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- <notes>Cell: HL23VIP exported from NEURON ModelView. Reference: Yao, H. K.; Guet-McCreight, A.; Mazza, F.; Moradi Chameh, H.; Prevot, T. D.; Griffiths, J. D.; Tripathy, S. J.; Valiante, T. A.; Sibille, E. & Hay, E. Reduced inhibition in depression impairs stimulus processing in human cortical microcircuits Cell Reports, Elsevier, 2022, 38</notes>
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- <member segment="1121"/>
- <member segment="1122"/>
- <member segment="1123"/>
- <member segment="1124"/>
- <member segment="1125"/>
- <member segment="1126"/>
- <member segment="1127"/>
- <member segment="1128"/>
- <member segment="1129"/>
- <member segment="1130"/>
- <member segment="1131"/>
- <member segment="1132"/>
- <member segment="1133"/>
- <member segment="1134"/>
- <member segment="1135"/>
- <member segment="1136"/>
- <member segment="1137"/>
- <member segment="1138"/>
- <member segment="1139"/>
- <member segment="1140"/>
- <member segment="1141"/>
- <member segment="1142"/>
- <member segment="1143"/>
- <member segment="1144"/>
- <member segment="1145"/>
- <member segment="1146"/>
- <member segment="1147"/>
- <member segment="1148"/>
- <member segment="1149"/>
- <member segment="1150"/>
- <member segment="1151"/>
- <member segment="1152"/>
- <member segment="1153"/>
- <member segment="1154"/>
- <member segment="1155"/>
- <member segment="1156"/>
- <member segment="1157"/>
- <member segment="1158"/>
- <member segment="1159"/>
- <member segment="1160"/>
- <member segment="1161"/>
- <member segment="1162"/>
- <member segment="1163"/>
- <member segment="1164"/>
- <member segment="1165"/>
- <member segment="1166"/>
- <member segment="1167"/>
- <member segment="1168"/>
- <member segment="1169"/>
- <member segment="1170"/>
- <member segment="1171"/>
- <member segment="1172"/>
- <member segment="1173"/>
- <member segment="1174"/>
- <member segment="1175"/>
- <member segment="1176"/>
- <member segment="1177"/>
- <member segment="1178"/>
- <member segment="1179"/>
- <member segment="1180"/>
- <member segment="1181"/>
- <member segment="1182"/>
- <member segment="1183"/>
- <member segment="1184"/>
- </segmentGroup>
- <segmentGroup id="soma_group" neuroLexId="GO:0043025">
- <notes>Default soma segment group for the cell</notes>
- <include segmentGroup="soma_0"/>
- </segmentGroup>
- <segmentGroup id="axon_group" neuroLexId="GO:0030424">
- <notes>Default axon segment group for the cell</notes>
- <include segmentGroup="axon_0"/>
- <include segmentGroup="axon_1"/>
- </segmentGroup>
- <segmentGroup id="dendrite_group" neuroLexId="GO:0030425">
- <notes>Default dendrite segment group for the cell</notes>
- <include segmentGroup="dend_0"/>
- <include segmentGroup="dend_1"/>
- <include segmentGroup="dend_2"/>
- <include segmentGroup="dend_3"/>
- <include segmentGroup="dend_4"/>
- <include segmentGroup="dend_5"/>
- <include segmentGroup="dend_6"/>
- <include segmentGroup="dend_7"/>
- <include segmentGroup="dend_8"/>
- <include segmentGroup="dend_9"/>
- <include segmentGroup="dend_10"/>
- <include segmentGroup="dend_11"/>
- <include segmentGroup="dend_12"/>
- <include segmentGroup="dend_13"/>
- <include segmentGroup="dend_14"/>
- <include segmentGroup="dend_15"/>
- <include segmentGroup="dend_16"/>
- <include segmentGroup="dend_17"/>
- <include segmentGroup="dend_18"/>
- <include segmentGroup="dend_19"/>
- <include segmentGroup="dend_20"/>
