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- # Most of these parameters are part of the work by Aynur Makhsutov
- # during AMGEN program 2016 at Wachtlerlab, LMU. The last few parameters sets
- # that start with "DLInt" have been newly added.
- from brian2 import nA, mV, ms, nS, pF, nF, uA, uF
- resonator = {
- "b": 0.0805 * nA,
- "V":-70.4*mV,
- "sF": 2 * mV,
- "tau": 144 * ms,
- "EL": -70.6 * mV,
- "gL": 20 * nS,
- "C": 2810 * pF,
- "a": 8 * nS
- }
- integrator = {
- "b": 0.0805 * nA,
- "V":-70.4*mV,
- "sF": 2 * mV,
- "tau": 144 * ms,
- "EL": -70.6 * mV,
- "gL": 20 * nS,
- "C": 12 * nF,
- "a": 4 * nS
- }
- rebound = {
- "w": 0 * uA,
- "Vr": -60 * mV, # -48.5*mV,
- "Vt": -50.4 * mV,
- "b": 0.0805 * nA,
- "V": -60 * mV,
- "sF": 2 * mV,
- "tau": 720 * ms,
- "EL": -60 * mV,
- "gL": 30 * nS,
- "C": 281 * pF,
- "a": 80 * nS
- }
- bursting = {
- "w": 0 * uA,
- "Vr": -47.4 * mV,
- "Vt": -50.4 * mV,
- "b": 0.0805 * nA,
- "V": -70.4 * mV,
- "sF": 2 * mV,
- "tau": 144 * ms,
- "EL": -70.6 * mV,
- "gL": 30 * nS,
- "C": 281 * pF,
- "a": 4 * nS
- }
- bursting_rebound = {
- "w": 0 * uA,
- "Vr": -47.4 * mV,
- "Vt": -50.4 * mV,
- "b": 0.0805 * nA,
- "V": -60 * mV,
- "sF": 2 * mV,
- "tau": 720 * ms,
- "EL": -60 * mV,
- "gL": 30 * nS,
- "C": 281 * pF,
- "a": 80 * nS
- }
- bursting_rebound_low = {
- "w": 0 * uA,
- "Vr": -47.4 * mV,
- "Vt": -50.4 * mV,
- "b": 0.0805 * nA,
- "V": -60 * mV,
- "sF": 2 * mV,
- "tau": 720 * ms,
- "EL": -60 * mV,
- "gL": 30 * nS,
- "C": 281 * pF,
- "a": 30 * nS
- }
- bursting_rebound_high = {
- "w": 0 * uA,
- "Vr": -47.4 * mV,
- "Vt": -50.4 * mV,
- "b": 0.0805 * nA,
- "V": -60 * mV,
- "sF": 2 * mV,
- "tau": 720 * ms,
- "EL": -60 * mV,
- "gL": 30 * nS,
- "C": 281 * pF,
- "a": 150 * nS
- }
- perc = {
- "Vr": 0.1,
- "Vt": 0.1,
- "b": 0.99,
- "sF": 0.2,
- "tau": 0.6,
- "gL": 0.01,
- "C": 0.2,
- "a": 0.4
- }
- hopf_resonator = {
- "w": 0 * uA,
- "Vr": -47.4 * mV,
- "Vt": -50.4 * mV,
- "b": 0.0805 * nA,
- "V": -60 * mV,
- "sF": 2 * mV,
- "tau": 120 * ms,
- "EL": -60 * mV,
- "gL": 30 * nS,
- "C": 681 * pF,
- "a": 80 * nS
- }
- hopf_resonator2 = {
- "w": 0 * uA,
- "Vr": -47.4 * mV,
- "Vt": -50.4 * mV,
- "b": 0.0805 * nA,
- "V": -60 * mV,
- "sF": 2 * mV,
- "tau": 120 * ms,
- "EL": -60 * mV,
- "gL": 6 * nS,
- "C": 1200 * pF,
- "a": 80 * nS
- }
- saddle_resonator = {
- "w": 0 * uA,
- "Vr": -47.4 * mV,
- "Vt": -50.4 * mV,
- "b": 0.0805 * nA,
- "V": -60 * mV,
- "sF": 2 * mV,
- "tau": 12 * ms,
- "EL": -60 * mV,
- "gL": 30 * nS,
- "C": 800 * pF,
