Merge remote-tracking branch 'refs/remotes/origin/master'

README.md

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+ **CMOS-MEA recordings of mouse retinal ganglion cells upon smooth electrical stimulation**  
+ 
+ This repository contains data obtained from multi-electrode array recordings of mouse retinal ganglion cells upon smooth electrical stimulation. Both the raw and the preprocessed (spike-sorted) files are available in the respective folders (raw, sorted). You can open and browse the data files using the CMOS-MEA-Tools Software (https://www.multichannelsystems.com/software/cmos-mea-tools, version 2.1.0). This data is described and analysed in the paper Höfling, L., Oesterle, J., Berens, P., & Zeck, G. (2020). Probing and predicting ganglion cell responses to smooth electrical stimulation in healthy and blind mouse retina. Scientific Reports, 10(1), 5248. https://doi.org/10.1038/s41598-020-61899-y.
+ 
+### Navigating the repository ###
+Folder structure is as follows:  
+(datatype)/(mouse line)/(experimental session)/  
+where datatype can be raw or sorted (i.e. spike sorted), and mouse line can be wildtype or rd10  
+Files with filename containing "standard" are recordings upon electrical stimulation;  
+files with filename containing "spont" are recordings of spontaneous activity;  
+files with filename containing "470nm" (or similar) are recordings upon light stimulation.
+
+### Analysis code ###
+
+... can be found here: https://github.com/lhoefling/rgc-elstim-modeling/

datacite.yml

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+authors:
+  -
+    firstname: Larissa
+    lastname: Höfling
+    affiliation: 'Institute for Ophthalmic Research, University of Tübingen, Germany'
+  -
+    firstname: Günther
+    lastname: Zeck
+    affiliation: 'Natural and Medical Sciences Institute at the University of Tübingen, Reutlingen, Germany'
+title: 'CMOS-MEA recordings of mouse retinal ganglion cells upon smooth electrical stimulation'
+description: "This repository contains data obtained from multi-electrode array recordings \n of mouse retinal ganglion cells upon smooth electrical stimulation. Both the raw and the preprocessed (spike-sorted) files are available in the respective folders (raw, sorted). \n You can open and browse the data files using the CMOS-MEA-Tools Software (https://www.multichannelsystems.com/software/cmos-mea-tools, version 2.1.0). \n\nThis data is described and analysed in the paper Höfling, L., Oesterle, J., Berens, P., & Zeck, G. (2020). Probing and predicting ganglion cell responses to smooth electrical stimulation in healthy and blind mouse retina. Scientific Reports, 10(1), 5248. https://doi.org/10.1038/s41598-020-61899-y"
+keywords:
+  - Neuroscience
+  - 'electrical stimulation'
+  - 'mouse retina'
+  - 'retinal prosthetics'
+  - 'micro-electrode array recordings'
+license:
+  name: 'Creative Commons CC BY-NC'
+  url: 'https://creativecommons.org/licenses/by-nc/4.0/'
+funding:
+  - 'Baden-Württemberg Stiftung (NEU013)'
+  - 'German Research Foundation SFB 1233 "Robust Vision” (project number 276693517)'
+  - 'German Research Foundation Heisenberg Professorship (BE5601/4-1)'
+  - "German Ministry of Science and Education (BMBF, FKZ 01GQ1601 and FKZ 031L0059A)\n"
+references:
+  -
+    id: 'doi:10.1038/s41598-020-61899-y'
+    reftype: 'IsSupplementTo'
+    citation: "Höfling, L., Oesterle, J., Berens, P., & Zeck, G. (2020). Probing and predicting ganglion cell responses to smooth electrical stimulation in healthy and blind mouse retina. Scientific Reports, 10(1), 5248. https://doi.org/10.1038/s41598-020-61899-y"
+
+resourcetype: Dataset
+templateversion: 1.2