aomic-fc/code/junifer_jobs/PREPROCESS_ID1000/run_PREPROCESS_ID1000.submit

# The environment
universe = vanilla
getenv = True

# Resources
request_cpus = 1
request_memory = 8G
request_disk = 1G

# Executable
initial_dir = /data/project/identification_prediction/data/aomic-fc_junifer-release/code/junifer_jobs/PREPROCESS_ID1000
executable = $(initial_dir)/run_conda.sh
transfer_executable = False

arguments = junifer_release junifer run /data/project/identification_prediction/data/aomic-fc_junifer-release/code/junifer_jobs/PREPROCESS_ID1000/config.yaml --verbose info --element $(element)



# Logs
log = /data/project/identification_prediction/data/aomic-fc_junifer-release/code/junifer_jobs/PREPROCESS_ID1000/logs/junifer_run_$(log_element).log
output = /data/project/identification_prediction/data/aomic-fc_junifer-release/code/junifer_jobs/PREPROCESS_ID1000/logs/junifer_run_$(log_element).out
error = /data/project/identification_prediction/data/aomic-fc_junifer-release/code/junifer_jobs/PREPROCESS_ID1000/logs/junifer_run_$(log_element).err
queue