrot_C8ToG9 --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope8 --out=frgrot_qnFGWt --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope9 --out=frgrot_GeEEKP --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=mask --out=frgrot_7A23G8 --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=nn


/usr/share/fsl/5.0/bin/featregapply /data/project/studyforrest_ppa/sub-20/run-4_audio-ppa-grp.feat

/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=example_func --out=frgrot_Lgxrnp --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=spline


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=mean_func --out=frgrot_DXaQRc --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=spline


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope1 --out=frgrot_rTDp9K --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope10 --out=frgrot_fjRq73 --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope11 --out=frgrot_BgvYOn --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope12 --out=frgrot_ol0Qsy --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope13 --out=frgrot_l5V6gT --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope2 --out=frgrot_C19oVc --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope3 --out=frgrot_izUowo --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope4 --out=frgrot_UOr2CI --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope5 --out=frgrot_4F0aD1 --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope6 --out=frgrot_cXJhGo --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope7 --out=frgrot_H3Ixkw --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope8 --out=frgrot_lVWIGT --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope9 --out=frgrot_Qihzhe --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope1 --out=frgrot_4fROaw --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope10 --out=frgrot_u3BlCI --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope11 --out=frgrot_DrgH22 --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope12 --out=frgrot_MbQfBl --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope13 --out=frgrot_XLiq8I --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope2 --out=frgrot_jHuorU --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope3 --out=frgrot_fIvnjc --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope4 --out=frgrot_ghIfYz --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope5 --out=frgrot_P2PG6K --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope6 --out=frgrot_v6qtS5 --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope7 --out=frgrot_NJAaxo --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope8 --out=frgrot_OzrYsH --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope9 --out=frgrot_zdeElU --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=mask --out=frgrot_PAxs9f --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=nn


/usr/share/fsl/5.0/bin/featregapply /data/project/studyforrest_ppa/sub-20/run-5_audio-ppa-grp.feat

/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=example_func --out=frgrot_zVhCjF --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=spline


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=mean_func --out=frgrot_foOeRg --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=spline


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope1 --out=frgrot_ZdcblQ --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope10 --out=frgrot_9jZUCd --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope11 --out=frgrot_wzUpnx --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope12 --out=frgrot_KnXUjQ --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope13 --out=frgrot_pAtUt3 --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope2 --out=frgrot_C8qssl --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope3 --out=frgrot_9ZTiGJ --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope4 --out=frgrot_DugKX4 --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope5 --out=frgrot_oTmNKg --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope6 --out=frgrot_b2PM2z --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope7 --out=frgrot_sR8HyW --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope8 --out=frgrot_T46Eg5 --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope9 --out=frgrot_kQ7gNr --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope1 --out=frgrot_Sn54nK --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope10 --out=frgrot_aCGTt4 --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope11 --out=frgrot_llgC2f --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope12 --out=frgrot_bGDFOC --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope13 --out=frgrot_1xElnW --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope2 --out=frgrot_6FGoV7 --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope3 --out=frgrot_qxVpEs --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope4 --out=frgrot_meyisK --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope5 --out=frgrot_ek4FZ7 --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope6 --out=frgrot_0gp0Jf --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope7 --out=frgrot_mJLFfz --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope8 --out=frgrot_3Z7tUT --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope9 --out=frgrot_syZteh --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=mask --out=frgrot_ORSUEs --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=nn


/usr/share/fsl/5.0/bin/featregapply /data/project/studyforrest_ppa/sub-20/run-6_audio-ppa-grp.feat

/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=example_func --out=frgrot_YsGf4Q --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=spline


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=mean_func --out=frgrot_4Fkxyq --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=spline


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope1 --out=frgrot_zM5IZb --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope10 --out=frgrot_h46Ouv --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope11 --out=frgrot_ICQHiD --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope12 --out=frgrot_CR1zGY --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope13 --out=frgrot_V2fsRi --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope2 --out=frgrot_7RrdBt --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope3 --out=frgrot_HFT6oN --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope4 --out=frgrot_k0Iy26 --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope5 --out=frgrot_ddmUzr --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope6 --out=frgrot_mLUHwy --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope7 --out=frgrot_GqfHNW --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope8 --out=frgrot_px1ACg --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope9 --out=frgrot_dYwLdA --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope1 --out=frgrot_16AtSK --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope10 --out=frgrot_iDIvk5 --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope11 --out=frgrot_XT9gpn --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope12 --out=frgrot_zTHiMK --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope13 --out=frgrot_KQibxW --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope2 --out=frgrot_PrbuLe --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope3 --out=frgrot_yyUasy --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope4 --out=frgrot_kZPs4K --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope5 --out=frgrot_x9Mmv5 --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope6 --out=frgrot_wSKU4n --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope7 --out=frgrot_KBd54K --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope8 --out=frgrot_Lz4ZuT --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope9 --out=frgrot_cq3vxg --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=mask --out=frgrot_2YUD0B --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=nn


/usr/share/fsl/5.0/bin/featregapply /data/project/studyforrest_ppa/sub-20/run-7_audio-ppa-grp.feat

/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=example_func --out=frgrot_naLc2Q --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=spline


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=mean_func --out=frgrot_25ezbB --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=spline


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope1 --out=frgrot_E2rVYb --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope10 --out=frgrot_Ko0tZt --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope11 --out=frgrot_15DmZQ --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope12 --out=frgrot_6X2BY2 --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope13 --out=frgrot_kFOR1m --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope2 --out=frgrot_nQzzSI --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope3 --out=frgrot_jhfOY2 --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope4 --out=frgrot_6qxXbb --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope5 --out=frgrot_hCghtx --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope6 --out=frgrot_X3nf2T --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope7 --out=frgrot_WBSYj5 --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope8 --out=frgrot_i5Xm4n --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope9 --out=frgrot_HVgshI --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope1 --out=frgrot_9ZUDT5 --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope10 --out=frgrot_d0Qrtg --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope11 --out=frgrot_wm9o3z --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope12 --out=frgrot_P288SS --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope13 --out=frgrot_cjEn1e --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope2 --out=frgrot_AelKur --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope3 --out=frgrot_GMvTPK --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope4 --out=frgrot_tj2xR7 --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope5 --out=frgrot_4SFWXj --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope6 --out=frgrot_BQmDIC --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope7 --out=frgrot_JAOnZX --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope8 --out=frgrot_Z4YIgl --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope9 --out=frgrot_eYEoBw --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=mask --out=frgrot_AKkTVP --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=nn


/usr/share/fsl/5.0/bin/featregapply /data/project/studyforrest_ppa/sub-20/run-8_audio-ppa-grp.feat

/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=example_func --out=frgrot_lyMJii --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=spline


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=mean_func --out=frgrot_m0HxRV --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=spline


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope1 --out=frgrot_MQDHxx --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope10 --out=frgrot_lTE8cR --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope11 --out=frgrot_7MlSaa --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope12 --out=frgrot_IWwLQw --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope13 --out=frgrot_wHOilF --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope2 --out=frgrot_5EAROY --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope3 --out=frgrot_gsW0ko --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope4 --out=frgrot_2I0oUz --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope5 --out=frgrot_K3cTdS --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope6 --out=frgrot_qsrtFf --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope7 --out=frgrot_ITVuZx --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope8 --out=frgrot_FZmnoL --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/cope9 --out=frgrot_gBDXh7 --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope1 --out=frgrot_yWFfOp --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope10 --out=frgrot_OxAXcK --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope11 --out=frgrot_u2AdVV --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope12 --out=frgrot_ACh4Ge --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope13 --out=frgrot_9tRzNy --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope2 --out=frgrot_OPUEDJ --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope3 --out=frgrot_0Q3QN3 --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope4 --out=frgrot_yShcbo --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope5 --out=frgrot_nifmJK --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope6 --out=frgrot_xbmVfT --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope7 --out=frgrot_mp2JYf --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope8 --out=frgrot_RkEbMz --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=stats/varcope9 --out=frgrot_gc9uiQ --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=trilinear


/usr/share/fsl/5.0/bin/applywarp --ref=reg/standard --in=mask --out=frgrot_ID0hd2 --warp=reg/highres2standard_warp --premat=reg/example_func2highres.mat --interp=nn


/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-1_audio-ppa-grp.feat/reg/standard bg_image

