MRIQC: individual bold report

Summary

  • BIDS filename: sub-69881_ses-07_task-breathhold_bold.
  • Date and time: 2023-10-19, 04:59.
  • MRIQC version: 22.0.0rc1.
  • Workflow details:
    • Framewise Displacement was computed using 3dvolreg (AFNI)
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
2023-10-19T04:50:10.882119 image/svg+xml Matplotlib v3.5.1, https://matplotlib.org/
Standard deviation map
2023-10-19T04:50:17.052693 image/svg+xml Matplotlib v3.5.1, https://matplotlib.org/
FMRI summary plot
2023-10-19T04:59:23.345852 image/svg+xml Matplotlib v3.5.1, https://matplotlib.org/

Other

aor0.02994502092050209
aqi0.030901202008368198
dummy_trs0
dvarsnstd64.88409947147062
dvarsstd1.6390234567647068
dvarsvstd1.2227214007563025
efc0.5224955603239584
fber4067.670166015625
fdmean0.2268316440587711
fdnum63
fdperc26.359832635983263
fwhmavg1.4524193294654395
fwhmx1.5425570909090909
fwhmy1.768224
fwhmz1.0464768974872272
gcor0.0209077
gsrx-0.031947046518325806
gsry0.08014969527721405
sizet239
sizex64
sizey64
sizez15
snr3.256700116810157
spacingtr2.5
spacingx3.4375
spacingy3.4375
spacingz7.800000190734863
summarybgk33.876281405853724
summarybgmad32.30238303865342
summarybgmean178.6709442138672
summarybgmedian41.94922637939453
summarybgn31660.0
summarybgp0515.88470253944397
summarybgp95781.334649658203
summarybgstdv359.64361572265625
summaryfgk8.529097066581935
summaryfgmad550.0367359432042
summaryfgmean2877.278564453125
summaryfgmedian2679.452392578125
summaryfgn10943.0
summaryfgp051983.819775390625
summaryfgp954389.9234375
summaryfgstdv822.713134765625
tsnr21.798442840576172
AcquisitionMatrixPE64
AcquisitionNumber1
AcquisitionTime10:35:20.715000
BandwidthPerPixelPhaseEncode85.227
BaseResolution64
BodyPartExaminedBRAIN
CoilCombinationMethodSum of Squares
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20211006
Dcm2bidsVersion2.1.6
DerivedVendorReportedEchoSpacing0.000550002
DeviceSerialNumber66073
DwellTime3.5e-06
EchoTime0.09
EchoTrainLength21
EffectiveEchoSpacing0.000183334
FlipAngle90
FrameTimesStart[0, 0.15, 0.3, 0.45, 0.6, 0.75, 0.9, 1.05, 1.2, 1.35, 1.5, 1.65, 1.8, 1.95, 2.1, 2.25, 2.4, 2.55, 2.7, 2.85, 3, 3.15, 3.3, 3.45, 3.6025, 3.7525, 3.9025, 4.0525, 4.2025, 4.3525, 4.5025, 4.6525, 4.8025, 4.9525, 5.1025, 5.2525, 5.4025, 5.5525, 5.7025, 5.8525, 6.0025, 6.1525, 6.3025, 6.4525, 6.6025, 6.7525, 6.9025, 7.0525, 7.2025, 7.3525, 7.5025, 7.6525, 7.8025, 7.9525, 8.1025, 8.2525, 8.4025, 8.5525, 8.7025, 8.8525, 9.1175, 9.2675, 9.4175, 9.5675, 9.7175, 9.8675, 10.0175, 10.1675, 10.3175, 10.47, 10.62, 10.77, 10.92, 11.07, 11.22, 11.37, 11.52, 11.67, 11.82, 11.97, 12.12, 12.27, 12.42, 12.57, 12.72, 12.87, 13.02, 13.17, 13.32, 13.47, 13.62, 13.77, 13.92, 14.07, 14.22, 14.37, 14.52, 14.67, 14.82, 14.97, 15.12, 15.27, 15.42, 15.57, 15.72, 15.87, 16.02, 16.17, 16.32, 16.47, 16.62, 16.7725, 16.9225, 17.0725, 17.2225, 17.3725, 17.5225, 17.6725, 17.8225, 17.9725, 18.2375, 18.3875, 18.5375, 18.6875, 18.8375, 18.9875, 19.1375, 19.2875, 19.4375, 19.5875, 19.7375, 19.8875, 20.0375, 20.1875, 20.3375, 20.4875, 20.6375, 20.7875, 20.9375, 21.0875, 21.2375, 21.3875, 21.5375, 21.6875, 21.8375, 21.9875, 22.1375, 22.2875, 22.4375, 22.5875, 22.7375, 22.8875, 23.0375, 23.1875, 23.3375, 23.4875, 23.64, 23.79, 23.94, 24.09, 24.24, 24.39, 24.54, 24.69, 24.84, 24.99, 25.14, 25.29, 25.44, 25.59, 25.74, 25.89, 26.04, 26.19, 26.34, 26.49, 26.64, 26.79, 26.94, 27.09, 27.355, 27.505, 27.655, 27.805, 27.955, 28.105, 28.255, 28.405, 28.555, 28.705, 28.855, 29.005, 29.155, 29.305, 29.455, 29.605, 29.755, 29.905, 30.055, 30.205, 30.355, 30.5075, 30.6575, 30.8075, 30.9575, 31.1075, 31.2575, 31.4075, 31.5575, 31.7075, 31.8575, 32.0075, 32.1575, 32.3075, 32.4575, 32.6075, 32.7575, 32.9075, 33.0575, 33.2075, 33.3575, 33.5075, 33.6575, 33.8075, 33.9575, 34.1075, 34.2575, 34.4075, 34.5575, 34.7075, 34.8575, 35.0075, 35.1575, 35.3075, 35.4575, 35.6075, 35.7575, 35.9075, 36.0575]
ImageOrientationPatientDICOM[1, 0, 0, 0, 1, 0]
ImageOrientationTextTra
ImageType['ORIGINAL', 'PRIMARY', 'M', 'ND', 'NORM', 'MOSAIC']
ImagingFrequency123.254
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressMaindy Road *,CARDIFF-Note:body18 in Connectome,Wales,GB,CF24 4HQ
InstitutionNameCUBRIC_3T_West
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma
MatrixCoilModeGRAPPA
ModalityMR
ParallelReductionFactorInPlane3
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps63
PhaseResolution1
PixelBandwidth2230
ProcedureStepDescription3TWproj^314_WAND
ProtocolNamemg_ep2d_se_CBV_VE11c_BHold
PulseSequenceDetails%CustomerSeq%\mg_ep2d_se_VE11c
PulseSequenceTypeSpin Echo EPI
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE64
RefLinesPE36
RepetitionTime2.5
SAR0.105982
ScanOptionsFS
ScanningSequenceEP
SequenceNameepse2d1_64
SequenceVariantSK\SP
SeriesDescriptionmg_ep2d_se_CBV_VE11c_BHold
SeriesNumber19
ShimSetting[9782, 82, -2591, 472, 22, 6, 14, 83]
SliceThickness6.5
SliceTiming[0, 1.335, 0.1675, 1.5, 0.335, 1.6675, 0.5, 1.835, 0.6675, 2, 0.835, 2.1675, 1, 2.335, 1.1675]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices7.8
SpoilingStateTrue
StationNameAWP66073
TaskNamebreathhold
TotalReadoutTime0.01155
TxRefAmp254.83
md5sumb96c6e529c3a66af417d5d394417ea69
softwaremriqc
version22.0.0rc1
Rate Image
Download

For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.