- <include segmentGroup="dend_21"/>
- <include segmentGroup="dend_22"/>
- <include segmentGroup="dend_23"/>
- <include segmentGroup="dend_24"/>
- <include segmentGroup="dend_25"/>
- <include segmentGroup="dend_26"/>
- <include segmentGroup="dend_27"/>
- <include segmentGroup="dend_28"/>
- <include segmentGroup="dend_29"/>
- <include segmentGroup="dend_30"/>
- <include segmentGroup="dend_31"/>
- <include segmentGroup="dend_32"/>
- <include segmentGroup="dend_33"/>
- <include segmentGroup="dend_34"/>
- <include segmentGroup="dend_35"/>
- <include segmentGroup="dend_36"/>
- <include segmentGroup="dend_37"/>
- <include segmentGroup="dend_38"/>
- <include segmentGroup="dend_39"/>
- <include segmentGroup="dend_40"/>
- <include segmentGroup="dend_41"/>
- <include segmentGroup="dend_42"/>
- <include segmentGroup="dend_43"/>
- <include segmentGroup="dend_44"/>
- <include segmentGroup="dend_45"/>
- <include segmentGroup="dend_46"/>
- <include segmentGroup="dend_47"/>
- <include segmentGroup="dend_48"/>
- <include segmentGroup="dend_49"/>
- <include segmentGroup="dend_50"/>
- <include segmentGroup="dend_51"/>
- <include segmentGroup="dend_52"/>
- </segmentGroup>
- <segmentGroup id="all">
- <include segmentGroup="axon_0"/>
- <include segmentGroup="axon_1"/>
- <include segmentGroup="dend_0"/>
- <include segmentGroup="dend_1"/>
- <include segmentGroup="dend_2"/>
- <include segmentGroup="dend_3"/>
- <include segmentGroup="dend_4"/>
- <include segmentGroup="dend_5"/>
- <include segmentGroup="dend_6"/>
- <include segmentGroup="dend_7"/>
- <include segmentGroup="dend_8"/>
- <include segmentGroup="dend_9"/>
- <include segmentGroup="dend_10"/>
- <include segmentGroup="dend_11"/>
- <include segmentGroup="dend_12"/>
- <include segmentGroup="dend_13"/>
- <include segmentGroup="dend_14"/>
- <include segmentGroup="dend_15"/>
- <include segmentGroup="dend_16"/>
- <include segmentGroup="dend_17"/>
- <include segmentGroup="dend_18"/>
- <include segmentGroup="dend_19"/>
- <include segmentGroup="dend_20"/>
- <include segmentGroup="dend_21"/>
- <include segmentGroup="dend_22"/>
- <include segmentGroup="dend_23"/>
- <include segmentGroup="dend_24"/>
- <include segmentGroup="dend_25"/>
- <include segmentGroup="dend_26"/>
- <include segmentGroup="dend_27"/>
- <include segmentGroup="dend_28"/>
- <include segmentGroup="dend_29"/>
- <include segmentGroup="dend_30"/>
- <include segmentGroup="dend_31"/>
- <include segmentGroup="dend_32"/>
- <include segmentGroup="dend_33"/>
- <include segmentGroup="dend_34"/>
- <include segmentGroup="dend_35"/>
- <include segmentGroup="dend_36"/>
- <include segmentGroup="dend_37"/>
- <include segmentGroup="dend_38"/>
- <include segmentGroup="dend_39"/>
- <include segmentGroup="dend_40"/>
- <include segmentGroup="dend_41"/>
- <include segmentGroup="dend_42"/>
- <include segmentGroup="dend_43"/>
- <include segmentGroup="dend_44"/>
- <include segmentGroup="dend_45"/>
- <include segmentGroup="dend_46"/>
- <include segmentGroup="dend_47"/>
- <include segmentGroup="dend_48"/>
- <include segmentGroup="dend_49"/>
- <include segmentGroup="dend_50"/>
- <include segmentGroup="dend_51"/>
- <include segmentGroup="dend_52"/>
- <include segmentGroup="soma_0"/>
- </segmentGroup>
- </morphology>
- <biophysicalProperties id="biophys">
- <membraneProperties>
- <channelDensity id="pas" ionChannel="pas" condDensity="2.5756438955642182e-05 S_per_cm2" erev="-79.74132024971513 mV" ion="non_specific"/>