/usr/share/fsl/5.0/bin/fslmerge -t mask  /data/project/studyforrest_ppa/sub-20/run-1_audio-ppa-grp.feat/reg_standard/mask /data/project/studyforrest_ppa/sub-20/run-2_audio-ppa-grp.feat/reg_standard/mask /data/project/studyforrest_ppa/sub-20/run-3_audio-ppa-grp.feat/reg_standard/mask /data/project/studyforrest_ppa/sub-20/run-4_audio-ppa-grp.feat/reg_standard/mask /data/project/studyforrest_ppa/sub-20/run-5_audio-ppa-grp.feat/reg_standard/mask /data/project/studyforrest_ppa/sub-20/run-6_audio-ppa-grp.feat/reg_standard/mask /data/project/studyforrest_ppa/sub-20/run-7_audio-ppa-grp.feat/reg_standard/mask /data/project/studyforrest_ppa/sub-20/run-8_audio-ppa-grp.feat/reg_standard/mask

mkdir -p inputreg

/usr/share/fsl/5.0/bin/fslmaths ../mask -mul 8 -Tmean masksum -odt short

/usr/share/fsl/5.0/bin/fslmaths masksum -thr 8 -add masksum masksum

/usr/share/fsl/5.0/bin/overlay 0 0 -c ../bg_image -a masksum 0.9 16 masksum_overlay

/usr/share/fsl/5.0/bin/slicer masksum_overlay -S 2 750 masksum_overlay.png

/usr/share/fsl/5.0/bin/fslmaths masksum -mul 0 maskunique

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-1_audio-ppa-grp.feat/reg_standard/mask -mul -1 -add 1 -mul 1 -add maskunique maskunique

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-2_audio-ppa-grp.feat/reg_standard/mask -mul -1 -add 1 -mul 2 -add maskunique maskunique

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-3_audio-ppa-grp.feat/reg_standard/mask -mul -1 -add 1 -mul 3 -add maskunique maskunique

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-4_audio-ppa-grp.feat/reg_standard/mask -mul -1 -add 1 -mul 4 -add maskunique maskunique

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-5_audio-ppa-grp.feat/reg_standard/mask -mul -1 -add 1 -mul 5 -add maskunique maskunique

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-6_audio-ppa-grp.feat/reg_standard/mask -mul -1 -add 1 -mul 6 -add maskunique maskunique

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-7_audio-ppa-grp.feat/reg_standard/mask -mul -1 -add 1 -mul 7 -add maskunique maskunique

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-8_audio-ppa-grp.feat/reg_standard/mask -mul -1 -add 1 -mul 8 -add maskunique maskunique

/usr/share/fsl/5.0/bin/fslmaths masksum -thr 7 -uthr 7 -bin -mul maskunique maskunique

/usr/share/fsl/5.0/bin/overlay 0 0 ../bg_image -a maskunique 0.9 8 maskunique_overlay

/usr/share/fsl/5.0/bin/slicer maskunique_overlay -S 2 750 maskunique_overlay.png

/bin/cp /usr/share/fsl/5.0/etc/luts/ramp.gif .ramp.gif

/usr/share/fsl/5.0/bin/fslmaths mask -Tmin mask

/usr/share/fsl/5.0/bin/fslmerge -t mean_func  /data/project/studyforrest_ppa/sub-20/run-1_audio-ppa-grp.feat/reg_standard/mean_func /data/project/studyforrest_ppa/sub-20/run-2_audio-ppa-grp.feat/reg_standard/mean_func /data/project/studyforrest_ppa/sub-20/run-3_audio-ppa-grp.feat/reg_standard/mean_func /data/project/studyforrest_ppa/sub-20/run-4_audio-ppa-grp.feat/reg_standard/mean_func /data/project/studyforrest_ppa/sub-20/run-5_audio-ppa-grp.feat/reg_standard/mean_func /data/project/studyforrest_ppa/sub-20/run-6_audio-ppa-grp.feat/reg_standard/mean_func /data/project/studyforrest_ppa/sub-20/run-7_audio-ppa-grp.feat/reg_standard/mean_func /data/project/studyforrest_ppa/sub-20/run-8_audio-ppa-grp.feat/reg_standard/mean_func

/usr/share/fsl/5.0/bin/fslmaths mean_func -Tmean mean_func

/usr/share/fsl/5.0/bin/fslmerge -t cope1  /data/project/studyforrest_ppa/sub-20/run-1_audio-ppa-grp.feat/reg_standard/stats/cope1 /data/project/studyforrest_ppa/sub-20/run-2_audio-ppa-grp.feat/reg_standard/stats/cope1 /data/project/studyforrest_ppa/sub-20/run-3_audio-ppa-grp.feat/reg_standard/stats/cope1 /data/project/studyforrest_ppa/sub-20/run-4_audio-ppa-grp.feat/reg_standard/stats/cope1 /data/project/studyforrest_ppa/sub-20/run-5_audio-ppa-grp.feat/reg_standard/stats/cope1 /data/project/studyforrest_ppa/sub-20/run-6_audio-ppa-grp.feat/reg_standard/stats/cope1 /data/project/studyforrest_ppa/sub-20/run-7_audio-ppa-grp.feat/reg_standard/stats/cope1 /data/project/studyforrest_ppa/sub-20/run-8_audio-ppa-grp.feat/reg_standard/stats/cope1

/usr/share/fsl/5.0/bin/fslmaths cope1 -mas mask cope1

printf '0.036220672499999995 ' >> design.lcon

/usr/share/fsl/5.0/bin/fslmerge -t varcope1  /data/project/studyforrest_ppa/sub-20/run-1_audio-ppa-grp.feat/reg_standard/stats/varcope1 /data/project/studyforrest_ppa/sub-20/run-2_audio-ppa-grp.feat/reg_standard/stats/varcope1 /data/project/studyforrest_ppa/sub-20/run-3_audio-ppa-grp.feat/reg_standard/stats/varcope1 /data/project/studyforrest_ppa/sub-20/run-4_audio-ppa-grp.feat/reg_standard/stats/varcope1 /data/project/studyforrest_ppa/sub-20/run-5_audio-ppa-grp.feat/reg_standard/stats/varcope1 /data/project/studyforrest_ppa/sub-20/run-6_audio-ppa-grp.feat/reg_standard/stats/varcope1 /data/project/studyforrest_ppa/sub-20/run-7_audio-ppa-grp.feat/reg_standard/stats/varcope1 /data/project/studyforrest_ppa/sub-20/run-8_audio-ppa-grp.feat/reg_standard/stats/varcope1

/usr/share/fsl/5.0/bin/fslmaths varcope1 -mas mask varcope1

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-1_audio-ppa-grp.feat/reg_standard/stats/cope1 -mul 0 -add 409   /data/project/studyforrest_ppa/sub-20/run-1_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t1

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-2_audio-ppa-grp.feat/reg_standard/stats/cope1 -mul 0 -add 399   /data/project/studyforrest_ppa/sub-20/run-2_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t1

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-3_audio-ppa-grp.feat/reg_standard/stats/cope1 -mul 0 -add 396   /data/project/studyforrest_ppa/sub-20/run-3_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t1

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-4_audio-ppa-grp.feat/reg_standard/stats/cope1 -mul 0 -add 446   /data/project/studyforrest_ppa/sub-20/run-4_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t1

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-5_audio-ppa-grp.feat/reg_standard/stats/cope1 -mul 0 -add 420   /data/project/studyforrest_ppa/sub-20/run-5_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t1

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-6_audio-ppa-grp.feat/reg_standard/stats/cope1 -mul 0 -add 397   /data/project/studyforrest_ppa/sub-20/run-6_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t1

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-7_audio-ppa-grp.feat/reg_standard/stats/cope1 -mul 0 -add 500   /data/project/studyforrest_ppa/sub-20/run-7_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t1

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-8_audio-ppa-grp.feat/reg_standard/stats/cope1 -mul 0 -add 296   /data/project/studyforrest_ppa/sub-20/run-8_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t1

/usr/share/fsl/5.0/bin/fslmerge -t tdof_t1  /data/project/studyforrest_ppa/sub-20/run-1_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t1 /data/project/studyforrest_ppa/sub-20/run-2_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t1 /data/project/studyforrest_ppa/sub-20/run-3_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t1 /data/project/studyforrest_ppa/sub-20/run-4_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t1 /data/project/studyforrest_ppa/sub-20/run-5_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t1 /data/project/studyforrest_ppa/sub-20/run-6_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t1 /data/project/studyforrest_ppa/sub-20/run-7_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t1 /data/project/studyforrest_ppa/sub-20/run-8_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t1

/usr/share/fsl/5.0/bin/fslmaths tdof_t1 -mas mask tdof_t1

/usr/share/fsl/5.0/bin/fslmerge -t cope2  /data/project/studyforrest_ppa/sub-20/run-1_audio-ppa-grp.feat/reg_standard/stats/cope2 /data/project/studyforrest_ppa/sub-20/run-2_audio-ppa-grp.feat/reg_standard/stats/cope2 /data/project/studyforrest_ppa/sub-20/run-3_audio-ppa-grp.feat/reg_standard/stats/cope2 /data/project/studyforrest_ppa/sub-20/run-4_audio-ppa-grp.feat/reg_standard/stats/cope2 /data/project/studyforrest_ppa/sub-20/run-5_audio-ppa-grp.feat/reg_standard/stats/cope2 /data/project/studyforrest_ppa/sub-20/run-6_audio-ppa-grp.feat/reg_standard/stats/cope2 /data/project/studyforrest_ppa/sub-20/run-7_audio-ppa-grp.feat/reg_standard/stats/cope2 /data/project/studyforrest_ppa/sub-20/run-8_audio-ppa-grp.feat/reg_standard/stats/cope2

