MRIQC: individual bold report

Summary

  • BIDS filename: sub-64988_ses-07_task-breathhold_bold.
  • Date and time: 2023-10-19, 02:10.
  • MRIQC version: 22.0.0rc1.
  • Workflow details:
    • Framewise Displacement was computed using 3dvolreg (AFNI)
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
2023-10-19T01:58:38.541890 image/svg+xml Matplotlib v3.5.1, https://matplotlib.org/
Standard deviation map
2023-10-19T01:58:44.559821 image/svg+xml Matplotlib v3.5.1, https://matplotlib.org/
FMRI summary plot
2023-10-19T02:10:08.083723 image/svg+xml Matplotlib v3.5.1, https://matplotlib.org/

Other

aor0.003070697674418604
aqi0.022912684418604647
dummy_trs0
dvarsnstd55.820335619626185
dvarsstd1.5731636826168218
dvarsvstd0.988638196682243
efc0.49347588290568434
fber5385.5390625
fdmean0.26956361731474937
fdnum127
fdperc59.06976744186046
fwhmavg1.4635385806588799
fwhmx1.595581090909091
fwhmy1.7758167272727274
fwhmz1.0192179237948216
gcor0.0142413
gsrx-0.03272540122270584
gsry0.07716580480337143
sizet215
sizex64
sizey64
sizez15
snr3.9998803843983706
spacingtr2.5
spacingx3.4375
spacingy3.4375
spacingz7.800000190734863
summarybgk55.703071242432785
summarybgmad25.59194296812721
summarybgmean153.9297332763672
summarybgmedian38.520912170410156
summarybgn33402.0
summarybgp0516.434973526000977
summarybgp95688.6980743408201
summarybgstdv367.5592346191406
summaryfgk12.148832781491443
summaryfgmad476.6233126137838
summaryfgmean2955.673583984375
summaryfgmedian2812.0498046875
summaryfgn9640.0
summaryfgp052192.794140625
summaryfgp954058.456652832031
summaryfgstdv702.9970092773438
tsnr35.48956298828125
AcquisitionMatrixPE64
AcquisitionNumber1
AcquisitionTime10:35:34.162500
BandwidthPerPixelPhaseEncode85.227
BaseResolution64
BodyPartExaminedBRAIN
CoilCombinationMethodSum of Squares
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20211006
Dcm2bidsVersion2.1.6
DerivedVendorReportedEchoSpacing0.000550002
DeviceSerialNumber66073
DwellTime3.5e-06
EchoTime0.09
EchoTrainLength21
EffectiveEchoSpacing0.000183334
FlipAngle90
FrameTimesStart[0, 0.1475, 0.3, 0.45, 0.6, 0.75, 0.9, 1.05, 1.2, 1.35, 1.5, 1.65, 1.8, 1.95, 2.1, 2.25, 2.4, 2.55, 2.7, 2.85, 3, 3.15, 3.3, 3.45, 3.6, 3.75, 3.9, 4.05, 4.2, 4.35, 4.5, 4.65, 4.8, 4.95, 5.1, 5.25, 5.4, 5.55, 5.7, 5.85, 6, 6.15, 6.3, 6.45, 6.6025, 6.7525, 6.9025, 7.0525, 7.2025, 7.3525, 7.5025, 7.6525, 7.8025, 7.9525, 8.1025, 8.2525, 8.4025, 8.5525, 8.7025, 8.8525, 9.1175, 9.2675, 9.4175, 9.5675, 9.7175, 9.8675, 10.0175, 10.1675, 10.3175, 10.4675, 10.6175, 10.7675, 10.9175, 11.0675, 11.2175, 11.3675, 11.5175, 11.6675, 11.8175, 11.9675, 12.1175, 12.2675, 12.4175, 12.5675, 12.7175, 12.8675, 13.0175, 13.1675, 13.3175, 13.47, 13.62, 13.77, 13.92, 14.07, 14.22, 14.37, 14.52, 14.67, 14.82, 14.97, 15.12, 15.27, 15.42, 15.57, 15.72, 15.87, 16.02, 16.17, 16.32, 16.47, 16.62, 16.77, 16.92, 17.07, 17.22, 17.37, 17.52, 17.67, 17.82, 17.97, 18.235, 18.385, 18.535, 18.685, 18.835, 18.985, 19.135, 19.285, 19.435, 19.585, 19.735, 19.885, 20.035, 20.185, 20.3375, 20.4875, 20.6375, 20.7875, 20.9375, 21.0875, 21.2375, 21.3875, 21.5375, 21.6875, 21.8375, 21.9875, 22.1375, 22.2875, 22.4375, 22.5875, 22.7375, 22.8875, 23.0375, 23.1875, 23.3375, 23.4875, 23.6375, 23.7875, 23.9375, 24.0875, 24.2375, 24.3875, 24.5375, 24.6875, 24.8375, 24.9875, 25.1375, 25.2875, 25.4375, 25.5875, 25.7375, 25.8875, 26.0375, 26.1875, 26.3375, 26.4875, 26.64, 26.79, 26.94, 27.09, 27.355, 27.505, 27.655, 27.805, 27.955, 28.105, 28.255, 28.405, 28.555, 28.705, 28.855, 29.005, 29.155, 29.305, 29.455, 29.605, 29.755, 29.905, 30.055, 30.205, 30.355, 30.505, 30.655, 30.805, 30.955, 31.105, 31.255, 31.405, 31.555, 31.705, 31.855, 32.005, 32.155, 32.305, 32.455]
ImageOrientationPatientDICOM[1, 0, 0, 0, 1, 0]
ImageOrientationTextTra
ImageType['ORIGINAL', 'PRIMARY', 'M', 'ND', 'NORM', 'MOSAIC']
ImagingFrequency123.254
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressMaindy Road *,CARDIFF-Note:body18, flex Coils and interface in Co
InstitutionNameCUBRIC
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma
MatrixCoilModeGRAPPA
ModalityMR
ParallelReductionFactorInPlane3
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps63
PhaseResolution1
PixelBandwidth2230
ProcedureStepDescription3TWproj^314_WAND
ProtocolNamemg_ep2d_se_CBV_VE11c
PulseSequenceDetails%CustomerSeq%\mg_ep2d_se_VE11c
PulseSequenceTypeSpin Echo EPI
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE64
RefLinesPE36
RepetitionTime2.5
SAR0.0908698
ScanOptionsFS
ScanningSequenceEP
SequenceNameepse2d1_64
SequenceVariantSK\SP
SeriesDescriptionmg_ep2d_se_CBV_VE11c
SeriesNumber18
ShimSetting[9830, 50, -2672, 521, 114, -64, -58, 25]
SliceThickness6.5
SliceTiming[0, 1.335, 0.1675, 1.5, 0.335, 1.6675, 0.5, 1.835, 0.6675, 2, 0.835, 2.1675, 1, 2.335, 1.1675]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices7.8
SpoilingStateTrue
StationNameAWP66073
TaskNamebreathhold
TotalReadoutTime0.01155
TxRefAmp230.828
md5sum611e0b4baa688d6b250733f8b0985065
softwaremriqc
version22.0.0rc1
Rate Image
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.