- <channelDensity id="Ih" ionChannel="Ih" condDensity="4.274951616063423e-05 S_per_cm2" erev="-45 mV" ion="hcn"/>
- <channelDensity id="NaTg_somatic" ionChannel="NaTg_VIP_somatic" condDensity="0.11491205828369114 S_per_cm2" erev="50 mV" segmentGroup="soma_group" ion="na"/>
- <channelDensity id="Nap_somatic" ionChannel="Nap" condDensity="0.0001895305240694194 S_per_cm2" erev="50 mV" segmentGroup="soma_group" ion="na"/>
- <channelDensity id="K_P_somatic" ionChannel="K_P" condDensity="0.0009925418924114282 S_per_cm2" erev="-85 mV" segmentGroup="soma_group" ion="k"/>
- <channelDensity id="K_T_somatic" ionChannel="K_T" condDensity="0.009051981253674193 S_per_cm2" erev="-85 mV" segmentGroup="soma_group" ion="k"/>
- <channelDensity id="Kv3_1_somatic" ionChannel="Kv3_1" condDensity="0.31215653649208114 S_per_cm2" erev="-85 mV" segmentGroup="soma_group" ion="k"/>
- <channelDensity id="Im_somatic" ionChannel="Im" condDensity="0.0003679378262289559 S_per_cm2" erev="-85 mV" segmentGroup="soma_group" ion="k"/>
- <channelDensity id="SK_somatic" ionChannel="SK" condDensity="0.1655502166633749 S_per_cm2" erev="-85 mV" segmentGroup="soma_group" ion="k"/>
- <channelDensity id="NaTg_axonal" ionChannel="NaTg_VIP_axonal" condDensity="0.20112200814143477 S_per_cm2" erev="50 mV" segmentGroup="axon_group" ion="na"/>
- <channelDensity id="Nap_axonal" ionChannel="Nap" condDensity="0.0006248906854665301 S_per_cm2" erev="50 mV" segmentGroup="axon_group" ion="na"/>
- <channelDensity id="K_P_axonal" ionChannel="K_P" condDensity="0.26489876414660096 S_per_cm2" erev="-85 mV" segmentGroup="axon_group" ion="k"/>
- <channelDensity id="K_T_axonal" ionChannel="K_T" condDensity="0.014364427062274185 S_per_cm2" erev="-85 mV" segmentGroup="axon_group" ion="k"/>
- <channelDensity id="Kv3_1_axonal" ionChannel="Kv3_1" condDensity="0.0011201608191112877 S_per_cm2" erev="-85 mV" segmentGroup="axon_group" ion="k"/>
- <channelDensity id="Im_axonal" ionChannel="Im" condDensity="0.00013891465461042372 S_per_cm2" erev="-85 mV" segmentGroup="axon_group" ion="k"/>
- <channelDensity id="SK_axonal" ionChannel="SK" condDensity="0.7027792087501376 S_per_cm2" erev="-85 mV" segmentGroup="axon_group" ion="k"/>
- <channelDensityNernst id="Ca_HVA_somatic" ionChannel="Ca_HVA" condDensity="4.384846294634834e-05 S_per_cm2" segmentGroup="soma_group" ion="ca"/>
- <channelDensityNernst id="Ca_LVA_somatic" ionChannel="Ca_LVA" condDensity="0.0034472458995879864 S_per_cm2" segmentGroup="soma_group" ion="ca"/>
- <channelDensityNernst id="Ca_HVA_axonal" ionChannel="Ca_HVA" condDensity="2.819397237794038e-05 S_per_cm2" segmentGroup="axon_group" ion="ca"/>
- <channelDensityNernst id="Ca_LVA_axonal" ionChannel="Ca_LVA" condDensity="0.010354001513952075 S_per_cm2" segmentGroup="axon_group" ion="ca"/>
- <specificCapacitance value="2 uF_per_cm2"/>
- <initMembPotential value="-80mV"/>
- </membraneProperties>
- <intracellularProperties>
- <species id="ca" concentrationModel="CaDynamics_E2_NML2_VIP_somatic" ion="ca" initialConcentration="1e-4 mM" initialExtConcentration="2.0E-6 mol_per_cm3" segmentGroup="soma_group"/>
- <species id="ca" concentrationModel="CaDynamics_E2_NML2_VIP_axonal" ion="ca" initialConcentration="1e-4 mM" initialExtConcentration="2.0E-6 mol_per_cm3" segmentGroup="axon_group"/>
- <resistivity value="0.1 kohm_cm"/>
- </intracellularProperties>
- </biophysicalProperties>
- </cell>
- </neuroml>
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