/usr/share/fsl/5.0/bin/fslmaths cope2 -mas mask cope2

printf '0.03809893375 ' >> design.lcon

/usr/share/fsl/5.0/bin/fslmerge -t varcope2  /data/project/studyforrest_ppa/sub-20/run-1_audio-ppa-grp.feat/reg_standard/stats/varcope2 /data/project/studyforrest_ppa/sub-20/run-2_audio-ppa-grp.feat/reg_standard/stats/varcope2 /data/project/studyforrest_ppa/sub-20/run-3_audio-ppa-grp.feat/reg_standard/stats/varcope2 /data/project/studyforrest_ppa/sub-20/run-4_audio-ppa-grp.feat/reg_standard/stats/varcope2 /data/project/studyforrest_ppa/sub-20/run-5_audio-ppa-grp.feat/reg_standard/stats/varcope2 /data/project/studyforrest_ppa/sub-20/run-6_audio-ppa-grp.feat/reg_standard/stats/varcope2 /data/project/studyforrest_ppa/sub-20/run-7_audio-ppa-grp.feat/reg_standard/stats/varcope2 /data/project/studyforrest_ppa/sub-20/run-8_audio-ppa-grp.feat/reg_standard/stats/varcope2

/usr/share/fsl/5.0/bin/fslmaths varcope2 -mas mask varcope2

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-1_audio-ppa-grp.feat/reg_standard/stats/cope2 -mul 0 -add 409   /data/project/studyforrest_ppa/sub-20/run-1_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t2

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-2_audio-ppa-grp.feat/reg_standard/stats/cope2 -mul 0 -add 399   /data/project/studyforrest_ppa/sub-20/run-2_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t2

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-3_audio-ppa-grp.feat/reg_standard/stats/cope2 -mul 0 -add 396   /data/project/studyforrest_ppa/sub-20/run-3_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t2

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-4_audio-ppa-grp.feat/reg_standard/stats/cope2 -mul 0 -add 446   /data/project/studyforrest_ppa/sub-20/run-4_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t2

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-5_audio-ppa-grp.feat/reg_standard/stats/cope2 -mul 0 -add 420   /data/project/studyforrest_ppa/sub-20/run-5_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t2

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-6_audio-ppa-grp.feat/reg_standard/stats/cope2 -mul 0 -add 397   /data/project/studyforrest_ppa/sub-20/run-6_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t2

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-7_audio-ppa-grp.feat/reg_standard/stats/cope2 -mul 0 -add 500   /data/project/studyforrest_ppa/sub-20/run-7_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t2

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-8_audio-ppa-grp.feat/reg_standard/stats/cope2 -mul 0 -add 296   /data/project/studyforrest_ppa/sub-20/run-8_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t2

/usr/share/fsl/5.0/bin/fslmerge -t tdof_t2  /data/project/studyforrest_ppa/sub-20/run-1_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t2 /data/project/studyforrest_ppa/sub-20/run-2_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t2 /data/project/studyforrest_ppa/sub-20/run-3_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t2 /data/project/studyforrest_ppa/sub-20/run-4_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t2 /data/project/studyforrest_ppa/sub-20/run-5_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t2 /data/project/studyforrest_ppa/sub-20/run-6_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t2 /data/project/studyforrest_ppa/sub-20/run-7_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t2 /data/project/studyforrest_ppa/sub-20/run-8_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t2

/usr/share/fsl/5.0/bin/fslmaths tdof_t2 -mas mask tdof_t2

/usr/share/fsl/5.0/bin/fslmerge -t cope3  /data/project/studyforrest_ppa/sub-20/run-1_audio-ppa-grp.feat/reg_standard/stats/cope3 /data/project/studyforrest_ppa/sub-20/run-2_audio-ppa-grp.feat/reg_standard/stats/cope3 /data/project/studyforrest_ppa/sub-20/run-3_audio-ppa-grp.feat/reg_standard/stats/cope3 /data/project/studyforrest_ppa/sub-20/run-4_audio-ppa-grp.feat/reg_standard/stats/cope3 /data/project/studyforrest_ppa/sub-20/run-5_audio-ppa-grp.feat/reg_standard/stats/cope3 /data/project/studyforrest_ppa/sub-20/run-6_audio-ppa-grp.feat/reg_standard/stats/cope3 /data/project/studyforrest_ppa/sub-20/run-7_audio-ppa-grp.feat/reg_standard/stats/cope3 /data/project/studyforrest_ppa/sub-20/run-8_audio-ppa-grp.feat/reg_standard/stats/cope3

/usr/share/fsl/5.0/bin/fslmaths cope3 -mas mask cope3

printf '0.01731664 ' >> design.lcon

/usr/share/fsl/5.0/bin/fslmerge -t varcope3  /data/project/studyforrest_ppa/sub-20/run-1_audio-ppa-grp.feat/reg_standard/stats/varcope3 /data/project/studyforrest_ppa/sub-20/run-2_audio-ppa-grp.feat/reg_standard/stats/varcope3 /data/project/studyforrest_ppa/sub-20/run-3_audio-ppa-grp.feat/reg_standard/stats/varcope3 /data/project/studyforrest_ppa/sub-20/run-4_audio-ppa-grp.feat/reg_standard/stats/varcope3 /data/project/studyforrest_ppa/sub-20/run-5_audio-ppa-grp.feat/reg_standard/stats/varcope3 /data/project/studyforrest_ppa/sub-20/run-6_audio-ppa-grp.feat/reg_standard/stats/varcope3 /data/project/studyforrest_ppa/sub-20/run-7_audio-ppa-grp.feat/reg_standard/stats/varcope3 /data/project/studyforrest_ppa/sub-20/run-8_audio-ppa-grp.feat/reg_standard/stats/varcope3

/usr/share/fsl/5.0/bin/fslmaths varcope3 -mas mask varcope3

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-1_audio-ppa-grp.feat/reg_standard/stats/cope3 -mul 0 -add 409   /data/project/studyforrest_ppa/sub-20/run-1_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t3

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-2_audio-ppa-grp.feat/reg_standard/stats/cope3 -mul 0 -add 399   /data/project/studyforrest_ppa/sub-20/run-2_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t3

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-3_audio-ppa-grp.feat/reg_standard/stats/cope3 -mul 0 -add 396   /data/project/studyforrest_ppa/sub-20/run-3_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t3

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-4_audio-ppa-grp.feat/reg_standard/stats/cope3 -mul 0 -add 446   /data/project/studyforrest_ppa/sub-20/run-4_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t3

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-5_audio-ppa-grp.feat/reg_standard/stats/cope3 -mul 0 -add 420   /data/project/studyforrest_ppa/sub-20/run-5_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t3

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-6_audio-ppa-grp.feat/reg_standard/stats/cope3 -mul 0 -add 397   /data/project/studyforrest_ppa/sub-20/run-6_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t3

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-7_audio-ppa-grp.feat/reg_standard/stats/cope3 -mul 0 -add 500   /data/project/studyforrest_ppa/sub-20/run-7_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t3

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-8_audio-ppa-grp.feat/reg_standard/stats/cope3 -mul 0 -add 296   /data/project/studyforrest_ppa/sub-20/run-8_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t3

/usr/share/fsl/5.0/bin/fslmerge -t tdof_t3  /data/project/studyforrest_ppa/sub-20/run-1_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t3 /data/project/studyforrest_ppa/sub-20/run-2_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t3 /data/project/studyforrest_ppa/sub-20/run-3_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t3 /data/project/studyforrest_ppa/sub-20/run-4_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t3 /data/project/studyforrest_ppa/sub-20/run-5_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t3 /data/project/studyforrest_ppa/sub-20/run-6_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t3 /data/project/studyforrest_ppa/sub-20/run-7_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t3 /data/project/studyforrest_ppa/sub-20/run-8_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t3

