# relative or absolute location of the YML file defining movement correction pipes
movement_correction_pipes: ../movement_correction_pipes.yml

# relative or absolute location of the YML file defining compoenent segmentation pipes
component_segmentation_pipes: ../component_segmentation_pipes.yml

# pipeline definitions using the names of pipes defined in the YML files above

pipeline1: # arbitrary but unique name
  shift_correction: none_none
  motion_correction: none_none
  component_segmentation: cnmf_defaults

pipeline2: # arbitrary but unique name
  shift_correction: normcorre_none_defaults
  motion_correction: none_none
  component_segmentation: cnmf_defaults

pipeline3: # arbitrary but unique name
  shift_correction: none_none
  motion_correction: normcorre_none_defaults
  component_segmentation: cnmf_defaults

pipeline4: # arbitrary but unique name
  shift_correction: normcorre_none_defaults
  motion_correction: normcorre_none_defaults
  component_segmentation: cnmf_defaults

pipeline5: # arbitrary but unique name
  shift_correction: normcorre_none_defaults
  motion_correction: normcorre_normcorre_defaults
  component_segmentation: cnmf_defaults

pipeline5a: # arbitrary but unique name
  shift_correction: normcorre_none_defaults
  motion_correction: normcorre_normcorre_antennal_data
  component_segmentation: cnmf_defaults

pipeline1_custom_cnmf: # arbitrary but unique name
  shift_correction: none_none
  motion_correction: none_none
  component_segmentation: cnmf_antennal_data

pipeline2_custom_cnmf: # arbitrary but unique name
  shift_correction: normcorre_none_defaults
  motion_correction: none_none
  component_segmentation: cnmf_antennal_data

pipeline4_custom_cnmf: # arbitrary but unique name
  shift_correction: normcorre_none_defaults
  motion_correction: normcorre_none_defaults
  component_segmentation: cnmf_antennal_data

pipeline5_custom_cnmf: # arbitrary but unique name
  shift_correction: normcorre_none_defaults
  motion_correction: normcorre_normcorre_defaults
  component_segmentation: cnmf_antennal_data

pipeline5a_custom_cnmf: # arbitrary but unique name
  shift_correction: normcorre_none_defaults
  motion_correction: normcorre_normcorre_antennal_data
  component_segmentation: cnmf_antennal_data

pipeline2_custom_cnmf_1: # arbitrary but unique name
  shift_correction: normcorre_none_defaults
  motion_correction: none_none
  component_segmentation: cnmf_antennal_data_gnb2

pipeline2_custom_cnmf_2: # arbitrary but unique name
  shift_correction: normcorre_none_defaults
  motion_correction: none_none
  component_segmentation: cnmf_antennal_data_p0

pipeline2_custom_cnmf_3: # arbitrary but unique name
  shift_correction: normcorre_none_defaults
  motion_correction: none_none
  component_segmentation: cnmf_antennal_data_gnb2_p0

pipeline2_rnmf_defaults:
  shift_correction: normcorre_none_defaults
  motion_correction: none_none
  component_segmentation: rnmf_defaults

pipeline2_rnmf_maxCount_50:
  shift_correction: normcorre_none_defaults
  motion_correction: none_none
  component_segmentation: rnmf_maxCount_50