http://portal.g-node.org/odml/terminologies/v1.0/terminologies.xml 1.0 Lyuba Zehl 2014-04-01
http://portal.g-node.org/odml/terminologies/v1.0/terminologies.xml Information on the Cerebus^TM data acquisition system Owner of the device - string Owner Manufacturer of the device Blackrock Micorsystems string Manufacturer Location of the device - string Location User manual URL of the device - url UserManual Cerebus
http://portal.g-node.org/odml/terminologies/v1.0/terminologies.xml Information of the Cerebus^TM neural signal processor (NSP) Type of the device Real-time string Type Model of the device - string Model NeuralSignalProcessor
http://portal.g-node.org/odml/terminologies/v1.0/terminologies.xml Information on analog inputs and outputs of the device Connector port type BNC string PortType Total number of input channels 16 int InChannelCount Number of input channels used -1 int InUsedChannelCount IDs of AC coupled input channels 1 int 2 int 3 int 4 int 5 int 6 int 7 int 8 int InACChannel IDs of DC coupled input channels 9 int 10 int 11 int 12 int 13 int 14 int 15 int 16 int InDCChannel Devices from which inputs are received - string InFrom File in which input data are saved - string InSavedIn Total number of output channels 4 int OutChannelCount Number of output channels used -1 int OutUsedChannelCount Target device of each output - string OutTo File in which output data are saved - string OutSavedIn AnalogIO
http://portal.g-node.org/odml/terminologies/v1.0/terminologies.xml Information on the analog-to-digital converter Voltage range of analog input -5.0 V float 5.0 V float AIRange Maximum impedance of analog input 100.0 ??? float MaxAIImpedance Resolution of AD converter 0.15 mV/bit float Resolution Width of digital data in bits 16 bit int DataBits Sampling rate of data -1 samples/sec int SamplingRate ADConverter setup/daq
setup/daq
http://portal.g-node.org/odml/terminologies/v1.0/terminologies.xml Information on neural signal inputs and outputs of the device Digital port type Fiber-optic link string PortType Total number of input channels 128 int InChannelCount Number of input channels used -1 int InUsedChannelCount Devices from which inputs are received NeuralSignalAmplifier string InFrom File in which input data are saved - string InSavedIn NeuralSignalIO setup/daq
http://portal.g-node.org/odml/terminologies/v1.0/terminologies.xml Information on digital inputs and outputs of the device Possible digital input and output (DIO) ports ExpI string ExpO string SerialI string SerialO string ExtSync string NSPSync string DIOPorts Used digital input and output (DIO) ports - string DIOUsedPorts DigitalIO setup/daq
http://portal.g-node.org/odml/terminologies/v1.0/terminologies.xml Information on inputs and outputs of the spike detection Used method to define a data threshold for the spike detection - string ThresholdType File in which input data are saved nev string SavedIn SpikeIO
http://portal.g-node.org/odml/terminologies/v1.0/terminologies.xml Information on the filter settings Used filter type butterworth string Type States if the used filter is causal True boolean Causal High pass frequency used -1.0 Hz float HighPassFreq Low pass frequency used -1.0 Hz float LowPassFreq High pass order used -1 int HighPassOrder Low pass order used -1 int LowPassOrder Filter setup/daq
http://portal.g-node.org/odml/terminologies/v1.0/terminologies.xml Information on the recorded spike waveforms of the spike detection Waveform window width 1.6 ms float Width Sampling rate of data 30000 samples/sec int SamplingRate Number of samples before waveform passes threshold 10 samples int PreThresholdSamples Waveforms setup/daq
http://portal.g-node.org/odml/terminologies/v1.0/terminologies.xml Information on the recorded spike events of the spike detection Sampling rate of data 30000 samples/sec int SamplingRate Possible unit ID range of online sorted spike events on each channel 1 int 16 int PreSortedUnitIDRange Unit ID of unclassified spike events on each channel 0 int UnclassifiedUnitID Events setup/daq
http://portal.g-node.org/odml/terminologies/v1.0/terminologies.xml Information on rejected recorded spike events of the spike detection Amplitude limits of spike waveforms used to reject spike events -1.0 mV float AmplitudeLimits Minimum number of channels with a synchronously detected spike events used to reject these spike events -1 int SyncChannelLimit Number of samples for which spike detection is turned off after a rejected synchronous spike event -1.0 samples float SyncChannelRefPeriod Unit ID reserved for rejected spike events on each channel 255 int UnitID Rejections setup/daq
setup/daq
setup/daq/hardware
http://portal.g-node.org/odml/terminologies/v1.0/terminologies.xml Information on the Cerebus^TM neural signal amplifier (NSA) Type of amplifier Front-End Amplifier string Type Model of amplifier - string Model Total number of analog input channels 128 int AIChannelCount Number of analog input channels used -1 int AIUsedChannelCount NeuralSignalAmplifier
