This repository contains the data and codes for the paper

The precedence effect in spatial hearing manifests in cortical neural population responses

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README.md

ITD_TWF_Behavior_ECoG_Rat

This repository contains the data and codes for the paper

The precedence effect in spatial hearing manifests in cortical neural population responses

For the behavioral experiment, four female Wistar rats were trained to perform a two-alternative forced-choice (2-AFC) near-field lateralization task. The animals initiated a trial by licking a center spout, were presented with an acoustic stimulus over tube phones, and then responded by licking response spouts on the left or right. Correct responses were positively reinforced with drinking water; incorrect responses triggered a short timeout. A trial following the incorrect response is the "correction trial", which would be exculded from the final data analysis.Our temporal weighting funtion (TWF) stimuli consisted of a brief tain of eight binaural pulses presented at a rate of 20, 50, 300 or 900 Hz, with the ITD for each of the pulses drawn independently and uniformly from the range of ± 0.125 ms. We generated two types of such TWF stimuli: In stimuli for “honesty trials”, the ITDs for all 8 pulses were either positive (right ear leading) or negative (left ear leading), and the rat had to respond on the appropriate side to receive a reward. In contrast, in “probe trial” stimuli, the ITDs were unconstrained, there is not a priori correct lateralization, and the animals were free to choose to respond as they pleased and were rewarded regardless.

For the Electrocorticographic (ECoG) experiment, nine female Wistar rats were recorded from left and/or right auditory cortex. The stimuli in ECoG recording were simplier, reducing the number of pulses in the train from 8 to only 4, and by constraining each pulse so that it could take only one of two possible ITD values, either -0.164 ms or +0.164 ms. In total, we recorded electrophysiological responses to this set of sparse TWF stimuli at 12 ECoG electrode placements: 4 placements from the right AC of each of the 4 trained animals in our cohort, and another 3 from the left AC of 3 of the 4 trained animals, plus another 5 recordings from the right AC of an additional five untrained animals which had not been exposed to the TWF stimuli prior to the electrophysiological experiments. At each electrode placement, we recorded responses to our sparse TWF stimuli at two pulse rates: 300 Hz and 900 Hz.

datacite.yml
Title The precedence effect in spatial hearing manifests in cortical neural population responses
Authors Li,Kongyan;Department of Biomedical Sciences and Department of Neuroscience, City University of Hong Kong, Hong Kong SAR, China
Auksztulewicz,Ryszard;Department of Biomedical Sciences and Department of Neuroscience, City University of Hong Kong, Hong Kong SAR, China
Chan,Chloe;Department of Biomedical Sciences and Department of Neuroscience, City University of Hong Kong, Hong Kong SAR, China
Mishra,Ambika;Department of Biomedical Sciences and Department of Neuroscience, City University of Hong Kong, Hong Kong SAR, China
Schnupp,Jan;Department of Biomedical Sciences and Department of Neuroscience, City University of Hong Kong, Hong Kong SAR, China; City University of Hong Kong Shenzhen Research Institute, Shenzhen, China
Description Background: To localize sound sources accurately in a reverberant environment, human binaural hearing strongly favors analyzing the initial wave front of sounds. Behavioral studies of this “precedence effect” have so far largely been confined to human subjects, limiting the scope of complementary physiological approaches. Similarly, physiological studies have mostly looked at neural responses in the inferior colliculus, or used modeling of cochlear mechanics in an attempt to identify likely underlying mechanisms. Studies capable of providing a direct comparison of neural coding and behavioral measures of sound localization under the precedence effect are lacking. Results: We adapted a “temporal weighting function” paradigm for use in laboratory rats. The animals learned to lateralize click trains in which each click in the train had a different interaural time difference. Computing the “perceptual weight” of each click in the train revealed a strong onset bias, very similar to that reported for humans. Follow-on electrocorticographic recording experiments revealed that onset weighting of interaural time differences is a robust feature of the cortical population response, but interestingly it often fails to manifest at individual cortical recording sites. Conclusion: While previous studies suggested that the precedence effect may be caused by cochlear mechanics or inhibitory circuitry in the brainstem and midbrain, our results indicate that the precedence effect is not fully developed at the level of individual recording sites in auditory cortex, but robust and consistent precedence effects are observable at the level of cortical population responses. This indicates that the precedence effect is significantly “higher order” than has hitherto been assumed.
License Creative Commons CC0 1.0 Public Domain Dedication (https://creativecommons.org/publicdomain/zero/1.0/)
References Li K, Auksztulewicz R, Chan CH, Mishra AP, Schnupp JW. The precedence effect in spatial hearing emerges only late in the auditory pathway. bioRxiv. 2021 Jan 1. [doi: https://doi.org/10.1101/2021.07.21.453295] (IsSupplementTo)
Funding Hong Kong Medical Research Fund, 06172296
Hong Kong General Research Fund, 11101020
Shenzhen Science and Innovation Fund, JCYJ20180307124024360
Keywords precedence effect
onset dominance
rat
temporal weighting function
neural decoding
auditory cortex
Resource Type Dataset