/usr/share/fsl/5.0/bin/fslmaths tdof_t3 -mas mask tdof_t3

/usr/share/fsl/5.0/bin/fslmerge -t cope4  /data/project/studyforrest_ppa/sub-20/run-1_audio-ppa-grp.feat/reg_standard/stats/cope4 /data/project/studyforrest_ppa/sub-20/run-2_audio-ppa-grp.feat/reg_standard/stats/cope4 /data/project/studyforrest_ppa/sub-20/run-3_audio-ppa-grp.feat/reg_standard/stats/cope4 /data/project/studyforrest_ppa/sub-20/run-4_audio-ppa-grp.feat/reg_standard/stats/cope4 /data/project/studyforrest_ppa/sub-20/run-5_audio-ppa-grp.feat/reg_standard/stats/cope4 /data/project/studyforrest_ppa/sub-20/run-6_audio-ppa-grp.feat/reg_standard/stats/cope4 /data/project/studyforrest_ppa/sub-20/run-7_audio-ppa-grp.feat/reg_standard/stats/cope4 /data/project/studyforrest_ppa/sub-20/run-8_audio-ppa-grp.feat/reg_standard/stats/cope4

/usr/share/fsl/5.0/bin/fslmaths cope4 -mas mask cope4

printf '0.03532390625 ' >> design.lcon

/usr/share/fsl/5.0/bin/fslmerge -t varcope4  /data/project/studyforrest_ppa/sub-20/run-1_audio-ppa-grp.feat/reg_standard/stats/varcope4 /data/project/studyforrest_ppa/sub-20/run-2_audio-ppa-grp.feat/reg_standard/stats/varcope4 /data/project/studyforrest_ppa/sub-20/run-3_audio-ppa-grp.feat/reg_standard/stats/varcope4 /data/project/studyforrest_ppa/sub-20/run-4_audio-ppa-grp.feat/reg_standard/stats/varcope4 /data/project/studyforrest_ppa/sub-20/run-5_audio-ppa-grp.feat/reg_standard/stats/varcope4 /data/project/studyforrest_ppa/sub-20/run-6_audio-ppa-grp.feat/reg_standard/stats/varcope4 /data/project/studyforrest_ppa/sub-20/run-7_audio-ppa-grp.feat/reg_standard/stats/varcope4 /data/project/studyforrest_ppa/sub-20/run-8_audio-ppa-grp.feat/reg_standard/stats/varcope4

/usr/share/fsl/5.0/bin/fslmaths varcope4 -mas mask varcope4

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-1_audio-ppa-grp.feat/reg_standard/stats/cope4 -mul 0 -add 409   /data/project/studyforrest_ppa/sub-20/run-1_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t4

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-2_audio-ppa-grp.feat/reg_standard/stats/cope4 -mul 0 -add 399   /data/project/studyforrest_ppa/sub-20/run-2_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t4

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-3_audio-ppa-grp.feat/reg_standard/stats/cope4 -mul 0 -add 396   /data/project/studyforrest_ppa/sub-20/run-3_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t4

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-4_audio-ppa-grp.feat/reg_standard/stats/cope4 -mul 0 -add 446   /data/project/studyforrest_ppa/sub-20/run-4_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t4

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-5_audio-ppa-grp.feat/reg_standard/stats/cope4 -mul 0 -add 420   /data/project/studyforrest_ppa/sub-20/run-5_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t4

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-6_audio-ppa-grp.feat/reg_standard/stats/cope4 -mul 0 -add 397   /data/project/studyforrest_ppa/sub-20/run-6_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t4

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-7_audio-ppa-grp.feat/reg_standard/stats/cope4 -mul 0 -add 500   /data/project/studyforrest_ppa/sub-20/run-7_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t4

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-8_audio-ppa-grp.feat/reg_standard/stats/cope4 -mul 0 -add 296   /data/project/studyforrest_ppa/sub-20/run-8_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t4

/usr/share/fsl/5.0/bin/fslmerge -t tdof_t4  /data/project/studyforrest_ppa/sub-20/run-1_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t4 /data/project/studyforrest_ppa/sub-20/run-2_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t4 /data/project/studyforrest_ppa/sub-20/run-3_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t4 /data/project/studyforrest_ppa/sub-20/run-4_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t4 /data/project/studyforrest_ppa/sub-20/run-5_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t4 /data/project/studyforrest_ppa/sub-20/run-6_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t4 /data/project/studyforrest_ppa/sub-20/run-7_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t4 /data/project/studyforrest_ppa/sub-20/run-8_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t4

/usr/share/fsl/5.0/bin/fslmaths tdof_t4 -mas mask tdof_t4

/usr/share/fsl/5.0/bin/fslmerge -t cope5  /data/project/studyforrest_ppa/sub-20/run-1_audio-ppa-grp.feat/reg_standard/stats/cope5 /data/project/studyforrest_ppa/sub-20/run-2_audio-ppa-grp.feat/reg_standard/stats/cope5 /data/project/studyforrest_ppa/sub-20/run-3_audio-ppa-grp.feat/reg_standard/stats/cope5 /data/project/studyforrest_ppa/sub-20/run-4_audio-ppa-grp.feat/reg_standard/stats/cope5 /data/project/studyforrest_ppa/sub-20/run-5_audio-ppa-grp.feat/reg_standard/stats/cope5 /data/project/studyforrest_ppa/sub-20/run-6_audio-ppa-grp.feat/reg_standard/stats/cope5 /data/project/studyforrest_ppa/sub-20/run-7_audio-ppa-grp.feat/reg_standard/stats/cope5 /data/project/studyforrest_ppa/sub-20/run-8_audio-ppa-grp.feat/reg_standard/stats/cope5

/usr/share/fsl/5.0/bin/fslmaths cope5 -mas mask cope5

printf '0.02982784875 ' >> design.lcon

/usr/share/fsl/5.0/bin/fslmerge -t varcope5  /data/project/studyforrest_ppa/sub-20/run-1_audio-ppa-grp.feat/reg_standard/stats/varcope5 /data/project/studyforrest_ppa/sub-20/run-2_audio-ppa-grp.feat/reg_standard/stats/varcope5 /data/project/studyforrest_ppa/sub-20/run-3_audio-ppa-grp.feat/reg_standard/stats/varcope5 /data/project/studyforrest_ppa/sub-20/run-4_audio-ppa-grp.feat/reg_standard/stats/varcope5 /data/project/studyforrest_ppa/sub-20/run-5_audio-ppa-grp.feat/reg_standard/stats/varcope5 /data/project/studyforrest_ppa/sub-20/run-6_audio-ppa-grp.feat/reg_standard/stats/varcope5 /data/project/studyforrest_ppa/sub-20/run-7_audio-ppa-grp.feat/reg_standard/stats/varcope5 /data/project/studyforrest_ppa/sub-20/run-8_audio-ppa-grp.feat/reg_standard/stats/varcope5

/usr/share/fsl/5.0/bin/fslmaths varcope5 -mas mask varcope5

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-1_audio-ppa-grp.feat/reg_standard/stats/cope5 -mul 0 -add 409   /data/project/studyforrest_ppa/sub-20/run-1_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t5

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-2_audio-ppa-grp.feat/reg_standard/stats/cope5 -mul 0 -add 399   /data/project/studyforrest_ppa/sub-20/run-2_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t5

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-3_audio-ppa-grp.feat/reg_standard/stats/cope5 -mul 0 -add 396   /data/project/studyforrest_ppa/sub-20/run-3_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t5

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-4_audio-ppa-grp.feat/reg_standard/stats/cope5 -mul 0 -add 446   /data/project/studyforrest_ppa/sub-20/run-4_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t5

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-5_audio-ppa-grp.feat/reg_standard/stats/cope5 -mul 0 -add 420   /data/project/studyforrest_ppa/sub-20/run-5_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t5

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-6_audio-ppa-grp.feat/reg_standard/stats/cope5 -mul 0 -add 397   /data/project/studyforrest_ppa/sub-20/run-6_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t5

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-7_audio-ppa-grp.feat/reg_standard/stats/cope5 -mul 0 -add 500   /data/project/studyforrest_ppa/sub-20/run-7_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t5

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-8_audio-ppa-grp.feat/reg_standard/stats/cope5 -mul 0 -add 296   /data/project/studyforrest_ppa/sub-20/run-8_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t5

/usr/share/fsl/5.0/bin/fslmerge -t tdof_t5  /data/project/studyforrest_ppa/sub-20/run-1_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t5 /data/project/studyforrest_ppa/sub-20/run-2_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t5 /data/project/studyforrest_ppa/sub-20/run-3_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t5 /data/project/studyforrest_ppa/sub-20/run-4_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t5 /data/project/studyforrest_ppa/sub-20/run-5_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t5 /data/project/studyforrest_ppa/sub-20/run-6_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t5 /data/project/studyforrest_ppa/sub-20/run-7_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t5 /data/project/studyforrest_ppa/sub-20/run-8_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t5

