http://portal.g-node.org/odml/terminologies/v1.1/terminologies.xml 1.0 Lyuba Zehl 2014-04-01
http://portal.g-node.org/odml/terminologies/v1.1/terminologies.xml Information on the Cerebus^TM data acquisition system Owner string - Owner of the device Manufacturer string Blackrock Micorsystems Manufacturer of the device Location string - Location of the device UserManual url - User manual URL of the device Cerebus
http://portal.g-node.org/odml/terminologies/v1.1/terminologies.xml Information of the Cerebus^TM neural signal processor (NSP) Type string Real-time Type of the device Model string - Model of the device NeuralSignalProcessor
http://portal.g-node.org/odml/terminologies/v1.1/terminologies.xml Information on analog inputs and outputs of the device PortType string BNC Connector port type InChannelCount int 16 Total number of input channels InUsedChannelCount int -1 Number of input channels used InACChannel int [1, 2, 3, 4, 5, 6, 7, 8] IDs of AC coupled input channels InDCChannel int [9, 10, 11, 12, 13, 14, 15, 16] IDs of DC coupled input channels InFrom string - Devices from which inputs are received InSavedIn string - File in which input data are saved OutChannelCount int 4 Total number of output channels OutUsedChannelCount int -1 Number of output channels used OutTo string - Target device of each output OutSavedIn string - File in which output data are saved AnalogIO
http://portal.g-node.org/odml/terminologies/v1.1/terminologies.xml Information on the analog-to-digital converter AIRange V float [-5.0, 5.0] Voltage range of analog input MaxAIImpedance ??? float 100.0 Maximum impedance of analog input Resolution mV/bit float 0.15 Resolution of AD converter DataBits bit int 16 Width of digital data in bits SamplingRate samples/sec int -1 Sampling rate of data ADConverter setup/daq
setup/daq
http://portal.g-node.org/odml/terminologies/v1.1/terminologies.xml Information on neural signal inputs and outputs of the device PortType string Fiber-optic link Digital port type InChannelCount int 128 Total number of input channels InUsedChannelCount int -1 Number of input channels used InFrom string NeuralSignalAmplifier Devices from which inputs are received InSavedIn string - File in which input data are saved NeuralSignalIO setup/daq
http://portal.g-node.org/odml/terminologies/v1.1/terminologies.xml Information on digital inputs and outputs of the device DIOPorts string [ExpI, ExpO, SerialI, SerialO, ExtSync, NSPSync] Possible digital input and output (DIO) ports DIOUsedPorts string - Used digital input and output (DIO) ports DigitalIO setup/daq
http://portal.g-node.org/odml/terminologies/v1.1/terminologies.xml Information on inputs and outputs of the spike detection ThresholdType string - Used method to define a data threshold for the spike detection SavedIn string nev File in which input data are saved SpikeIO
http://portal.g-node.org/odml/terminologies/v1.1/terminologies.xml Information on the filter settings Type string butterworth Used filter type Causal boolean True States if the used filter is causal HighPassFreq Hz float -1.0 High pass frequency used LowPassFreq Hz float -1.0 Low pass frequency used HighPassOrder int -1 High pass order used LowPassOrder int -1 Low pass order used Filter setup/daq
http://portal.g-node.org/odml/terminologies/v1.1/terminologies.xml Information on the recorded spike waveforms of the spike detection Width ms float 1.6 Waveform window width SamplingRate samples/sec int 30000 Sampling rate of data PreThresholdSamples samples int 10 Number of samples before waveform passes threshold Waveforms setup/daq
http://portal.g-node.org/odml/terminologies/v1.1/terminologies.xml Information on the recorded spike events of the spike detection SamplingRate samples/sec int 30000 Sampling rate of data PreSortedUnitIDRange int [1, 16] Possible unit ID range of online sorted spike events on each channel UnclassifiedUnitID int 0 Unit ID of unclassified spike events on each channel Events setup/daq
http://portal.g-node.org/odml/terminologies/v1.1/terminologies.xml Information on rejected recorded spike events of the spike detection AmplitudeLimits mV float -1.0 Amplitude limits of spike waveforms used to reject spike events SyncChannelLimit int -1 Minimum number of channels with a synchronously detected spike events used to reject these spike events SyncChannelRefPeriod samples float -1.0 Number of samples for which spike detection is turned off after a rejected synchronous spike event UnitID int 255 Unit ID reserved for rejected spike events on each channel Rejections setup/daq
setup/daq
setup/daq/hardware
http://portal.g-node.org/odml/terminologies/v1.1/terminologies.xml Information on the Cerebus^TM neural signal amplifier (NSA) Type string Front-End Amplifier Type of amplifier Model string - Model of amplifier AIChannelCount int 128 Total number of analog input channels AIUsedChannelCount int -1 Number of analog input channels used NeuralSignalAmplifier
