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junifer_collect.out

junifer_collect.out 2.8 KB
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  1. Activating junifer_release
    2. 

  2. Running junifer collect /data/project/identification_prediction/data/aomic-fc_junifer-release/code/junifer_jobs/PREPROCESS_ID1000/config.yaml --verbose info in virtual environment
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  3. 2023-02-08 07:18:02,711 - JUNIFER - INFO - ===== Lib Versions =====
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  4. 2023-02-08 07:18:02,711 - JUNIFER - INFO - numpy: 1.23.5
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  5. 2023-02-08 07:18:02,711 - JUNIFER - INFO - scipy: 1.10.0rc1
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  6. 2023-02-08 07:18:02,711 - JUNIFER - INFO - pandas: 1.5.2
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  7. 2023-02-08 07:18:02,711 - JUNIFER - INFO - nilearn: 0.9.2
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  8. 2023-02-08 07:18:02,711 - JUNIFER - INFO - nibabel: 4.0.2
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  9. 2023-02-08 07:18:02,711 - JUNIFER - INFO - junifer: 0.0.2.dev94
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  10. 2023-02-08 07:18:02,711 - JUNIFER - INFO - ========================
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  11. 2023-02-08 07:18:02,711 - JUNIFER - INFO - Parsing yaml file: /data/project/identification_prediction/data/aomic-fc_junifer-release/code/junifer_jobs/PREPROCESS_ID1000/config.yaml
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  12. ================================================================================
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  13. REGISTERING MY OWN PARCELLATION
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  14. 2023-02-08 07:18:02,719 - JUNIFER - INFO - Fetching one of Schaefer parcellations.
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  15. 2023-02-08 07:18:02,719 - JUNIFER - INFO - Parcellation parameters:
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  16. 2023-02-08 07:18:02,719 - JUNIFER - INFO - 	n_rois: 100
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  17. 2023-02-08 07:18:02,720 - JUNIFER - INFO - 	yeo_networks: 17
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  18. 2023-02-08 07:18:02,720 - JUNIFER - INFO - 	resolution: 2
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  19. 2023-02-08 07:18:02,722 - JUNIFER - INFO - Loading parcellation /home/lsasse/junifer/data/parcellations/schaefer_2018/Schaefer2018_100Parcels_17Networks_order_FSLMNI152_2mm.nii.gz
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  20. 2023-02-08 07:18:02,756 - JUNIFER - INFO - Fetching one of Schaefer parcellations.
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  21. 2023-02-08 07:18:02,756 - JUNIFER - INFO - Parcellation parameters:
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  22. 2023-02-08 07:18:02,756 - JUNIFER - INFO - 	n_rois: 200
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  23. 2023-02-08 07:18:02,756 - JUNIFER - INFO - 	yeo_networks: 17
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  24. 2023-02-08 07:18:02,756 - JUNIFER - INFO - 	resolution: 2
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  25. 2023-02-08 07:18:02,758 - JUNIFER - INFO - Loading parcellation /home/lsasse/junifer/data/parcellations/schaefer_2018/Schaefer2018_200Parcels_17Networks_order_FSLMNI152_2mm.nii.gz
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  26. 2023-02-08 07:18:02,794 - JUNIFER - INFO - Fetching one of Schaefer parcellations.
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  27. 2023-02-08 07:18:02,794 - JUNIFER - INFO - Parcellation parameters:
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  28. 2023-02-08 07:18:02,794 - JUNIFER - INFO - 	n_rois: 400
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  29. 2023-02-08 07:18:02,794 - JUNIFER - INFO - 	yeo_networks: 17
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  30. 2023-02-08 07:18:02,794 - JUNIFER - INFO - 	resolution: 2
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  31. 2023-02-08 07:18:02,796 - JUNIFER - INFO - Loading parcellation /home/lsasse/junifer/data/parcellations/schaefer_2018/Schaefer2018_400Parcels_17Networks_order_FSLMNI152_2mm.nii.gz
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  32. ================================================================================
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  33. 2023-02-08 07:18:02,832 - JUNIFER - INFO - Registering SmoothedFC in marker
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  34. 2023-02-08 07:18:02,832 - JUNIFER - INFO - Collecting data using SQLiteFeatureStorage
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  35. 2023-02-08 07:18:02,832 - JUNIFER - INFO - Collecting data from ../../../junifer_storage/ID1000/*ID1000
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  36. 2023-02-09 03:54:03,741 - JUNIFER - INFO - Collect done
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