/usr/share/fsl/5.0/bin/fslmaths tdof_t5 -mas mask tdof_t5

/usr/share/fsl/5.0/bin/fslmerge -t cope6  /data/project/studyforrest_ppa/sub-20/run-1_audio-ppa-grp.feat/reg_standard/stats/cope6 /data/project/studyforrest_ppa/sub-20/run-2_audio-ppa-grp.feat/reg_standard/stats/cope6 /data/project/studyforrest_ppa/sub-20/run-3_audio-ppa-grp.feat/reg_standard/stats/cope6 /data/project/studyforrest_ppa/sub-20/run-4_audio-ppa-grp.feat/reg_standard/stats/cope6 /data/project/studyforrest_ppa/sub-20/run-5_audio-ppa-grp.feat/reg_standard/stats/cope6 /data/project/studyforrest_ppa/sub-20/run-6_audio-ppa-grp.feat/reg_standard/stats/cope6 /data/project/studyforrest_ppa/sub-20/run-7_audio-ppa-grp.feat/reg_standard/stats/cope6 /data/project/studyforrest_ppa/sub-20/run-8_audio-ppa-grp.feat/reg_standard/stats/cope6

/usr/share/fsl/5.0/bin/fslmaths cope6 -mas mask cope6

printf '0.02917550625 ' >> design.lcon

/usr/share/fsl/5.0/bin/fslmerge -t varcope6  /data/project/studyforrest_ppa/sub-20/run-1_audio-ppa-grp.feat/reg_standard/stats/varcope6 /data/project/studyforrest_ppa/sub-20/run-2_audio-ppa-grp.feat/reg_standard/stats/varcope6 /data/project/studyforrest_ppa/sub-20/run-3_audio-ppa-grp.feat/reg_standard/stats/varcope6 /data/project/studyforrest_ppa/sub-20/run-4_audio-ppa-grp.feat/reg_standard/stats/varcope6 /data/project/studyforrest_ppa/sub-20/run-5_audio-ppa-grp.feat/reg_standard/stats/varcope6 /data/project/studyforrest_ppa/sub-20/run-6_audio-ppa-grp.feat/reg_standard/stats/varcope6 /data/project/studyforrest_ppa/sub-20/run-7_audio-ppa-grp.feat/reg_standard/stats/varcope6 /data/project/studyforrest_ppa/sub-20/run-8_audio-ppa-grp.feat/reg_standard/stats/varcope6

/usr/share/fsl/5.0/bin/fslmaths varcope6 -mas mask varcope6

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-1_audio-ppa-grp.feat/reg_standard/stats/cope6 -mul 0 -add 409   /data/project/studyforrest_ppa/sub-20/run-1_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t6

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-2_audio-ppa-grp.feat/reg_standard/stats/cope6 -mul 0 -add 399   /data/project/studyforrest_ppa/sub-20/run-2_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t6

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-3_audio-ppa-grp.feat/reg_standard/stats/cope6 -mul 0 -add 396   /data/project/studyforrest_ppa/sub-20/run-3_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t6

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-4_audio-ppa-grp.feat/reg_standard/stats/cope6 -mul 0 -add 446   /data/project/studyforrest_ppa/sub-20/run-4_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t6

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-5_audio-ppa-grp.feat/reg_standard/stats/cope6 -mul 0 -add 420   /data/project/studyforrest_ppa/sub-20/run-5_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t6

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-6_audio-ppa-grp.feat/reg_standard/stats/cope6 -mul 0 -add 397   /data/project/studyforrest_ppa/sub-20/run-6_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t6

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-7_audio-ppa-grp.feat/reg_standard/stats/cope6 -mul 0 -add 500   /data/project/studyforrest_ppa/sub-20/run-7_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t6

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-8_audio-ppa-grp.feat/reg_standard/stats/cope6 -mul 0 -add 296   /data/project/studyforrest_ppa/sub-20/run-8_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t6

/usr/share/fsl/5.0/bin/fslmerge -t tdof_t6  /data/project/studyforrest_ppa/sub-20/run-1_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t6 /data/project/studyforrest_ppa/sub-20/run-2_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t6 /data/project/studyforrest_ppa/sub-20/run-3_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t6 /data/project/studyforrest_ppa/sub-20/run-4_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t6 /data/project/studyforrest_ppa/sub-20/run-5_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t6 /data/project/studyforrest_ppa/sub-20/run-6_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t6 /data/project/studyforrest_ppa/sub-20/run-7_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t6 /data/project/studyforrest_ppa/sub-20/run-8_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t6

/usr/share/fsl/5.0/bin/fslmaths tdof_t6 -mas mask tdof_t6

/usr/share/fsl/5.0/bin/fslmerge -t cope7  /data/project/studyforrest_ppa/sub-20/run-1_audio-ppa-grp.feat/reg_standard/stats/cope7 /data/project/studyforrest_ppa/sub-20/run-2_audio-ppa-grp.feat/reg_standard/stats/cope7 /data/project/studyforrest_ppa/sub-20/run-3_audio-ppa-grp.feat/reg_standard/stats/cope7 /data/project/studyforrest_ppa/sub-20/run-4_audio-ppa-grp.feat/reg_standard/stats/cope7 /data/project/studyforrest_ppa/sub-20/run-5_audio-ppa-grp.feat/reg_standard/stats/cope7 /data/project/studyforrest_ppa/sub-20/run-6_audio-ppa-grp.feat/reg_standard/stats/cope7 /data/project/studyforrest_ppa/sub-20/run-7_audio-ppa-grp.feat/reg_standard/stats/cope7 /data/project/studyforrest_ppa/sub-20/run-8_audio-ppa-grp.feat/reg_standard/stats/cope7

/usr/share/fsl/5.0/bin/fslmaths cope7 -mas mask cope7

printf '0.0248213025 ' >> design.lcon

/usr/share/fsl/5.0/bin/fslmerge -t varcope7  /data/project/studyforrest_ppa/sub-20/run-1_audio-ppa-grp.feat/reg_standard/stats/varcope7 /data/project/studyforrest_ppa/sub-20/run-2_audio-ppa-grp.feat/reg_standard/stats/varcope7 /data/project/studyforrest_ppa/sub-20/run-3_audio-ppa-grp.feat/reg_standard/stats/varcope7 /data/project/studyforrest_ppa/sub-20/run-4_audio-ppa-grp.feat/reg_standard/stats/varcope7 /data/project/studyforrest_ppa/sub-20/run-5_audio-ppa-grp.feat/reg_standard/stats/varcope7 /data/project/studyforrest_ppa/sub-20/run-6_audio-ppa-grp.feat/reg_standard/stats/varcope7 /data/project/studyforrest_ppa/sub-20/run-7_audio-ppa-grp.feat/reg_standard/stats/varcope7 /data/project/studyforrest_ppa/sub-20/run-8_audio-ppa-grp.feat/reg_standard/stats/varcope7

/usr/share/fsl/5.0/bin/fslmaths varcope7 -mas mask varcope7

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-1_audio-ppa-grp.feat/reg_standard/stats/cope7 -mul 0 -add 409   /data/project/studyforrest_ppa/sub-20/run-1_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t7

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-2_audio-ppa-grp.feat/reg_standard/stats/cope7 -mul 0 -add 399   /data/project/studyforrest_ppa/sub-20/run-2_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t7

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-3_audio-ppa-grp.feat/reg_standard/stats/cope7 -mul 0 -add 396   /data/project/studyforrest_ppa/sub-20/run-3_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t7

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-4_audio-ppa-grp.feat/reg_standard/stats/cope7 -mul 0 -add 446   /data/project/studyforrest_ppa/sub-20/run-4_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t7

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-5_audio-ppa-grp.feat/reg_standard/stats/cope7 -mul 0 -add 420   /data/project/studyforrest_ppa/sub-20/run-5_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t7

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-6_audio-ppa-grp.feat/reg_standard/stats/cope7 -mul 0 -add 397   /data/project/studyforrest_ppa/sub-20/run-6_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t7

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-7_audio-ppa-grp.feat/reg_standard/stats/cope7 -mul 0 -add 500   /data/project/studyforrest_ppa/sub-20/run-7_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t7

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-8_audio-ppa-grp.feat/reg_standard/stats/cope7 -mul 0 -add 296   /data/project/studyforrest_ppa/sub-20/run-8_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t7

/usr/share/fsl/5.0/bin/fslmerge -t tdof_t7  /data/project/studyforrest_ppa/sub-20/run-1_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t7 /data/project/studyforrest_ppa/sub-20/run-2_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t7 /data/project/studyforrest_ppa/sub-20/run-3_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t7 /data/project/studyforrest_ppa/sub-20/run-4_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t7 /data/project/studyforrest_ppa/sub-20/run-5_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t7 /data/project/studyforrest_ppa/sub-20/run-6_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t7 /data/project/studyforrest_ppa/sub-20/run-7_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t7 /data/project/studyforrest_ppa/sub-20/run-8_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t7