- "a": 30 * nS
- }
- saddle_resonator2 = {
- "w": 0 * uA,
- "Vr": -47.4 * mV,
- "Vt": -50.4 * mV,
- "b": 0.0805 * nA,
- "V": -60 * mV,
- "sF": 2 * mV,
- "tau": 12 * ms,
- "EL": -60 * mV,
- "gL": 3 * nS,
- "C": 800 * pF,
- "a": 30 * nS
- }
- saddle_integrator = {
- "w": 0 * uA,
- "Vr": -47.4 * mV,
- "Vt": -50.4 * mV,
- "b": 0.0805 * nA,
- "V": -60 * mV,
- "sF": 2 * mV,
- "tau": 12 * ms,
- "EL": -60 * mV,
- "gL": 40 * nS,
- "C": 1200 * pF,
- "a": 3 * nS
- }
- saddle_mixed = {
- "w": 0 * uA,
- "Vr": -47.4 * mV,
- "Vt": -50.4 * mV,
- "b": 0.0805 * nA,
- "V": -60 * mV,
- "sF": 2 * mV,
- "tau": 12 * ms,
- "EL": -60 * mV,
- "gL": 80 * nS,
- "C": 300 * pF,
- "a": 10 * nS
- }
- result13 = {
- "w": 0 * uA,
- "Vr": -62.8 * mV,
- "Vt": -49.2 * mV,
- "b": 1.41 * nA,
- "V": -60 * mV,
- "sF": 7.2 * mV,
- "tau": 600 * ms,
- "EL": -60 * mV,
- "gL": 80 * nS,
- "C": 276 * pF,
- "a": 1037 * nS
- }
- mean_24_08_2016 = {
- "w": 0 * uA,
- "Vr": -55.56 * mV,
- "Vt": -49.82 * mV,
- "b": 1.85 * nA,
- "V": -60 * mV,
- "sF": 6.69 * mV,
- "tau": 617.8 * ms,
- "EL": -60 * mV,
- "gL": 411.7 * nS,
- "C": 5242.8 * pF,
- "a": 923 * nS
- }
- std_inits = {
- "w": 0*uA,
- "Vr": -70.6 * mV,#-48.5*mV,
- "Vt": -50.4 * mV,
- "b": 0.0805 * nA,
- "V":-70.4 * mV,
- "sF": 2 * mV,
- "tau": 144 * ms,
- "EL": -70.6 * mV,
- "gL": 30 * nS,
- "C": 281 * pF,
- "a": 4 * nS,
- "Vp": -25 * mV,
- "I": 0 * nA
- }
- DLInt2Try1 = {
- "b": 0.0805 * nA,
- "V": -30*mV,
- "sF": 2 * mV,
- "tau": 5 * ms,
- "EL": -30 * mV,
- "gL": 200000 * nS,
- "C": 0.5 * uF,
- "a": 4 * nS,
- "Vr": -30 * mV,
- "Vt": -20 * mV,
- "Vp": -10 * mV
- }
- DLInt1Try1 = {
- "b": 0.0805 * nA,
- "V": -30*mV,
- "sF": 2 * mV,
- "tau": 1 * ms,
- "EL": -30 * mV,
- "gL": 200000 * nS,
- "C": 0.5 * uF,
- "a": 200000 * nS,
- "Vr": -30 * mV,
- "Vt": -15 * mV,
- "Vp": -5 * mV
- }
- DLInt1Try2 = {
- "b": 1.367 * nA,
- "V": -30*mV,
- "sF": 6 * mV,
- "tau": 100 * ms,
- "EL": -30 * mV,
- "gL": 200000 * nS,
- "C": 0.5 * uF,
- "a": 400000 * nS,
- "Vr": -30 * mV,
- "Vt": -25 * mV,
- "Vp": 0 * mV
- }
- DLInt1Aynur = {
- "b": 1 * nA,
- "V": -30 * mV,
- "sF": 6 * mV,
- "tau": 180 * ms,
- "EL": -30 * mV,
- "gL": 500 * nS,
- "C": 0.125 * nF,
- "a": 500 * nS,
- "Vr": -31 * mV,
- "Vt": -27.5 * mV,
- "Vp": 0 * mV
- }
- DLInt2Try2 = {
- "b": 1 * nA,
- "V": -30 * mV,
- "sF": 6 * mV,
- "tau": 0.08 * ms,
- "EL": -30 * mV,
- "gL": 500 * nS,
- "C": 0.125 * nF,
- "a": 500 * nS,
- "Vr": -31 * mV,
- "Vt": -27.5 * mV,
- "Vp": 0 * mV
- }
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