MRIQC: individual bold report

Summary

  • BIDS filename: sub-76147_ses-07_task-breathhold_bold.
  • Date and time: 2023-10-19, 11:07.
  • MRIQC version: 22.0.0rc1.
  • Workflow details:
    • Framewise Displacement was computed using 3dvolreg (AFNI)
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
2023-10-19T10:57:37.389820 image/svg+xml Matplotlib v3.5.1, https://matplotlib.org/
Standard deviation map
2023-10-19T10:57:42.226444 image/svg+xml Matplotlib v3.5.1, https://matplotlib.org/
FMRI summary plot
2023-10-19T11:07:04.092177 image/svg+xml Matplotlib v3.5.1, https://matplotlib.org/

Other

aor0.0010933891213389122
aqi0.013109865523012552
dummy_trs0
dvarsnstd65.57966368558824
dvarsstd1.488101023529412
dvarsvstd0.9946326034453783
efc0.4965075195077445
fber3505.590576171875
fdmean0.28890187767707864
fdnum157
fdperc65.69037656903765
fwhmavg1.474047371225531
fwhmx1.5532712727272726
fwhmy1.8033105454545455
fwhmz1.0655602954947752
gcor0.0181666
gsrx-0.029062572866678238
gsry0.08138390630483627
sizet239
sizex64
sizey64
sizez15
snr2.8973487044056463
spacingtr2.5
spacingx3.4375
spacingy3.4375
spacingz7.799999713897705
summarybgk29.416738866791498
summarybgmad26.556875266047044
summarybgmean145.64012145996094
summarybgmedian36.31607437133789
summarybgn33640.0
summarybgp0514.101960563659668
summarybgp95643.0213745117185
summarybgstdv280.89794921875
summaryfgk6.665538106522565
summaryfgmad441.48878911706163
summaryfgmean2301.6220703125
summaryfgmedian2101.529296875
summaryfgn9561.0
summaryfgp051579.11669921875
summaryfgp953708.251953125
summaryfgstdv725.2904663085938
tsnr38.09211349487305
AcquisitionMatrixPE64
AcquisitionNumber1
AcquisitionTime10:19:37.352500
BandwidthPerPixelPhaseEncode85.227
BaseResolution64
BodyPartExaminedBRAIN
CoilCombinationMethodSum of Squares
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20211006
Dcm2bidsVersion2.1.6
DerivedVendorReportedEchoSpacing0.000550002
DeviceSerialNumber66073
DwellTime3.5e-06
EchoTime0.09
EchoTrainLength21
EffectiveEchoSpacing0.000183334
FlipAngle90
ImageOrientationPatientDICOM[1, 0, 0, 0, 1, 0]
ImageOrientationTextTra
ImageType['ORIGINAL', 'PRIMARY', 'M', 'ND', 'NORM', 'MOSAIC']
ImagingFrequency123.254
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressMaindy Road *,CARDIFF-Note:body18 in Connectome,Wales,GB,CF24 4HQ
InstitutionNameCUBRIC
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma
MatrixCoilModeGRAPPA
ModalityMR
ParallelReductionFactorInPlane3
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps63
PhaseResolution1
PixelBandwidth2230
ProcedureStepDescription3TWproj^314_WAND
ProtocolNamemg_ep2d_se_CBV_VE11c_BHold
PulseSequenceDetails%CustomerSeq%\mg_ep2d_se_VE11c
PulseSequenceTypeSpin Echo EPI
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE64
RefLinesPE36
RepetitionTime2.5
SAR0.104264
ScanOptionsFS
ScanningSequenceEP
SequenceNameepse2d1_64
SequenceVariantSK\SP
SeriesDescriptionmg_ep2d_se_CBV_VE11c_BHold
SeriesNumber18
ShimSetting[9789, 75, -2659, 499, -9, -322, 40, 15]
SliceThickness6.5
SliceTiming[0, 1.3325, 0.1675, 1.5, 0.3325, 1.6675, 0.5, 1.8325, 0.6675, 2, 0.8325, 2.1675, 1, 2.3325, 1.1675]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices7.8
SpoilingStateTrue
StationNameAWP66073
TaskNamebreathhold
TotalReadoutTime0.01155
TxRefAmp257.238
md5sum91eaf26d45629451f6f8fb7c5c867cfe
softwaremriqc
version22.0.0rc1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.