function [dS,f]=mtdspectrumpt(data,phi,params,t) % Multi-taper spectral derivative - point process times % % Usage: % % [dS,f]=mtdspectrumpt(data,phi,params,t) % Input: % Note that all times can be in arbitrary units. But the units have to be % consistent. So, if E is in secs, win, t have to be in secs, and Fs has to % be Hz. If E is in samples, so are win and t, and Fs=1. In case of spike % times, the units have to be consistent with the units of data as well. % data (structure array of spike times with dimension channels/trials; % also accepts 1d array of spike times) -- required % phi (angle for evaluation of derivative) -- required. % e.g. phi=[0,pi/2] giving the time and frequency derivatives % params: structure with fields tapers, pad, Fs, fpass, trialave % -optional % tapers : precalculated tapers from dpss or in the one of the following % forms: % (1) A numeric vector [TW K] where TW is the % time-bandwidth product and K is the number of % tapers to be used (less than or equal to % 2TW-1). % (2) A numeric vector [W T p] where W is the % bandwidth, T is the duration of the data and p % is an integer such that 2TW-p tapers are used. In % this form there is no default i.e. to specify % the bandwidth, you have to specify T and p as % well. Note that the units of W and T have to be % consistent: if W is in Hz, T must be in seconds % and vice versa. Note that these units must also % be consistent with the units of params.Fs: W can % be in Hz if and only if params.Fs is in Hz. % The default is to use form 1 with TW=3 and K=5 % % pad (padding factor for the FFT) - optional (can take values -1,0,1,2...). % -1 corresponds to no padding, 0 corresponds to padding % to the next highest power of 2 etc. % e.g. For N = 500, if PAD = -1, we do not pad; if PAD = 0, we pad the FFT % to 512 points, if pad=1, we pad to 1024 points etc. % Defaults to 0. % Fs (sampling frequency) - optional. Default 1. % fpass (frequency band to be used in the calculation in the form % [fmin fmax])- optional. % Default all frequencies between 0 and Fs/2 % trialave (average over trials when 1, don't average when 0) - % optional. Default 0 % t (time grid over which the tapers are to be calculated: % this argument is useful when calling the spectrum % calculation routine from a moving window spectrogram % calculation routine). If left empty, the spike times % are used to define the grid. % Output: % dS (spectral derivative in form phi x frequency x channels/trials if trialave=0; % function of phi x frequency if trialave=1) % f (frequencies) if nargin < 2; error('Need data and angle'); end; if nargin < 3; params=[]; end; [tapers,pad,Fs,fpass,err,trialave,params]=getparams(params); clear err params data=change_row_to_column(data); dt=1/Fs; % sampling time if nargin < 4; [mintime,maxtime]=minmaxsptimes(data); t=mintime:dt:maxtime+dt; % time grid for prolates end; N=length(t); % number of points in grid for dpss nfft=max(2^(nextpow2(N)+pad),N); % number of points in fft of prolates [f,findx]=getfgrid(Fs,nfft,fpass); % get frequency grid for evaluation tapers=dpsschk(tapers,N,Fs); % check tapers K=size(tapers,2); J=mtfftpt(data,tapers,nfft,t,f,findx); % mt fft for point process times A=sqrt(1:K-1); A=repmat(A,[size(J,1) 1]); A=repmat(A,[1 1 size(J,3)]); S=squeeze(mean(J(:,1:K-1,:).*A.*conj(J(:,2:K,:)),2)); if trialave; S=squeeze(mean(S,2));end; nphi=length(phi); for p=1:nphi; dS(p,:,:)=real(exp(i*phi(p))*S); end; dS=squeeze(dS); dS=change_row_to_column(dS);