/usr/share/fsl/5.0/bin/fslmaths tdof_t7 -mas mask tdof_t7

/usr/share/fsl/5.0/bin/fslmerge -t cope8  /data/project/studyforrest_ppa/sub-20/run-1_audio-ppa-grp.feat/reg_standard/stats/cope8 /data/project/studyforrest_ppa/sub-20/run-2_audio-ppa-grp.feat/reg_standard/stats/cope8 /data/project/studyforrest_ppa/sub-20/run-3_audio-ppa-grp.feat/reg_standard/stats/cope8 /data/project/studyforrest_ppa/sub-20/run-4_audio-ppa-grp.feat/reg_standard/stats/cope8 /data/project/studyforrest_ppa/sub-20/run-5_audio-ppa-grp.feat/reg_standard/stats/cope8 /data/project/studyforrest_ppa/sub-20/run-6_audio-ppa-grp.feat/reg_standard/stats/cope8 /data/project/studyforrest_ppa/sub-20/run-7_audio-ppa-grp.feat/reg_standard/stats/cope8 /data/project/studyforrest_ppa/sub-20/run-8_audio-ppa-grp.feat/reg_standard/stats/cope8

/usr/share/fsl/5.0/bin/fslmaths cope8 -mas mask cope8

printf '0.08684008375 ' >> design.lcon

/usr/share/fsl/5.0/bin/fslmerge -t varcope8  /data/project/studyforrest_ppa/sub-20/run-1_audio-ppa-grp.feat/reg_standard/stats/varcope8 /data/project/studyforrest_ppa/sub-20/run-2_audio-ppa-grp.feat/reg_standard/stats/varcope8 /data/project/studyforrest_ppa/sub-20/run-3_audio-ppa-grp.feat/reg_standard/stats/varcope8 /data/project/studyforrest_ppa/sub-20/run-4_audio-ppa-grp.feat/reg_standard/stats/varcope8 /data/project/studyforrest_ppa/sub-20/run-5_audio-ppa-grp.feat/reg_standard/stats/varcope8 /data/project/studyforrest_ppa/sub-20/run-6_audio-ppa-grp.feat/reg_standard/stats/varcope8 /data/project/studyforrest_ppa/sub-20/run-7_audio-ppa-grp.feat/reg_standard/stats/varcope8 /data/project/studyforrest_ppa/sub-20/run-8_audio-ppa-grp.feat/reg_standard/stats/varcope8

/usr/share/fsl/5.0/bin/fslmaths varcope8 -mas mask varcope8

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-1_audio-ppa-grp.feat/reg_standard/stats/cope8 -mul 0 -add 409   /data/project/studyforrest_ppa/sub-20/run-1_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t8

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-2_audio-ppa-grp.feat/reg_standard/stats/cope8 -mul 0 -add 399   /data/project/studyforrest_ppa/sub-20/run-2_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t8

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-3_audio-ppa-grp.feat/reg_standard/stats/cope8 -mul 0 -add 396   /data/project/studyforrest_ppa/sub-20/run-3_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t8

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-4_audio-ppa-grp.feat/reg_standard/stats/cope8 -mul 0 -add 446   /data/project/studyforrest_ppa/sub-20/run-4_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t8

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-5_audio-ppa-grp.feat/reg_standard/stats/cope8 -mul 0 -add 420   /data/project/studyforrest_ppa/sub-20/run-5_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t8

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-6_audio-ppa-grp.feat/reg_standard/stats/cope8 -mul 0 -add 397   /data/project/studyforrest_ppa/sub-20/run-6_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t8

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-7_audio-ppa-grp.feat/reg_standard/stats/cope8 -mul 0 -add 500   /data/project/studyforrest_ppa/sub-20/run-7_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t8

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-8_audio-ppa-grp.feat/reg_standard/stats/cope8 -mul 0 -add 296   /data/project/studyforrest_ppa/sub-20/run-8_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t8

/usr/share/fsl/5.0/bin/fslmerge -t tdof_t8  /data/project/studyforrest_ppa/sub-20/run-1_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t8 /data/project/studyforrest_ppa/sub-20/run-2_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t8 /data/project/studyforrest_ppa/sub-20/run-3_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t8 /data/project/studyforrest_ppa/sub-20/run-4_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t8 /data/project/studyforrest_ppa/sub-20/run-5_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t8 /data/project/studyforrest_ppa/sub-20/run-6_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t8 /data/project/studyforrest_ppa/sub-20/run-7_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t8 /data/project/studyforrest_ppa/sub-20/run-8_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t8

/usr/share/fsl/5.0/bin/fslmaths tdof_t8 -mas mask tdof_t8

/usr/share/fsl/5.0/bin/fslmerge -t cope9  /data/project/studyforrest_ppa/sub-20/run-1_audio-ppa-grp.feat/reg_standard/stats/cope9 /data/project/studyforrest_ppa/sub-20/run-2_audio-ppa-grp.feat/reg_standard/stats/cope9 /data/project/studyforrest_ppa/sub-20/run-3_audio-ppa-grp.feat/reg_standard/stats/cope9 /data/project/studyforrest_ppa/sub-20/run-4_audio-ppa-grp.feat/reg_standard/stats/cope9 /data/project/studyforrest_ppa/sub-20/run-5_audio-ppa-grp.feat/reg_standard/stats/cope9 /data/project/studyforrest_ppa/sub-20/run-6_audio-ppa-grp.feat/reg_standard/stats/cope9 /data/project/studyforrest_ppa/sub-20/run-7_audio-ppa-grp.feat/reg_standard/stats/cope9 /data/project/studyforrest_ppa/sub-20/run-8_audio-ppa-grp.feat/reg_standard/stats/cope9

/usr/share/fsl/5.0/bin/fslmaths cope9 -mas mask cope9

printf '0.06037862625 ' >> design.lcon

/usr/share/fsl/5.0/bin/fslmerge -t varcope9  /data/project/studyforrest_ppa/sub-20/run-1_audio-ppa-grp.feat/reg_standard/stats/varcope9 /data/project/studyforrest_ppa/sub-20/run-2_audio-ppa-grp.feat/reg_standard/stats/varcope9 /data/project/studyforrest_ppa/sub-20/run-3_audio-ppa-grp.feat/reg_standard/stats/varcope9 /data/project/studyforrest_ppa/sub-20/run-4_audio-ppa-grp.feat/reg_standard/stats/varcope9 /data/project/studyforrest_ppa/sub-20/run-5_audio-ppa-grp.feat/reg_standard/stats/varcope9 /data/project/studyforrest_ppa/sub-20/run-6_audio-ppa-grp.feat/reg_standard/stats/varcope9 /data/project/studyforrest_ppa/sub-20/run-7_audio-ppa-grp.feat/reg_standard/stats/varcope9 /data/project/studyforrest_ppa/sub-20/run-8_audio-ppa-grp.feat/reg_standard/stats/varcope9

/usr/share/fsl/5.0/bin/fslmaths varcope9 -mas mask varcope9

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-1_audio-ppa-grp.feat/reg_standard/stats/cope9 -mul 0 -add 409   /data/project/studyforrest_ppa/sub-20/run-1_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t9

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-2_audio-ppa-grp.feat/reg_standard/stats/cope9 -mul 0 -add 399   /data/project/studyforrest_ppa/sub-20/run-2_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t9

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-3_audio-ppa-grp.feat/reg_standard/stats/cope9 -mul 0 -add 396   /data/project/studyforrest_ppa/sub-20/run-3_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t9

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-4_audio-ppa-grp.feat/reg_standard/stats/cope9 -mul 0 -add 446   /data/project/studyforrest_ppa/sub-20/run-4_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t9

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-5_audio-ppa-grp.feat/reg_standard/stats/cope9 -mul 0 -add 420   /data/project/studyforrest_ppa/sub-20/run-5_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t9

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-6_audio-ppa-grp.feat/reg_standard/stats/cope9 -mul 0 -add 397   /data/project/studyforrest_ppa/sub-20/run-6_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t9

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-7_audio-ppa-grp.feat/reg_standard/stats/cope9 -mul 0 -add 500   /data/project/studyforrest_ppa/sub-20/run-7_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t9

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-8_audio-ppa-grp.feat/reg_standard/stats/cope9 -mul 0 -add 296   /data/project/studyforrest_ppa/sub-20/run-8_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t9

/usr/share/fsl/5.0/bin/fslmerge -t tdof_t9  /data/project/studyforrest_ppa/sub-20/run-1_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t9 /data/project/studyforrest_ppa/sub-20/run-2_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t9 /data/project/studyforrest_ppa/sub-20/run-3_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t9 /data/project/studyforrest_ppa/sub-20/run-4_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t9 /data/project/studyforrest_ppa/sub-20/run-5_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t9 /data/project/studyforrest_ppa/sub-20/run-6_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t9 /data/project/studyforrest_ppa/sub-20/run-7_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t9 /data/project/studyforrest_ppa/sub-20/run-8_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t9