http://portal.g-node.org/odml/terminologies/v1.0/terminologies.xml Information on the analog-to-digital converter Voltage range of analog input -8.192 mV float 8.192 mV float AIRange Maximum impedance of analog input -1.0 G??? float MaxAIImpedance Resolution of AD converter 0.25 ??V/bit float Resolution Width of digital data in bits 16 bit int DataBits Sampling rate of data -1 samples/sec int SamplingRate ADConverter setup/daq
http://portal.g-node.org/odml/terminologies/v1.0/terminologies.xml Information on the filter settings Filter type used butterworth string Type States if the used filter is causal True boolean Causal High pass frequency used 0.3 Hz float HighPassFreq Low pass frequency used 7.5 kHz float LowPassFreq High pass order used 1 int HighPassOrder Low pass order used 3 int LowPassOrder Filter setup/daq
http://portal.g-node.org/odml/terminologies/v1.0/terminologies.xml Information on the amplifier Gain used -1 int Gain Amplifier setup/daq
setup/daq/hardware
http://portal.g-node.org/odml/terminologies/v1.0/terminologies.xml Information on the Cerebus^TM neural signal stimulator (NSS) NeuralSignalStimulator setup/daq/hardware
http://portal.g-node.org/odml/terminologies/v1.0/terminologies.xml Information on the Cerebus^TM control computer CPU model - string CPU Amount of RAM -1.0 GB float RAM Mainboard type - string Mainboard Disk capacity of data storage -1.0 GB float HarddiskCapacity Type of operating system - string OSType Version of operating system - string OSVersion ControlComputer
http://portal.g-node.org/odml/terminologies/v1.0/terminologies.xml Information on the control software of the Cerebus^TM system ControlSoftware setup/daq
setup/daq/software
setup/daq
http://portal.g-node.org/odml/terminologies/v1.0/terminologies.xml Information on the Blackrock Utah Electrode Array Owner of the device - string Owner Serial number of the device - string SerialNo Manufacturer of the device Blackrock Microsystems string Manufacturer Material of wires connecting array and connector Pt/Au string WiresMaterial Diameter of each wire 25.0 ??m float WiresDiameter Length of each wire -1.0 mm float WiresLength UtahArray
http://portal.g-node.org/odml/terminologies/v1.0/terminologies.xml Information on the used connector Style of the connector - string Style Height of the connector -1.0 mm float Height Diameter of the base of the connector -1.0 mm float DiameterBase Diameter of the body of the connector -1.0 mm float DiameterBody Width of the connector -1.0 mm float Width Length of the connector -1.0 mm float Length Type of implantation - string ImplantType Type of mounting to the skull - string SkullMount Connector setup/daq/hardware
http://portal.g-node.org/odml/terminologies/v1.0/terminologies.xml Information on the array used Number of array grids 0 int GridNo Number of reference wires 2 int NoReferences Number of ground wires 1 int NoGrounds Array
http://portal.g-node.org/odml/terminologies/v1.0/terminologies.xml Information on array grid Grid ID -1 int ID Geometry of the electrode lengths - string ElectrodeGeometry Electrode site metal option - string ElectrodeMetal Inter-electrode-distance -1.0 ??m float ElectrodePitch Insulation material Parylene-C string Insulation Number of electrode rows. -1 int GridRows Number of electrode columns -1 int GridColumns Width of array grid -1.0 mm float GridWidth Length of array grid -1.0 mm float GridLength Total number of electrodes -1 int ElectrodeCount Number of connected/active electrodes 0 int ActiveElectrodeCount Grid_XX setup/daq/hardware
http://portal.g-node.org/odml/terminologies/v1.0/terminologies.xml Information on array electrodes Total number of electrodes -1 int ElectrodeCount Number of connected/active electrodes -1 int ActiveElectrodeCount Electrodes
http://portal.g-node.org/odml/terminologies/v1.0/terminologies.xml Information on electrode Electrode ID -1 int ID Grid ID -1 int GridID Bank ID -1 int BankID Pin ID -1 int PinID Connector aligned ID -1 int IDca Pre-implantation impedance -1.0 k??? float Impedance Auto impedance during implantation -1.0 k??? float AutoImpedance Length -1.0 mm float Length IDs of single units -1 int SUAIDs IDs of multi units 0 int MUAIDs IDs for rejected units 255 int NoiseIDs Threshold used for spike detection -1.0 mV float SpikeThreshold Electrode_XXX setup/daq/hardware
setup/daq/hardware
setup/daq/hardware
setup/daq/hardware
http://portal.g-node.org/odml/terminologies/v1.0/terminologies.xml Information on the headstage used Model of device - string Model Gain used -1 int Gain Devices from which inputs are received UtahArray string InFrom Target device of each output NeuralSignalAmplifier string OutTo Headstage setup/daq/hardware