http://portal.g-node.org/odml/terminologies/v1.1/terminologies.xml Information on the analog-to-digital converter AIRange mV float [-8.192, 8.192] Voltage range of analog input MaxAIImpedance G??? float -1.0 Maximum impedance of analog input Resolution ??V/bit float 0.25 Resolution of AD converter DataBits bit int 16 Width of digital data in bits SamplingRate samples/sec int -1 Sampling rate of data ADConverter-2 setup/daq
http://portal.g-node.org/odml/terminologies/v1.1/terminologies.xml Information on the filter settings Type string butterworth Filter type used Causal boolean True States if the used filter is causal HighPassFreq Hz float 0.3 High pass frequency used LowPassFreq kHz float 7.5 Low pass frequency used HighPassOrder int 1 High pass order used LowPassOrder int 3 Low pass order used Filter-2 setup/daq
http://portal.g-node.org/odml/terminologies/v1.1/terminologies.xml Information on the amplifier Gain int -1 Gain used Amplifier setup/daq
setup/daq/hardware
http://portal.g-node.org/odml/terminologies/v1.1/terminologies.xml NeuralSignalStimulator setup/daq/hardware Information on the Cerebus^TM neural signal stimulator (NSS)
http://portal.g-node.org/odml/terminologies/v1.1/terminologies.xml Information on the Cerebus^TM control computer CPU string - CPU model RAM GB float -1.0 Amount of RAM Mainboard string - Mainboard type HarddiskCapacity GB float -1.0 Disk capacity of data storage OSType string - Type of operating system OSVersion string - Version of operating system ControlComputer
http://portal.g-node.org/odml/terminologies/v1.1/terminologies.xml ControlSoftware setup/daq Information on the control software of the Cerebus^TM system
setup/daq/software
setup/daq
http://portal.g-node.org/odml/terminologies/v1.1/terminologies.xml Information on the Blackrock Utah Electrode Array Owner string - Owner of the device SerialNo string - Serial number of the device Manufacturer Blackrock Microsystems Manufacturer of the device string WiresMaterial string Pt/Au Material of wires connecting array and connector WiresDiameter ??m float 25.0 Diameter of each wire WiresLength mm float -1.0 Length of each wire UtahArray
http://portal.g-node.org/odml/terminologies/v1.1/terminologies.xml Information on the used connector Style string - Style of the connector Height mm float -1.0 Height of the connector DiameterBase mm float -1.0 Diameter of the base of the connector DiameterBody mm float -1.0 Diameter of the body of the connector Width mm float -1.0 Width of the connector Length mm float -1.0 Length of the connector ImplantType string - Type of implantation SkullMount string - Type of mounting to the skull Connector setup/daq/hardware
http://portal.g-node.org/odml/terminologies/v1.1/terminologies.xml Information on the array used GridNo int 0 Number of array grids NoReferences int 2 Number of reference wires NoGrounds int 1 Number of ground wires Array
http://portal.g-node.org/odml/terminologies/v1.1/terminologies.xml Information on array grid ID int -1 Grid ID ElectrodeGeometry string - Geometry of the electrode lengths ElectrodeMetal string - Electrode site metal option ElectrodePitch ??m float -1.0 Inter-electrode-distance Insulation string Parylene-C Insulation material GridRows int -1 Number of electrode rows. GridColumns int -1 Number of electrode columns GridWidth mm float -1.0 Width of array grid GridLength mm float -1.0 Length of array grid ElectrodeCount int -1 Total number of electrodes ActiveElectrodeCount int 0 Number of connected/active electrodes Grid_XX setup/daq/hardware
http://portal.g-node.org/odml/terminologies/v1.1/terminologies.xml Information on array electrodes ElectrodeCount int -1 Total number of electrodes ActiveElectrodeCount int -1 Number of connected/active electrodes Electrodes
http://portal.g-node.org/odml/terminologies/v1.1/terminologies.xml Information on electrode ID int -1 Electrode ID GridID int -1 Grid ID BankID int -1 Bank ID PinID int -1 Pin ID IDca int -1 Connector aligned ID Impedance k??? float -1.0 Pre-implantation impedance AutoImpedance k??? float -1.0 Auto impedance during implantation Length mm float -1.0 Length SUAIDs int -1 IDs of single units MUAIDs int 0 IDs of multi units NoiseIDs int 255 IDs for rejected units SpikeThreshold mV float -1.0 Threshold used for spike detection Electrode_XXX setup/daq/hardware
setup/daq/hardware
setup/daq/hardware
setup/daq/hardware
http://portal.g-node.org/odml/terminologies/v1.1/terminologies.xml Information on the headstage used Model string - Model of device Gain int -1 Gain used InFrom string UtahArray Devices from which inputs are received OutTo string NeuralSignalAmplifier Target device of each output Headstage setup/daq/hardware