# Comparing the correlation structure of a network model across simulators
This folder contains the workflow to create correlation matrices from previously simulated spiking activity of the polychonization model ([Izhikevich 2006](https://doi.org/10.1162/089976606775093882)) generated with two different Simulators (C, SpiNNaker).
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The comparison use-case and the corresponding data is taken from [Trensch et al. 2018](https://doi.org/10.3389/fninf.2018.00081) and [Gutzen et al. 2018](https://doi.org/10.3389/fninf.2018.00090), [Trensch et al. 2018](https://doi.org/10.3389/fninf.2018.00081) with the corresponding public data repository [INM-6/network_validation](https://gin.g-node.org/INM-6/network_validation).
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The comparison use-case and the corresponding data is taken from (Trensch et al. 2018)[https://doi.org/10.3389/fninf.2018.00081] and (Gutzen et al. 2018)[https://doi.org/10.3389/fninf.2018.00090], (Trensch et al. 2018)[https://doi.org/10.3389/fninf.2018.00081] with the corresponding public data repository (https://gin.g-node.org/INM-6/network_validation)[https://gin.g-node.org/INM-6/network_validation].
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To perform the comparisons with the eigenangle and the Kolmogorov-Smirnov test, the main functionalities of the workflow are:
* `snakemake scan` performs the 5 comparisons across simulators.
* `snakemake results/simulator_comparison.csv` aggregates the results in a dataframe.