jveith 5 месяцев назад
Родитель
Сommit
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1 измененных файлов с 14 добавлено и 0 удалено
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      behavior/README.md

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behavior/README.md

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+### Behavior data
+The `behavior` folder contains pickled dataframe objects with fish trajectories around playback events. (5s before playback, 7s after playback, 120fps).
+- `65fish_nolla.zip` Data on 65 female and male adult _Danionella cerebrum_ without lateral line ablation.
+- `74fish_lla.zip` Data on 74 female and male adult _Danionella cerebrum_ after lateral line ablation.
+
+Load like this (in python):
+```
+import pandas as pd
+df = pd.read_pickle('65fish_nolla.zip')
+```
+To generate paper figures based on this data, see:
+https://github.com/danionella/veith_et_al_2024/tree/main/figures
+
+The subfolder `sleap_model` contains the fish skeleton, parameters, and the trained model that was used to track a single _Danionella cerebrum_ in a 336 x 336 pixel recording, spanning a ~ 11 x 11cm field of view.