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PREPROCESS_ID1000
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junifer_run_0144.out

junifer_run_0144.out 3.8 KB
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  1. Activating junifer_release
    2. 

  2. Running junifer run /data/project/identification_prediction/data/aomic-fc_junifer-release/code/junifer_jobs/PREPROCESS_ID1000/config.yaml --verbose info --element 0144 in virtual environment
    3. 

  3. 2023-02-08 07:10:35,933 - JUNIFER - INFO - ===== Lib Versions =====
    4. 

  4. 2023-02-08 07:10:35,933 - JUNIFER - INFO - numpy: 1.23.5
    5. 

  5. 2023-02-08 07:10:35,933 - JUNIFER - INFO - scipy: 1.10.0rc1
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  6. 2023-02-08 07:10:35,933 - JUNIFER - INFO - pandas: 1.5.2
    7. 

  7. 2023-02-08 07:10:35,933 - JUNIFER - INFO - nilearn: 0.9.2
    8. 

  8. 2023-02-08 07:10:35,933 - JUNIFER - INFO - nibabel: 4.0.2
    9. 

  9. 2023-02-08 07:10:35,933 - JUNIFER - INFO - junifer: 0.0.2.dev94
    10. 

  10. 2023-02-08 07:10:35,933 - JUNIFER - INFO - ========================
    11. 

  11. 2023-02-08 07:10:35,933 - JUNIFER - INFO - Parsing yaml file: /data/project/identification_prediction/data/aomic-fc_junifer-release/code/junifer_jobs/PREPROCESS_ID1000/config.yaml
    12. 

  12. ================================================================================
    13. 

  13. REGISTERING MY OWN PARCELLATION
    14. 

  14. 2023-02-08 07:10:35,946 - JUNIFER - INFO - Fetching one of Schaefer parcellations.
    15. 

  15. 2023-02-08 07:10:35,946 - JUNIFER - INFO - Parcellation parameters:
    16. 

  16. 2023-02-08 07:10:35,946 - JUNIFER - INFO - 	n_rois: 100
    17. 

  17. 2023-02-08 07:10:35,946 - JUNIFER - INFO - 	yeo_networks: 17
    18. 

  18. 2023-02-08 07:10:35,946 - JUNIFER - INFO - 	resolution: 2
    19. 

  19. 2023-02-08 07:10:35,948 - JUNIFER - INFO - Loading parcellation /home/lsasse/junifer/data/parcellations/schaefer_2018/Schaefer2018_100Parcels_17Networks_order_FSLMNI152_2mm.nii.gz
    20. 

  20. 2023-02-08 07:10:36,000 - JUNIFER - INFO - Fetching one of Schaefer parcellations.
    21. 

  21. 2023-02-08 07:10:36,000 - JUNIFER - INFO - Parcellation parameters:
    22. 

  22. 2023-02-08 07:10:36,000 - JUNIFER - INFO - 	n_rois: 200
    23. 

  23. 2023-02-08 07:10:36,000 - JUNIFER - INFO - 	yeo_networks: 17
    24. 

  24. 2023-02-08 07:10:36,000 - JUNIFER - INFO - 	resolution: 2
    25. 

  25. 2023-02-08 07:10:36,002 - JUNIFER - INFO - Loading parcellation /home/lsasse/junifer/data/parcellations/schaefer_2018/Schaefer2018_200Parcels_17Networks_order_FSLMNI152_2mm.nii.gz
    26. 

  26. 2023-02-08 07:10:36,055 - JUNIFER - INFO - Fetching one of Schaefer parcellations.
    27. 

  27. 2023-02-08 07:10:36,055 - JUNIFER - INFO - Parcellation parameters:
    28. 

  28. 2023-02-08 07:10:36,055 - JUNIFER - INFO - 	n_rois: 400
    29. 

  29. 2023-02-08 07:10:36,055 - JUNIFER - INFO - 	yeo_networks: 17
    30. 

  30. 2023-02-08 07:10:36,055 - JUNIFER - INFO - 	resolution: 2
    31. 

  31. 2023-02-08 07:10:36,057 - JUNIFER - INFO - Loading parcellation /home/lsasse/junifer/data/parcellations/schaefer_2018/Schaefer2018_400Parcels_17Networks_order_FSLMNI152_2mm.nii.gz
    32. 

  32. ================================================================================
    33. 

  33. 2023-02-08 07:10:36,107 - JUNIFER - INFO - Registering SmoothedFC in marker
    34. 

  34. 2023-02-08 07:10:36,107 - JUNIFER - WARNING - `datadir` is None, creating a temporary directory
    35. 

  35. 2023-02-08 07:10:36,107 - JUNIFER - INFO - `datadir` set to /var/lib/condor/execute/dir_1247459/tmp12wpe9bl
    36. 

  36. ================================================================================
    37. 

  37. 6
    38. 

  38. ================================================================================
    39. 

  39. 2023-02-08 07:10:36,107 - JUNIFER - INFO - FWHM IS 6
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  40. ================================================================================
    41. 

  41. 6
    42. 

  42. ================================================================================
    43. 

  43. 2023-02-08 07:10:36,107 - JUNIFER - INFO - FWHM IS 6
    44. 

  44. ================================================================================
    45. 

  45. 6
    46. 

  46. ================================================================================
    47. 

  47. 2023-02-08 07:10:36,107 - JUNIFER - INFO - FWHM IS 6
    48. 

  48. 2023-02-08 07:13:00,294 - JUNIFER - INFO - Getting element 0144
    49. 

  49. 2023-02-08 07:13:00,295 - JUNIFER - ERROR - Cannot access BOLD for {'subject': '0144'}: File /var/lib/condor/execute/dir_1247459/tmp12wpe9bl/derivatives/fmriprep/sub-0144/func/sub-0144_task-moviewatching_space-MNI152NLin2009cAsym_desc-preproc_bold.nii.gz does not exist
    50.