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- <neuroml xmlns="http://www.neuroml.org/schema/neuroml2" xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://www.neuroml.org/schema/neuroml2 https://raw.github.com/NeuroML/NeuroML2/development/Schemas/NeuroML2/NeuroML_v2.3.1.xsd" id="NeuroML2_file_exported_from_NEURON">
- <notes> NeuroML 2 file generated from ModelView by: NEURON -- VERSION 8.2.2 release/8.2 (93d41fafd) 2022-12-15
- Authors: Michael Hines, Sushil Kambampati and Padraig Gleeson,
- Yale University and UCL
- </notes>
- <include href="CaDynamics_E2_NML2.nml"/>
- <include href="channels/pas.channel.nml"/>
- <cell id="HL23PYR">
- <notes>Cell: HL23PYR exported from NEURON ModelView. Reference: Yao, H. K.; Guet-McCreight, A.; Mazza, F.; Moradi Chameh, H.; Prevot, T. D.; Griffiths, J. D.; Tripathy, S. J.; Valiante, T. A.; Sibille, E. & Hay, E. Reduced inhibition in depression impairs stimulus processing in human cortical microcircuits Cell Reports, Elsevier, 2022, 38</notes>
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- <include segmentGroup="apic_8"/>
- <include segmentGroup="apic_9"/>
- <include segmentGroup="apic_10"/>
- <include segmentGroup="apic_11"/>
- <include segmentGroup="apic_12"/>
- <include segmentGroup="apic_13"/>
- <include segmentGroup="apic_14"/>
- <include segmentGroup="apic_15"/>
- <include segmentGroup="apic_16"/>
- <include segmentGroup="apic_17"/>
- <include segmentGroup="apic_18"/>
- <include segmentGroup="apic_19"/>
- <include segmentGroup="apic_20"/>
- <include segmentGroup="apic_21"/>
- <include segmentGroup="apic_22"/>
- <include segmentGroup="apic_23"/>
- <include segmentGroup="apic_24"/>
- <include segmentGroup="apic_25"/>
- <include segmentGroup="apic_26"/>
- <include segmentGroup="apic_27"/>
- <include segmentGroup="apic_28"/>
- <include segmentGroup="apic_29"/>
- <include segmentGroup="apic_30"/>
- <include segmentGroup="apic_31"/>
- <include segmentGroup="apic_32"/>
- <include segmentGroup="apic_33"/>
- <include segmentGroup="apic_34"/>
- <include segmentGroup="apic_35"/>
- <include segmentGroup="apic_36"/>
- <include segmentGroup="apic_37"/>
- <include segmentGroup="apic_38"/>
- <include segmentGroup="apic_39"/>
- <include segmentGroup="apic_40"/>
- <include segmentGroup="apic_41"/>
- <include segmentGroup="apic_42"/>
- <include segmentGroup="apic_43"/>
- <include segmentGroup="apic_44"/>
- <include segmentGroup="apic_45"/>
- <include segmentGroup="apic_46"/>
- <include segmentGroup="apic_47"/>
- <include segmentGroup="apic_48"/>
- <include segmentGroup="apic_49"/>
- <include segmentGroup="apic_50"/>
- <include segmentGroup="apic_51"/>
- <include segmentGroup="apic_52"/>
- <include segmentGroup="apic_53"/>
- <include segmentGroup="apic_54"/>
- <include segmentGroup="apic_55"/>
- <include segmentGroup="apic_56"/>
- <include segmentGroup="apic_57"/>
- <include segmentGroup="axon_0"/>
- <include segmentGroup="axon_1"/>
- <include segmentGroup="dend_0"/>
- <include segmentGroup="dend_1"/>
- <include segmentGroup="dend_2"/>
- <include segmentGroup="dend_3"/>
- <include segmentGroup="dend_4"/>
- <include segmentGroup="dend_5"/>
- <include segmentGroup="dend_6"/>
- <include segmentGroup="dend_7"/>
- <include segmentGroup="dend_8"/>
- <include segmentGroup="dend_9"/>
- <include segmentGroup="dend_10"/>
- <include segmentGroup="dend_11"/>
- <include segmentGroup="dend_12"/>
- <include segmentGroup="dend_13"/>
- <include segmentGroup="dend_14"/>
- <include segmentGroup="dend_15"/>
- <include segmentGroup="dend_16"/>
- <include segmentGroup="dend_17"/>
- <include segmentGroup="dend_18"/>
- <include segmentGroup="dend_19"/>
- <include segmentGroup="dend_20"/>
- <include segmentGroup="dend_21"/>
- <include segmentGroup="dend_22"/>
- <include segmentGroup="dend_23"/>
- <include segmentGroup="dend_24"/>
- <include segmentGroup="dend_25"/>
- <include segmentGroup="dend_26"/>
- <include segmentGroup="dend_27"/>
- <include segmentGroup="dend_28"/>
- <include segmentGroup="dend_29"/>
- <include segmentGroup="myelin_0"/>
- <include segmentGroup="soma_0"/>
- </segmentGroup>
- </morphology>
- <biophysicalProperties id="biophys">
- <membraneProperties>
- <channelDensity id="pas" ionChannel="pas" condDensity="0.0000954 S_per_cm2" erev="-80 mV" segmentGroup="all_minus_myelin" ion="non_specific"/>
- <spikeThresh value="10mV"/>
- <specificCapacitance value="1 uF_per_cm2" segmentGroup="all_minus_myelin"/>
- <specificCapacitance value="0.02 uF_per_cm2" segmentGroup="myelin_group"/>
- <initMembPotential value="-80mV"/>
- </membraneProperties>
- <intracellularProperties>
- <resistivity value="0.1 kohm_cm" segmentGroup="all_minus_myelin"/>
- <resistivity value="0.1 kohm_cm" segmentGroup="myelin_group"/>
- </intracellularProperties>
- </biophysicalProperties>
- </cell>
- </neuroml>
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