MRIQC: individual bold report

Summary

  • BIDS filename: sub-95488_ses-07_task-breathhold_bold.
  • Date and time: 2023-10-19, 23:27.
  • MRIQC version: 22.0.0rc1.
  • Workflow details:
    • Framewise Displacement was computed using 3dvolreg (AFNI)
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
2023-10-19T23:17:34.056012 image/svg+xml Matplotlib v3.5.1, https://matplotlib.org/
Standard deviation map
2023-10-19T23:17:36.003551 image/svg+xml Matplotlib v3.5.1, https://matplotlib.org/
FMRI summary plot
2023-10-19T23:27:15.623794 image/svg+xml Matplotlib v3.5.1, https://matplotlib.org/

Other

aor0.0016950209205020916
aqi0.013740811464435145
dummy_trs0
dvarsnstd60.914817761890774
dvarsstd1.6695840018487393
dvarsvstd0.9955383246218488
efc0.5308132430842533
fber3433.046142578125
fdmean0.1718923336382773
fdnum78
fdperc32.63598326359833
fwhmavg1.5353824995282885
fwhmx1.6733381818181818
fwhmy1.8740247272727273
fwhmz1.0587845894939574
gcor0.0185019
gsrx-0.028795087710022926
gsry0.06644070893526077
sizet239
sizex64
sizey64
sizez15
snr2.8145855382092657
spacingtr2.5
spacingx3.4375
spacingy3.4375
spacingz7.800000190734863
summarybgk70.08194794582711
summarybgmad28.212408342150518
summarybgmean160.53955078125
summarybgmedian42.103126525878906
summarybgn30709.0
summarybgp0516.691486358642578
summarybgp95746.3607055664058
summarybgstdv359.12506103515625
summaryfgk13.16731954325152
summaryfgmad533.8819459983499
summaryfgmean2735.46435546875
summaryfgmedian2510.867919921875
summaryfgn12067.0
summaryfgp051889.468701171875
summaryfgp954355.833544921875
summaryfgstdv892.0545654296875
tsnr38.60693359375
AcquisitionMatrixPE64
AcquisitionNumber1
AcquisitionTime10:14:6.190000
BandwidthPerPixelPhaseEncode85.227
BaseResolution64
BodyPartExaminedBRAIN
CoilCombinationMethodSum of Squares
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20211006
Dcm2bidsVersion2.1.6
DerivedVendorReportedEchoSpacing0.000550002
DeviceSerialNumber66073
DwellTime3.5e-06
EchoTime0.09
EchoTrainLength21
EffectiveEchoSpacing0.000183334
FlipAngle90
FrameTimesStart[0, 0.15, 0.3, 0.45, 0.6, 0.75, 0.9, 1.05, 1.2, 1.35, 1.5, 1.65, 1.8, 1.95, 2.1025, 2.2525, 2.4025, 2.5525, 2.7025, 2.8525, 3.0025, 3.1525, 3.3025, 3.4525, 3.6025, 3.7525, 3.9025, 4.0525, 4.2025, 4.3525, 4.5025, 4.6525, 4.8025, 4.9525, 5.1025, 5.2525, 5.4025, 5.5525, 5.7025, 5.8525, 6.0025, 6.1525, 6.3025, 6.4525, 6.6025, 6.7525, 6.9025, 7.0525, 7.2025, 7.3525, 7.5025, 7.6525, 7.8025, 7.9525, 8.1025, 8.2525, 8.405, 8.555, 8.705, 8.855, 9.12, 9.27, 9.42, 9.57, 9.72, 9.87, 10.02, 10.17, 10.32, 10.47, 10.62, 10.77, 10.92, 11.07, 11.22, 11.37, 11.52, 11.67, 11.82, 11.97, 12.12, 12.27, 12.42, 12.57, 12.72, 12.87, 13.02, 13.17, 13.32, 13.47, 13.62, 13.77, 13.92, 14.07, 14.22, 14.37, 14.52, 14.67, 14.82, 14.97, 15.12, 15.2725, 15.4225, 15.5725, 15.7225, 15.8725, 16.0225, 16.1725, 16.3225, 16.4725, 16.6225, 16.7725, 16.9225, 17.0725, 17.2225, 17.3725, 17.5225, 17.6725, 17.8225, 17.9725, 18.2375, 18.3875, 18.5375, 18.6875, 18.8375, 18.9875, 19.1375, 19.2875, 19.4375, 19.5875, 19.7375, 19.8875, 20.0375, 20.1875, 20.3375, 20.4875, 20.6375, 20.7875, 20.9375, 21.0875, 21.2375, 21.3875, 21.5375, 21.6875, 21.8375, 21.9875, 22.14, 22.29, 22.44, 22.59, 22.74, 22.89, 23.04, 23.19, 23.34, 23.49, 23.64, 23.79, 23.94, 24.09, 24.24, 24.39, 24.54, 24.69, 24.84, 24.99, 25.14, 25.29, 25.44, 25.59, 25.74, 25.89, 26.04, 26.19, 26.34, 26.49, 26.64, 26.79, 26.94, 27.09, 27.355, 27.505, 27.655, 27.805, 27.955, 28.105, 28.255, 28.405, 28.555, 28.705, 28.855, 29.0075, 29.1575, 29.3075, 29.4575, 29.6075, 29.7575, 29.9075, 30.0575, 30.2075, 30.3575, 30.5075, 30.6575, 30.8075, 30.9575, 31.1075, 31.2575, 31.4075, 31.5575, 31.7075, 31.8575, 32.0075, 32.1575, 32.3075, 32.4575, 32.6075, 32.7575, 32.9075, 33.0575, 33.2075, 33.3575, 33.5075, 33.6575, 33.8075, 33.9575, 34.1075, 34.2575, 34.4075, 34.5575, 34.7075, 34.8575, 35.0075, 35.1575, 35.31, 35.46, 35.61, 35.76, 35.91, 36.06]
ImageOrientationPatientDICOM[1, 0, 0, 0, 1, 0]
ImageOrientationTextTra
ImageType['ORIGINAL', 'PRIMARY', 'M', 'ND', 'NORM', 'MOSAIC']
ImagingFrequency123.254
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressMaindy Road *,CARDIFF-Note:body18 in Connectome,Wales,GB,CF24 4HQ
InstitutionNameCUBRIC
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma
MatrixCoilModeGRAPPA
ModalityMR
ParallelReductionFactorInPlane3
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps63
PhaseResolution1
PixelBandwidth2230
ProcedureStepDescription3TWproj^314_WAND
ProtocolNamemg_ep2d_se_CBV_VE11c_BHold
PulseSequenceDetails%CustomerSeq%\mg_ep2d_se_VE11c
PulseSequenceTypeSpin Echo EPI
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE64
RefLinesPE36
RepetitionTime2.5
SAR0.102287
ScanOptionsFS
ScanningSequenceEP
SequenceNameepse2d1_64
SequenceVariantSK\SP
SeriesDescriptionmg_ep2d_se_CBV_VE11c_BHold
SeriesNumber18
ShimSetting[9776, 86, -2662, 320, 38, 48, -94, 53]
SliceThickness6.5
SliceTiming[0, 1.3325, 0.165, 1.5, 0.3325, 1.665, 0.5, 1.8325, 0.665, 2, 0.8325, 2.165, 1, 2.3325, 1.165]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices7.8
SpoilingStateTrue
StationNameAWP66073
TaskNamebreathhold
TotalReadoutTime0.01155
TxRefAmp236.299
md5sum19547765dbe8e4ef8f826174f27554f1
softwaremriqc
version22.0.0rc1
Rate Image
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.