Data used for: Kumaraswamy A., Kai K., Ikeno H., Ai H., Wachtler T. (2018) "Adaptations of honeybee auditory interneurons during maturation". In: bioRxiv.

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README.md

Morphological reconstructions and electrophysiological recordings of vibration sensitive honeybee neurons belonging to two maturation levels

This repository contains processed electrophysiology and morphology data used for investigating the honeybee interneuron DL-Int-1 responsive to waggle dance vibration signals.

Reference: Kumaraswamy A., Ai H., Kai K., Ikeno H., Wachtler T. (2019) "Adaptations during maturation in an identified honeybee interneuron responsive to waggle dance vibration signals". In: eNeuro, in Press.

Preprint: Kumaraswamy A., Ai H., Kai K., Ikeno H., Wachtler T. (2018) "Adaptations of honeybee auditory interneurons during maturation". In: bioRxiv. DOI: 10.1101/469502

General Notes

  1. A list of neuron IDs as well as their associated age classification is provided in the file "Metadata_age.xlsx"
  2. Neuron morphology data is stored in SWC format.
  3. Electrophyiology data is stored in NIX format.
  4. The morphology of each DL-Int-1 are represented by multiple SWC files. Each file contains a subregion of DL-Int-1 (see the reference above for description):

    • WN: Whole Arborization
    • MB: Main Branch
    • DB: Dorsal Branch
    • VB: Ventral Branch

Folder Specific Notes

ElectrophysiologyData:

Contains membrane potential and vibration stimulus traces in NIX format. They data in them can be accessed using the library GJEphys (see Usage Guidelines).

MorphologyData/MorphologiesBeforeRegistration

Contains DL-Int-1 morphologies reconstructed from LSM images of single dye filled neurons using Ikeno et al 2018.

MorphologyData/MorphologiesAfterRegistration

Contains DL-Int-1 morphologies after spatial registration using Reg-MaxS-N. Each subfolder contains morphologies using a specific pair of DL-Int-1 morphologies as templates, which is encoded in the name of the folder. A suffix "_xpcScaled" indicates that newly emerged adult morphologies were scaled up by x% before registering them with forager morphologies.

Datacite.yml
Title Morphological reconstructions and electrophysiological recordings of vibration sensitive honeybee neurons belonging to two maturation levels
Authors Kumaraswamy,Ajayrama;Department of Biology II, Ludwig-Maximilians-Universität München, 82152 Planegg-Martinsried, Germany;orcid.org/0000-0001-7928-877X
Ai,Hiroyuki;Department of Earth System Science, Fukuoka University, 814-0180 Fukuoka, Japan;orcid.org/0000-0001-5748-3996
Kazuki,Kai;Department of Biological Sciences, Hokkaido University, 060-0808 Sapporo, Japan;orcid.org/0000-0001-6470-3782
Hidetoshi,Ikeno;School of Human Science and Environment, University of Hyogo, 670-0092 Himeji, Japan;orcid.org/0000-0002-5134-5485
Thomas,Wachtler;Department of Biology II, Ludwig-Maximilians-Universität München, 82152 Planegg-Martinsried, Germany;orcid.org/0000-0003-2015-6590
Description This repository contains processed electrophysiology and morphology data used for investigating adaptations in the vibration sensitive interneuron DL-Int-1 of the honeybee during maturation.
License Creative Commons CC BY 4.0 (https://creativecommons.org/licenses/by/4.0/)
References Kumaraswamy A., Ai H., Kai K., Ikeno H., Wachtler T. (2019). Adaptations during maturation in an identified honeybee interneuron responsive to waggle dance vibration signals. In: eNeuro [doi:10.xxx/zzzz (in press)] (IsPartOf)
Kumaraswamy A., Ai H., Kai K., Ikeno H., Wachtler T. (2018). Adaptations of honeybee auditory interneurons during maturation. In: bioRxiv [doi:10.1101/469502] (IsPartOf)
Funding Ministry of Education, Science, Technology, Sports, and Culture of Japan, Grant No. 22570079, 17K00414 and 18K160345
Japan Science and Technology Agency, Grant No. 15K14569
German Federal Ministry of Education and Research, Grant No. 01GQ1116
Central Research Institute of Fukuoka University, Grant No. 151031
Keywords Neuroscience
Electrophysiology
Morphology
Apis mellifera
waggle dance
Primary mechanosensory center
Dorsal lobe interneurons
Reg-MaxS-N
SIGEN
Maturation
Adaptations
Neo
Nix
OdML
Vaa3d
btmorph_v2
Resource Type Dataset