MRIQC: individual bold report

Summary

  • BIDS filename: sub-68412_ses-07_task-breathhold_bold.
  • Date and time: 2023-10-19, 03:45.
  • MRIQC version: 22.0.0rc1.
  • Workflow details:
    • Framewise Displacement was computed using 3dvolreg (AFNI)
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
2023-10-19T03:40:25.253162 image/svg+xml Matplotlib v3.5.1, https://matplotlib.org/
Standard deviation map
2023-10-19T03:40:23.558867 image/svg+xml Matplotlib v3.5.1, https://matplotlib.org/
FMRI summary plot
2023-10-19T03:45:23.342108 image/svg+xml Matplotlib v3.5.1, https://matplotlib.org/

Other

aor0.0016110878661087867
aqi0.015208208158995816
dummy_trs0
dvarsnstd54.49332320630253
dvarsstd1.625385389201681
dvarsvstd0.9917642836554621
efc0.5194247072776543
fber5248.88232421875
fdmean0.16579962081093158
fdnum74
fdperc30.96234309623431
fwhmavg1.423715423910852
fwhmx1.5289425454545456
fwhmy1.6889716363636362
fwhmz1.0532320899143741
gcor0.0277831
gsrx-0.027695417404174805
gsry0.056975107640028
sizet239
sizex64
sizey64
sizez15
snr4.299484515243946
spacingtr2.5
spacingx3.4375
spacingy3.4375
spacingz7.799999713897705
summarybgk103.6636583687998
summarybgmad25.124638279651833
summarybgmean141.01361083984375
summarybgmedian38.30348205566406
summarybgn31030.0
summarybgp0515.60097074508667
summarybgp95639.8121765136717
summarybgstdv363.68817138671875
summaryfgk11.27780973035253
summaryfgmad441.6178290806596
summaryfgmean2914.072265625
summaryfgmedian2775.0537109375
summaryfgn11378.0
summaryfgp052210.317761230469
summaryfgp954030.83876953125
summaryfgstdv645.4103393554688
tsnr46.64471435546875
AcquisitionMatrixPE64
AcquisitionNumber1
AcquisitionTime10:44:36.257500
BandwidthPerPixelPhaseEncode85.227
BaseResolution64
BodyPartExaminedBRAIN
CoilCombinationMethodSum of Squares
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20211006
Dcm2bidsVersion2.1.6
DerivedVendorReportedEchoSpacing0.000550002
DeviceSerialNumber66073
DwellTime3.5e-06
EchoTime0.09
EchoTrainLength21
EffectiveEchoSpacing0.000183334
FlipAngle90
FrameTimesStart[0, 0.15, 0.3, 0.45, 0.6, 0.75, 0.9, 1.05, 1.2, 1.35, 1.5, 1.65, 1.8025, 1.9525, 2.1025, 2.2525, 2.4025, 2.5525, 2.7025, 2.8525, 3.0025, 3.1525, 3.3025, 3.4525, 3.6025, 3.7525, 3.9025, 4.0525, 4.2025, 4.3525, 4.5025, 4.6525, 4.8025, 4.9525, 5.1025, 5.2525, 5.4025, 5.5525, 5.7025, 5.8525, 6.0025, 6.1525, 6.3025, 6.4525, 6.6025, 6.7525, 6.9025, 7.0525, 7.2025, 7.3525, 7.5025, 7.6525, 7.8025, 7.9525, 8.105, 8.255, 8.405, 8.555, 8.705, 8.855, 9.12, 9.27, 9.42, 9.57, 9.72, 9.87, 10.02, 10.17, 10.32, 10.47, 10.62, 10.77, 10.92, 11.07, 11.22, 11.37, 11.52, 11.67, 11.82, 11.97, 12.12, 12.27, 12.42, 12.57, 12.72, 12.87, 13.02, 13.17, 13.32, 13.47, 13.62, 13.77, 13.92, 14.07, 14.22, 14.37, 14.52, 14.67, 14.82, 14.9725, 15.1225, 15.2725, 15.4225, 15.5725, 15.7225, 15.8725, 16.0225, 16.1725, 16.3225, 16.4725, 16.6225, 16.7725, 16.9225, 17.0725, 17.2225, 17.3725, 17.5225, 17.6725, 17.8225, 17.9725, 18.2375, 18.3875, 18.5375, 18.6875, 18.8375, 18.9875, 19.1375, 19.2875, 19.4375, 19.5875, 19.7375, 19.8875, 20.0375, 20.1875, 20.3375, 20.4875, 20.6375, 20.7875, 20.9375, 21.0875, 21.2375, 21.3875, 21.5375, 21.6875, 21.84, 21.99, 22.14, 22.29, 22.44, 22.59, 22.74, 22.89, 23.04, 23.19, 23.34, 23.49, 23.64, 23.79, 23.94, 24.09, 24.24, 24.39, 24.54, 24.69, 24.84, 24.99, 25.14, 25.29, 25.44, 25.59, 25.74, 25.89, 26.04, 26.19, 26.34, 26.49, 26.64, 26.79, 26.94, 27.09, 27.355, 27.505, 27.655, 27.805, 27.955, 28.105, 28.255, 28.405, 28.555, 28.7075, 28.8575, 29.0075, 29.1575, 29.3075, 29.4575, 29.6075, 29.7575, 29.9075, 30.0575, 30.2075, 30.3575, 30.5075, 30.6575, 30.8075, 30.9575, 31.1075, 31.2575, 31.4075, 31.5575, 31.7075, 31.8575, 32.0075, 32.1575, 32.3075, 32.4575, 32.6075, 32.7575, 32.9075, 33.0575, 33.2075, 33.3575, 33.5075, 33.6575, 33.8075, 33.9575, 34.1075, 34.2575, 34.4075, 34.5575, 34.7075, 34.8575, 35.01, 35.16, 35.31, 35.46, 35.61, 35.76, 35.91, 36.06]
ImageOrientationPatientDICOM[1, 0, 0, 0, 1, 0]
ImageOrientationTextTra
ImageType['ORIGINAL', 'PRIMARY', 'M', 'ND', 'NORM', 'MOSAIC']
ImagingFrequency123.254
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressMaindy Road *,CARDIFF-Note:body18, flex Coils and interface in Co
InstitutionNameCUBRIC_3T_West
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma
MatrixCoilModeGRAPPA
ModalityMR
ParallelReductionFactorInPlane3
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps63
PhaseResolution1
PixelBandwidth2230
ProcedureStepDescription3TWproj^314_WAND
ProtocolNamemg_ep2d_se_CBV_VE11c_BHold
PulseSequenceDetails%CustomerSeq%\mg_ep2d_se_VE11c
PulseSequenceTypeSpin Echo EPI
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE64
RefLinesPE36
RepetitionTime2.5
SAR0.0938255
ScanOptionsFS
ScanningSequenceEP
SequenceNameepse2d1_64
SequenceVariantSK\SP
SeriesDescriptionmg_ep2d_se_CBV_VE11c_BHold
SeriesNumber18
ShimSetting[9809, 49, -2665, 319, 40, -47, -19, -6]
SliceThickness6.5
SliceTiming[0, 1.3325, 0.1675, 1.5, 0.3325, 1.6675, 0.5, 1.8325, 0.6675, 2, 0.8325, 2.1675, 1, 2.3325, 1.1675]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices7.8
SpoilingStateTrue
StationNameAWP66073
TaskNamebreathhold
TotalReadoutTime0.01155
TxRefAmp216.862
md5sum9a51a6b1211dd0651d700f712e5333db
softwaremriqc
version22.0.0rc1
Rate Image
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.