% NWB parameters common across all animals and recording sessions % Parameters that may change: % dataset projectName = 'Brainwide Infraslow Activity Dynamics'; experimenter = 'Martynas Dervinis'; institution = 'University of Leicester'; publications = {}; lab = 'Michael Okun lab'; dataset = 'neuronexus'; videoFrameRate = 25; % Hz % Find the repository root folder rootFolderName = 'convert2nwbMatNnx'; cfd = mfilename('fullpath'); startInd = strfind(cfd, rootFolderName); rootFolder = cfd(1:startInd+numel(rootFolderName)-1); % Assign data folders if strcmpi(dataset, 'neuronexus') rawDataFolder = [rootFolder filesep 'nnx_raw_derived_data']; % Raw and certain derived Neuronexus data for all animals derivedDataFolder = [rootFolder filesep 'nnx_derived_data']; % Neuroscience Gateway analysis scripts, functions, and downloaded processed Neuronexus data for all animals derivedDataFolderNWB = [rootFolder filesep 'nnx_derived_data_nwb']; % Derived Neuronexus data for all animals placed in NWB format elseif strcmpi(dataset, 'neuropixels') rawDataFolder = [rootFolder filesep 'npx_raw_derived_data']; % Raw and certain derived Neuropixels data for all animals derivedDataFolder = [rootFolder filesep 'npx_derived_data']; % Neuroscience Gateway analysis scripts, functions, and downloaded processed Neuropixels data for all animals derivedDataFolderNWB = [rootFolder filesep 'npx_derived_data_nwb']; % Derived Neuropixels data for all animals placed in NWB format end