/usr/share/fsl/5.0/bin/fslmaths tdof_t9 -mas mask tdof_t9

/usr/share/fsl/5.0/bin/fslmerge -t cope10  /data/project/studyforrest_ppa/sub-20/run-1_audio-ppa-grp.feat/reg_standard/stats/cope10 /data/project/studyforrest_ppa/sub-20/run-2_audio-ppa-grp.feat/reg_standard/stats/cope10 /data/project/studyforrest_ppa/sub-20/run-3_audio-ppa-grp.feat/reg_standard/stats/cope10 /data/project/studyforrest_ppa/sub-20/run-4_audio-ppa-grp.feat/reg_standard/stats/cope10 /data/project/studyforrest_ppa/sub-20/run-5_audio-ppa-grp.feat/reg_standard/stats/cope10 /data/project/studyforrest_ppa/sub-20/run-6_audio-ppa-grp.feat/reg_standard/stats/cope10 /data/project/studyforrest_ppa/sub-20/run-7_audio-ppa-grp.feat/reg_standard/stats/cope10 /data/project/studyforrest_ppa/sub-20/run-8_audio-ppa-grp.feat/reg_standard/stats/cope10

/usr/share/fsl/5.0/bin/fslmaths cope10 -mas mask cope10

printf '0.03953572625 ' >> design.lcon

/usr/share/fsl/5.0/bin/fslmerge -t varcope10  /data/project/studyforrest_ppa/sub-20/run-1_audio-ppa-grp.feat/reg_standard/stats/varcope10 /data/project/studyforrest_ppa/sub-20/run-2_audio-ppa-grp.feat/reg_standard/stats/varcope10 /data/project/studyforrest_ppa/sub-20/run-3_audio-ppa-grp.feat/reg_standard/stats/varcope10 /data/project/studyforrest_ppa/sub-20/run-4_audio-ppa-grp.feat/reg_standard/stats/varcope10 /data/project/studyforrest_ppa/sub-20/run-5_audio-ppa-grp.feat/reg_standard/stats/varcope10 /data/project/studyforrest_ppa/sub-20/run-6_audio-ppa-grp.feat/reg_standard/stats/varcope10 /data/project/studyforrest_ppa/sub-20/run-7_audio-ppa-grp.feat/reg_standard/stats/varcope10 /data/project/studyforrest_ppa/sub-20/run-8_audio-ppa-grp.feat/reg_standard/stats/varcope10

/usr/share/fsl/5.0/bin/fslmaths varcope10 -mas mask varcope10

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-1_audio-ppa-grp.feat/reg_standard/stats/cope10 -mul 0 -add 409   /data/project/studyforrest_ppa/sub-20/run-1_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t10

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-2_audio-ppa-grp.feat/reg_standard/stats/cope10 -mul 0 -add 399   /data/project/studyforrest_ppa/sub-20/run-2_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t10

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-3_audio-ppa-grp.feat/reg_standard/stats/cope10 -mul 0 -add 396   /data/project/studyforrest_ppa/sub-20/run-3_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t10

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-4_audio-ppa-grp.feat/reg_standard/stats/cope10 -mul 0 -add 446   /data/project/studyforrest_ppa/sub-20/run-4_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t10

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-5_audio-ppa-grp.feat/reg_standard/stats/cope10 -mul 0 -add 420   /data/project/studyforrest_ppa/sub-20/run-5_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t10

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-6_audio-ppa-grp.feat/reg_standard/stats/cope10 -mul 0 -add 397   /data/project/studyforrest_ppa/sub-20/run-6_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t10

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-7_audio-ppa-grp.feat/reg_standard/stats/cope10 -mul 0 -add 500   /data/project/studyforrest_ppa/sub-20/run-7_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t10

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-8_audio-ppa-grp.feat/reg_standard/stats/cope10 -mul 0 -add 296   /data/project/studyforrest_ppa/sub-20/run-8_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t10

/usr/share/fsl/5.0/bin/fslmerge -t tdof_t10  /data/project/studyforrest_ppa/sub-20/run-1_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t10 /data/project/studyforrest_ppa/sub-20/run-2_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t10 /data/project/studyforrest_ppa/sub-20/run-3_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t10 /data/project/studyforrest_ppa/sub-20/run-4_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t10 /data/project/studyforrest_ppa/sub-20/run-5_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t10 /data/project/studyforrest_ppa/sub-20/run-6_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t10 /data/project/studyforrest_ppa/sub-20/run-7_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t10 /data/project/studyforrest_ppa/sub-20/run-8_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t10

/usr/share/fsl/5.0/bin/fslmaths tdof_t10 -mas mask tdof_t10

/usr/share/fsl/5.0/bin/fslmerge -t cope11  /data/project/studyforrest_ppa/sub-20/run-1_audio-ppa-grp.feat/reg_standard/stats/cope11 /data/project/studyforrest_ppa/sub-20/run-2_audio-ppa-grp.feat/reg_standard/stats/cope11 /data/project/studyforrest_ppa/sub-20/run-3_audio-ppa-grp.feat/reg_standard/stats/cope11 /data/project/studyforrest_ppa/sub-20/run-4_audio-ppa-grp.feat/reg_standard/stats/cope11 /data/project/studyforrest_ppa/sub-20/run-5_audio-ppa-grp.feat/reg_standard/stats/cope11 /data/project/studyforrest_ppa/sub-20/run-6_audio-ppa-grp.feat/reg_standard/stats/cope11 /data/project/studyforrest_ppa/sub-20/run-7_audio-ppa-grp.feat/reg_standard/stats/cope11 /data/project/studyforrest_ppa/sub-20/run-8_audio-ppa-grp.feat/reg_standard/stats/cope11

/usr/share/fsl/5.0/bin/fslmaths cope11 -mas mask cope11

printf '0.0465150475 ' >> design.lcon

/usr/share/fsl/5.0/bin/fslmerge -t varcope11  /data/project/studyforrest_ppa/sub-20/run-1_audio-ppa-grp.feat/reg_standard/stats/varcope11 /data/project/studyforrest_ppa/sub-20/run-2_audio-ppa-grp.feat/reg_standard/stats/varcope11 /data/project/studyforrest_ppa/sub-20/run-3_audio-ppa-grp.feat/reg_standard/stats/varcope11 /data/project/studyforrest_ppa/sub-20/run-4_audio-ppa-grp.feat/reg_standard/stats/varcope11 /data/project/studyforrest_ppa/sub-20/run-5_audio-ppa-grp.feat/reg_standard/stats/varcope11 /data/project/studyforrest_ppa/sub-20/run-6_audio-ppa-grp.feat/reg_standard/stats/varcope11 /data/project/studyforrest_ppa/sub-20/run-7_audio-ppa-grp.feat/reg_standard/stats/varcope11 /data/project/studyforrest_ppa/sub-20/run-8_audio-ppa-grp.feat/reg_standard/stats/varcope11

/usr/share/fsl/5.0/bin/fslmaths varcope11 -mas mask varcope11

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-1_audio-ppa-grp.feat/reg_standard/stats/cope11 -mul 0 -add 409   /data/project/studyforrest_ppa/sub-20/run-1_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t11

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-2_audio-ppa-grp.feat/reg_standard/stats/cope11 -mul 0 -add 399   /data/project/studyforrest_ppa/sub-20/run-2_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t11

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-3_audio-ppa-grp.feat/reg_standard/stats/cope11 -mul 0 -add 396   /data/project/studyforrest_ppa/sub-20/run-3_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t11

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-4_audio-ppa-grp.feat/reg_standard/stats/cope11 -mul 0 -add 446   /data/project/studyforrest_ppa/sub-20/run-4_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t11

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-5_audio-ppa-grp.feat/reg_standard/stats/cope11 -mul 0 -add 420   /data/project/studyforrest_ppa/sub-20/run-5_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t11

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-6_audio-ppa-grp.feat/reg_standard/stats/cope11 -mul 0 -add 397   /data/project/studyforrest_ppa/sub-20/run-6_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t11

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-7_audio-ppa-grp.feat/reg_standard/stats/cope11 -mul 0 -add 500   /data/project/studyforrest_ppa/sub-20/run-7_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t11

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-8_audio-ppa-grp.feat/reg_standard/stats/cope11 -mul 0 -add 296   /data/project/studyforrest_ppa/sub-20/run-8_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t11

/usr/share/fsl/5.0/bin/fslmerge -t tdof_t11  /data/project/studyforrest_ppa/sub-20/run-1_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t11 /data/project/studyforrest_ppa/sub-20/run-2_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t11 /data/project/studyforrest_ppa/sub-20/run-3_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t11 /data/project/studyforrest_ppa/sub-20/run-4_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t11 /data/project/studyforrest_ppa/sub-20/run-5_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t11 /data/project/studyforrest_ppa/sub-20/run-6_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t11 /data/project/studyforrest_ppa/sub-20/run-7_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t11 /data/project/studyforrest_ppa/sub-20/run-8_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t11

