Human-L2-3-Cortical-Microcircuit/L23Net/models/biophys_HL23PYR.hoc

proc biophys_HL23PYR(){
	//$o1.delete_axon(3,1.75,1,1)
	forsec $o1.all {
			insert pas
			Ra = 100
			cm = 1
			e_pas = -80
			g_pas = 0.0000954
			insert Ih
		}
		forsec $o1.somatic {
			insert SK
			insert CaDynamics
			insert Ca_LVA
			insert Ca_HVA
			insert K_T
			insert K_P
			insert Kv3_1
			insert NaTg
			insert Im
			ek = -85
			ena = 50
			gamma_CaDynamics = 0.0005
			vshiftm_NaTg = 13
			vshifth_NaTg = 15
			slopem_NaTg = 7
			gbar_Ih = 0.000148
		}

		forsec $o1.apical {
			cm = 2
		}
		forsec $o1.basal {
			cm = 2
			gbar_Ih = 0.000000709
		}
		$o1.distribute_channels("apic","gbar_Ih",2,-0.8696,3.6161,0.0,2.0870,$o1.soma.gbar_Ih)

		forsec $o1.axonal {
			insert SK
			insert Ca_LVA
			insert Ca_HVA
			insert K_T
			insert K_P
			insert Nap
			insert Kv3_1
			insert NaTg
			insert CaDynamics
			insert Im
			ek = -85
			ena = 50
			vshifth_NaTg = 10
			slopem_NaTg = 9
			gamma_CaDynamics = 0.0005
		}

		$o1.distribute_channels("axon","decay_CaDynamics",0,1.000000,0.000000,0.000000,0.000000,226.0000000000)
		$o1.distribute_channels("axon","gbar_SK",0,1.000000,0.000000,0.000000,0.000000,0.0145000000)
		$o1.distribute_channels("axon","gbar_Ca_LVA",0,1.000000,0.000000,0.000000,0.000000,0.0439000000)
		$o1.distribute_channels("axon","gbar_Ca_HVA",0,1.000000,0.000000,0.000000,0.000000,0.0003060000)
		$o1.distribute_channels("axon","gbar_Kv3_1",0,1.000000,0.000000,0.000000,0.000000,0.9410000000)
		$o1.distribute_channels("axon","gbar_K_T",0,1.000000,0.000000,0.000000,0.000000,0.0424000000)
		$o1.distribute_channels("axon","gbar_K_P",0,1.000000,0.000000,0.000000,0.000000,0.3380000000)
		$o1.distribute_channels("axon","gbar_Nap",0,1.000000,0.000000,0.000000,0.000000,0.0084200000)
		$o1.distribute_channels("axon","gbar_NaTg",0,1.000000,0.000000,0.000000,0.000000,1.3800000000)
		$o1.distribute_channels("axon","gbar_Im",0,1.000000,0.000000,0.000000,0.000000,0.0000000000)
		$o1.distribute_channels("soma","decay_CaDynamics",0,1.000000,0.000000,0.000000,0.000000,20.0000000000)
		$o1.distribute_channels("soma","gbar_Im",0,1.000000,0.000000,0.000000,0.000000,0.0003060000)
		$o1.distribute_channels("soma","gbar_Ca_LVA",0,1.000000,0.000000,0.000000,0.000000,0.0029600000)
		$o1.distribute_channels("soma","gbar_Ca_HVA",0,1.000000,0.000000,0.000000,0.000000,0.0015500000)
		$o1.distribute_channels("soma","gbar_Kv3_1",0,1.000000,0.000000,0.000000,0.000000,0.0424000000)
		$o1.distribute_channels("soma","gbar_SK",0,1.000000,0.000000,0.000000,0.000000,0.0008530000)
		$o1.distribute_channels("soma","gbar_K_T",0,1.000000,0.000000,0.000000,0.000000,0.0605000000)
		$o1.distribute_channels("soma","gbar_K_P",0,1.000000,0.000000,0.000000,0.000000,0.0002080000)
		$o1.distribute_channels("soma","gbar_NaTg",0,1.000000,0.000000,0.000000,0.000000,0.2720000000)
		$o1.myelin{
			Ra = 100
			cm = 0.02
		}
}