MRIQC: individual bold report

Summary

  • BIDS filename: sub-41590_ses-07_task-breathhold_bold.
  • Date and time: 2023-10-18, 13:16.
  • MRIQC version: 22.0.0rc1.
  • Workflow details:
    • Framewise Displacement was computed using 3dvolreg (AFNI)
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
2023-10-18T13:06:16.374041 image/svg+xml Matplotlib v3.5.1, https://matplotlib.org/
Standard deviation map
2023-10-18T13:06:22.524899 image/svg+xml Matplotlib v3.5.1, https://matplotlib.org/
FMRI summary plot
2023-10-18T13:16:50.082603 image/svg+xml Matplotlib v3.5.1, https://matplotlib.org/

Other

aor0.006339158878504673
aqi0.03529097514018691
dummy_trs1
dvarsnstd57.977245241032854
dvarsstd1.2981342489201884
dvarsvstd0.8984189670422537
efc0.5268640846169793
fber5065.9443359375
fdmean0.24460684461551493
fdnum82
fdperc38.3177570093458
fwhmavg1.5152384416780948
fwhmx1.6594327272727272
fwhmy1.7842967272727273
fwhmz1.1019858704888301
gcor0.0109438
gsrx-0.01052275113761425
gsry0.048086050897836685
sizet214
sizex64
sizey64
sizez15
snr3.096115866621526
spacingtr2.5
spacingx3.4375
spacingy3.4375
spacingz7.800000190734863
summarybgk85.05924461766483
summarybgmad36.7264217047321
summarybgmean163.5352325439453
summarybgmedian47.91326141357422
summarybgn29701.0
summarybgp0517.45363426208496
summarybgp95759.1864013671875
summarybgstdv357.81561279296875
summaryfgk6.418587505636431
summaryfgmad725.4775158484575
summaryfgmean3664.669189453125
summaryfgmedian3378.1552734375
summaryfgn12629.0
summaryfgp052523.1873046875003
summaryfgp955852.687695312497
summaryfgstdv1091.0513916015625
tsnr24.325353622436523
AcquisitionMatrixPE64
AcquisitionNumber1
AcquisitionTime10:21:43.697500
BandwidthPerPixelPhaseEncode85.227
BaseResolution64
BodyPartExaminedBRAIN
CoilCombinationMethodSum of Squares
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20211006
Dcm2bidsVersion2.1.6
DerivedVendorReportedEchoSpacing0.000550002
DeviceSerialNumber66073
DwellTime3.5e-06
EchoTime0.09
EchoTrainLength21
EffectiveEchoSpacing0.000183334
FlipAngle90
ImageOrientationPatientDICOM[1, 0, 0, 0, 1, 0]
ImageOrientationTextTra
ImageType['ORIGINAL', 'PRIMARY', 'M', 'ND', 'NORM', 'MOSAIC']
ImagingFrequency123.246
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressMaindy Road *,CARDIFF-Note:body18, flex Coils and interface in Co
InstitutionNameCUBRIC_3T_West
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma
MatrixCoilModeGRAPPA
ModalityMR
ParallelReductionFactorInPlane3
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps63
PhaseResolution1
PixelBandwidth2230
ProcedureStepDescription3TWproj^314_WAND
ProtocolNamemg_ep2d_se_CBV_VE11c
PulseSequenceDetails%CustomerSeq%\mg_ep2d_se_VE11c
PulseSequenceTypeSpin Echo EPI
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE64
RefLinesPE36
RepetitionTime2.5
SAR0.10436
ScanOptionsFS
ScanningSequenceEP
SequenceNameepse2d1_64
SequenceVariantSK\SP
SeriesDescriptionmg_ep2d_se_CBV_VE11c
SeriesNumber18
ShimSetting[9810, 36, -2642, 395, 96, -40, -75, -20]
SliceThickness6.5
SliceTiming[0, 1.3325, 0.165, 1.5, 0.3325, 1.665, 0.5, 1.8325, 0.665, 2, 0.8325, 2.165, 1, 2.3325, 1.165]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices7.8
SpoilingStateTrue
StationNameAWP66073
TaskNamebreathhold
TotalReadoutTime0.01155
TxRefAmp239.781
md5sum9a7d150ebbe9b56cc4b18b14c900ef44
softwaremriqc
version22.0.0rc1
Rate Image
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.