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README.md

Schottdorf, Keil et al 2015

Data from the study

Schottdorf M, Keil W, Coppola D, White LE, Wolf F (2015) Random Wiring, Ganglion Cell Mosaics, and the Functional Architecture of the Visual Cortex. PLoS Comput Biol 11(11): e1004602. https://doi.org/10.1371/journal.pcbi.1004602

Files

Schottdorf_Keil_et_al_2015_cat_OI_data.zip

  • Description: optical imaging data from cat primary visual cortex, N = 13 hemispheres, obtained in the lab of Prof. Zoltan Kisvarday
  • Date: 2015-12-16
  • Keywords: optical imaging, orientation preference, opm, cat, v1, primary visual cortex

Schottdorf_Keil_et_al_2015_treeshrew_OI_data.zip

  • Description: optical imaging data from tree shrew primary visual cortex, N = 26 hemispheres, obtained by Leonard E. White and David Coppola in the lab of Prof. David Fitzpatrick
  • Date: 2015-09-28
  • Keywords: tree shrew, optical imaging, orientation preference, v1, orientation preference domains

Schottdorf_Keil_et_al_2015_galago_OI_data.zip

  • Description: optical imaging data from galago primary visual cortex, N = 9 hemispheres, obtained by Leonard E. White and David Coppola in the lab of Prof. David Fitzpatrick
  • Date: 2015-09-28
  • Keywords: galago, optical imaging, orientation preference, v1, orientation preference domains

Schottdorf_Keil_et_al_2015_normal_ferret_OI_data.zip

  • Description: optical imaging data from ferret primary visual cortex, N = 82 hemispheres, obtained by Leonard E. White and David Coppola in the lab of Prof. David Fitzpatrick
  • Date: 2015-09-28
  • Keywords: ferret, optical imaging, orientation preference, v1, orientation preference domains

Schottdorf_Keil_et_al_2015_dark_reared_ferrets_OI_data.zip

  • Description: optical imaging data from dark-reared ferret primary visual cortex, N = 21 hemispheres, obtained by Leonard E. White and David Coppola in the lab of Prof. David Fitzpatrick
  • Date: 2015-09-28
  • Keywords: ferrets, dark-reared, optical imaging, v1, orientation preference domains
Datacite.yml
Title A dataset of 151 visual cortical orientation preference maps from four species.
Authors Schottdorf,Manuel;Max Planck Institute for Dynamics and Self-Organization, Göttingen, Germany, Bernstein Center for Computational Neuroscience, Göttingen, Germany, Bernstein Focus for Neurotechnology, Göttingen, Germany, Faculty of Physics, University of Göttingen, Göttingen, Germany, Institute for Theoretical Physics, University of Würzburg, Würzburg, Germany.;ORCID:0000-0002-5468-4255
Keil,Wolfgang;Max Planck Institute for Dynamics and Self-Organization, Göttingen, Germany, Bernstein Center for Computational Neuroscience, Göttingen, Germany, Bernstein Focus for Neurotechnology, Göttingen, Germany, Faculty of Physics, University of Göttingen, Göttingen, Germany, Center for Studies in Physics and Biology, The Rockefeller University, New York, New York, United States of America;ORCID:0000-0002-8176-8585
Coppola,David M.;Department of Biology, Randolph-Macon College, Ashland, Virginia, United States of America.
White,Leonard E.;Department of Orthopaedic Surgery, Duke Institute for Brain Sciences, Duke University, Durham, North Carolina, United States of America.
Wolf,Fred;Max Planck Institute for Dynamics and Self-Organization, Göttingen, Germany, Bernstein Center for Computational Neuroscience, Göttingen, Germany, Bernstein Focus for Neurotechnology, Göttingen, Germany, Faculty of Physics, University of Göttingen, Göttingen, Germany, Kavli Institute for Theoretical Physics, Santa Barbara, California, United States of America.
Description The dataset comprises all data analyzed in Schottdorf et al. PLoS CB 2015: Ferret (N = 82), dark-reared ferret (N = 21), cat (N = 13), tree shrew (N = 26), galago (N = 9). The code to analyze the data is provided in the supplemental online material of the article. The data is organized into a folder structure. On the highest level, there are folders for species/experiment type. The subfolders, one per OPM, contain the two raw difference images and a region-of-interest, all as tif-files, and a textfile with the number of pixels per mm.
License Creative Commons CC0 1.0 Public Domain Dedication (https://creativecommons.org/publicdomain/zero/1.0/)
References Random Wiring, Ganglion Cell Mosaics, and the Functional Architecture of the Visual Cortex [doi:10.1371/journal.pcbi.1004602] (IsSupplementTo)
Funding DFG, CRC889
DFG, SFB889
BMBF, 01GQ0921
BMBF, 01GQ0922
BMBF, 01GQ1005B
BMBF, 01GQ07113
BMBF, 01GQ0430
BMBF, 01GQ0811
NSF, PHY11-25915
Boehringer Ingelheim Fonds
Keywords Neuroscience
Intrinsic signal imaging
Orientation preference map
Orientation preference
Ferret
Cat
Tree Shrew
Galago
Resource Type Dataset