/usr/share/fsl/5.0/bin/fslmaths tdof_t11 -mas mask tdof_t11

/usr/share/fsl/5.0/bin/fslmerge -t cope12  /data/project/studyforrest_ppa/sub-20/run-1_audio-ppa-grp.feat/reg_standard/stats/cope12 /data/project/studyforrest_ppa/sub-20/run-2_audio-ppa-grp.feat/reg_standard/stats/cope12 /data/project/studyforrest_ppa/sub-20/run-3_audio-ppa-grp.feat/reg_standard/stats/cope12 /data/project/studyforrest_ppa/sub-20/run-4_audio-ppa-grp.feat/reg_standard/stats/cope12 /data/project/studyforrest_ppa/sub-20/run-5_audio-ppa-grp.feat/reg_standard/stats/cope12 /data/project/studyforrest_ppa/sub-20/run-6_audio-ppa-grp.feat/reg_standard/stats/cope12 /data/project/studyforrest_ppa/sub-20/run-7_audio-ppa-grp.feat/reg_standard/stats/cope12 /data/project/studyforrest_ppa/sub-20/run-8_audio-ppa-grp.feat/reg_standard/stats/cope12

/usr/share/fsl/5.0/bin/fslmaths cope12 -mas mask cope12

printf '0.029742005 ' >> design.lcon

/usr/share/fsl/5.0/bin/fslmerge -t varcope12  /data/project/studyforrest_ppa/sub-20/run-1_audio-ppa-grp.feat/reg_standard/stats/varcope12 /data/project/studyforrest_ppa/sub-20/run-2_audio-ppa-grp.feat/reg_standard/stats/varcope12 /data/project/studyforrest_ppa/sub-20/run-3_audio-ppa-grp.feat/reg_standard/stats/varcope12 /data/project/studyforrest_ppa/sub-20/run-4_audio-ppa-grp.feat/reg_standard/stats/varcope12 /data/project/studyforrest_ppa/sub-20/run-5_audio-ppa-grp.feat/reg_standard/stats/varcope12 /data/project/studyforrest_ppa/sub-20/run-6_audio-ppa-grp.feat/reg_standard/stats/varcope12 /data/project/studyforrest_ppa/sub-20/run-7_audio-ppa-grp.feat/reg_standard/stats/varcope12 /data/project/studyforrest_ppa/sub-20/run-8_audio-ppa-grp.feat/reg_standard/stats/varcope12

/usr/share/fsl/5.0/bin/fslmaths varcope12 -mas mask varcope12

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-1_audio-ppa-grp.feat/reg_standard/stats/cope12 -mul 0 -add 409   /data/project/studyforrest_ppa/sub-20/run-1_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t12

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-2_audio-ppa-grp.feat/reg_standard/stats/cope12 -mul 0 -add 399   /data/project/studyforrest_ppa/sub-20/run-2_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t12

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-3_audio-ppa-grp.feat/reg_standard/stats/cope12 -mul 0 -add 396   /data/project/studyforrest_ppa/sub-20/run-3_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t12

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-4_audio-ppa-grp.feat/reg_standard/stats/cope12 -mul 0 -add 446   /data/project/studyforrest_ppa/sub-20/run-4_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t12

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-5_audio-ppa-grp.feat/reg_standard/stats/cope12 -mul 0 -add 420   /data/project/studyforrest_ppa/sub-20/run-5_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t12

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-6_audio-ppa-grp.feat/reg_standard/stats/cope12 -mul 0 -add 397   /data/project/studyforrest_ppa/sub-20/run-6_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t12

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-7_audio-ppa-grp.feat/reg_standard/stats/cope12 -mul 0 -add 500   /data/project/studyforrest_ppa/sub-20/run-7_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t12

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-8_audio-ppa-grp.feat/reg_standard/stats/cope12 -mul 0 -add 296   /data/project/studyforrest_ppa/sub-20/run-8_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t12

/usr/share/fsl/5.0/bin/fslmerge -t tdof_t12  /data/project/studyforrest_ppa/sub-20/run-1_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t12 /data/project/studyforrest_ppa/sub-20/run-2_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t12 /data/project/studyforrest_ppa/sub-20/run-3_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t12 /data/project/studyforrest_ppa/sub-20/run-4_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t12 /data/project/studyforrest_ppa/sub-20/run-5_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t12 /data/project/studyforrest_ppa/sub-20/run-6_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t12 /data/project/studyforrest_ppa/sub-20/run-7_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t12 /data/project/studyforrest_ppa/sub-20/run-8_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t12

/usr/share/fsl/5.0/bin/fslmaths tdof_t12 -mas mask tdof_t12

/usr/share/fsl/5.0/bin/fslmerge -t cope13  /data/project/studyforrest_ppa/sub-20/run-1_audio-ppa-grp.feat/reg_standard/stats/cope13 /data/project/studyforrest_ppa/sub-20/run-2_audio-ppa-grp.feat/reg_standard/stats/cope13 /data/project/studyforrest_ppa/sub-20/run-3_audio-ppa-grp.feat/reg_standard/stats/cope13 /data/project/studyforrest_ppa/sub-20/run-4_audio-ppa-grp.feat/reg_standard/stats/cope13 /data/project/studyforrest_ppa/sub-20/run-5_audio-ppa-grp.feat/reg_standard/stats/cope13 /data/project/studyforrest_ppa/sub-20/run-6_audio-ppa-grp.feat/reg_standard/stats/cope13 /data/project/studyforrest_ppa/sub-20/run-7_audio-ppa-grp.feat/reg_standard/stats/cope13 /data/project/studyforrest_ppa/sub-20/run-8_audio-ppa-grp.feat/reg_standard/stats/cope13

/usr/share/fsl/5.0/bin/fslmaths cope13 -mas mask cope13

printf '0.04307867 ' >> design.lcon

/usr/share/fsl/5.0/bin/fslmerge -t varcope13  /data/project/studyforrest_ppa/sub-20/run-1_audio-ppa-grp.feat/reg_standard/stats/varcope13 /data/project/studyforrest_ppa/sub-20/run-2_audio-ppa-grp.feat/reg_standard/stats/varcope13 /data/project/studyforrest_ppa/sub-20/run-3_audio-ppa-grp.feat/reg_standard/stats/varcope13 /data/project/studyforrest_ppa/sub-20/run-4_audio-ppa-grp.feat/reg_standard/stats/varcope13 /data/project/studyforrest_ppa/sub-20/run-5_audio-ppa-grp.feat/reg_standard/stats/varcope13 /data/project/studyforrest_ppa/sub-20/run-6_audio-ppa-grp.feat/reg_standard/stats/varcope13 /data/project/studyforrest_ppa/sub-20/run-7_audio-ppa-grp.feat/reg_standard/stats/varcope13 /data/project/studyforrest_ppa/sub-20/run-8_audio-ppa-grp.feat/reg_standard/stats/varcope13

/usr/share/fsl/5.0/bin/fslmaths varcope13 -mas mask varcope13

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-1_audio-ppa-grp.feat/reg_standard/stats/cope13 -mul 0 -add 409   /data/project/studyforrest_ppa/sub-20/run-1_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t13

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-2_audio-ppa-grp.feat/reg_standard/stats/cope13 -mul 0 -add 399   /data/project/studyforrest_ppa/sub-20/run-2_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t13

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-3_audio-ppa-grp.feat/reg_standard/stats/cope13 -mul 0 -add 396   /data/project/studyforrest_ppa/sub-20/run-3_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t13

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-4_audio-ppa-grp.feat/reg_standard/stats/cope13 -mul 0 -add 446   /data/project/studyforrest_ppa/sub-20/run-4_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t13

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-5_audio-ppa-grp.feat/reg_standard/stats/cope13 -mul 0 -add 420   /data/project/studyforrest_ppa/sub-20/run-5_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t13

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-6_audio-ppa-grp.feat/reg_standard/stats/cope13 -mul 0 -add 397   /data/project/studyforrest_ppa/sub-20/run-6_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t13

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-7_audio-ppa-grp.feat/reg_standard/stats/cope13 -mul 0 -add 500   /data/project/studyforrest_ppa/sub-20/run-7_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t13

/usr/share/fsl/5.0/bin/fslmaths /data/project/studyforrest_ppa/sub-20/run-8_audio-ppa-grp.feat/reg_standard/stats/cope13 -mul 0 -add 296   /data/project/studyforrest_ppa/sub-20/run-8_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t13

/usr/share/fsl/5.0/bin/fslmerge -t tdof_t13  /data/project/studyforrest_ppa/sub-20/run-1_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t13 /data/project/studyforrest_ppa/sub-20/run-2_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t13 /data/project/studyforrest_ppa/sub-20/run-3_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t13 /data/project/studyforrest_ppa/sub-20/run-4_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t13 /data/project/studyforrest_ppa/sub-20/run-5_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t13 /data/project/studyforrest_ppa/sub-20/run-6_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t13 /data/project/studyforrest_ppa/sub-20/run-7_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t13 /data/project/studyforrest_ppa/sub-20/run-8_audio-ppa-grp.feat/reg_standard/stats/FEtdof_t13

/usr/share/fsl/5.0/bin/fslmaths tdof_t13 -mas mask tdof_t13