MRIQC: individual bold report

Summary

  • BIDS filename: sub-64927_ses-07_task-breathhold_bold.
  • Date and time: 2023-10-19, 01:54.
  • MRIQC version: 22.0.0rc1.
  • Workflow details:
    • Framewise Displacement was computed using 3dvolreg (AFNI)
    • Framewise Displacement threshold was defined at 0.200000 mm

Visual reports

BOLD average
2023-10-19T01:45:45.168241 image/svg+xml Matplotlib v3.5.1, https://matplotlib.org/
Standard deviation map
2023-10-19T01:45:47.196392 image/svg+xml Matplotlib v3.5.1, https://matplotlib.org/
FMRI summary plot
2023-10-19T01:54:31.657658 image/svg+xml Matplotlib v3.5.1, https://matplotlib.org/

Other

aor0.0075770588235294116
aqi0.016439842268907566
dummy_trs1
dvarsnstd50.328485786666654
dvarsstd1.651538218860758
dvarsvstd1.0719564804219415
efc0.498894854050331
fber6525.62841796875
fdmean0.18848266275575648
fdnum77
fdperc32.35294117647059
fwhmavg1.4625578840829794
fwhmx1.581696
fwhmy1.7397469090909092
fwhmz1.0662307431580287
gcor0.016761
gsrx-0.016750456765294075
gsry0.04560898244380951
sizet238
sizex64
sizey64
sizez15
snr4.19586604427776
spacingtr2.5
spacingx3.4375
spacingy3.4375
spacingz7.800000190734863
summarybgk72.19967136984187
summarybgmad22.604877919295486
summarybgmean107.8968505859375
summarybgmedian36.49197006225586
summarybgn31548.0
summarybgp0516.550604248046877
summarybgp95488.50557250976556
summarybgstdv205.01622009277344
summaryfgk18.231740322669467
summaryfgmad493.943986773923
summaryfgmean3085.045654296875
summaryfgmedian2947.30126953125
summaryfgn10626.0
summaryfgp052312.5051879882812
summaryfgp954254.3028564453125
summaryfgstdv702.396728515625
tsnr41.80329895019531
AcquisitionMatrixPE64
AcquisitionNumber1
AcquisitionTime11:15:47.122500
BandwidthPerPixelPhaseEncode85.227
BaseResolution64
BodyPartExaminedBRAIN
CoilCombinationMethodSum of Squares
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20211006
Dcm2bidsVersion2.1.6
DerivedVendorReportedEchoSpacing0.000550002
DeviceSerialNumber66073
DwellTime3.5e-06
EchoTime0.09
EchoTrainLength21
EffectiveEchoSpacing0.000183334
FlipAngle90
FrameTimesStart[0, 0.15, 0.3, 0.45, 0.6, 0.75, 0.9, 1.05, 1.2, 1.35, 1.5, 1.65, 1.8, 1.9525, 2.1025, 2.2525, 2.4025, 2.5525, 2.7025, 2.8525, 3.0025, 3.1525, 3.3025, 3.4525, 3.6025, 3.7525, 3.9025, 4.0525, 4.2025, 4.3525, 4.5025, 4.6525, 4.8025, 4.9525, 5.1025, 5.2525, 5.4025, 5.5525, 5.7025, 5.8525, 6.0025, 6.1525, 6.3025, 6.4525, 6.6025, 6.7525, 6.9025, 7.0525, 7.2025, 7.3525, 7.5025, 7.6525, 7.8025, 7.9525, 8.1025, 8.255, 8.405, 8.555, 8.705, 8.855, 9.12, 9.27, 9.42, 9.57, 9.72, 9.87, 10.02, 10.17, 10.32, 10.47, 10.62, 10.77, 10.92, 11.07, 11.22, 11.37, 11.52, 11.67, 11.82, 11.97, 12.12, 12.27, 12.42, 12.57, 12.72, 12.87, 13.02, 13.17, 13.32, 13.47, 13.62, 13.77, 13.92, 14.07, 14.22, 14.37, 14.52, 14.67, 14.82, 14.97, 15.1225, 15.2725, 15.4225, 15.5725, 15.7225, 15.8725, 16.0225, 16.1725, 16.3225, 16.4725, 16.6225, 16.7725, 16.9225, 17.0725, 17.2225, 17.3725, 17.5225, 17.6725, 17.8225, 17.9725, 18.2375, 18.3875, 18.5375, 18.6875, 18.8375, 18.9875, 19.1375, 19.2875, 19.4375, 19.5875, 19.7375, 19.8875, 20.0375, 20.1875, 20.3375, 20.4875, 20.6375, 20.7875, 20.9375, 21.0875, 21.2375, 21.3875, 21.5375, 21.6875, 21.8375, 21.99, 22.14, 22.29, 22.44, 22.59, 22.74, 22.89, 23.04, 23.19, 23.34, 23.49, 23.64, 23.79, 23.94, 24.09, 24.24, 24.39, 24.54, 24.69, 24.84, 24.99, 25.14, 25.29, 25.44, 25.59, 25.74, 25.89, 26.04, 26.19, 26.34, 26.49, 26.64, 26.79, 26.94, 27.09, 27.355, 27.505, 27.655, 27.805, 27.955, 28.105, 28.255, 28.405, 28.555, 28.705, 28.8575, 29.0075, 29.1575, 29.3075, 29.4575, 29.6075, 29.7575, 29.9075, 30.0575, 30.2075, 30.3575, 30.5075, 30.6575, 30.8075, 30.9575, 31.1075, 31.2575, 31.4075, 31.5575, 31.7075, 31.8575, 32.0075, 32.1575, 32.3075, 32.4575, 32.6075, 32.7575, 32.9075, 33.0575, 33.2075, 33.3575, 33.5075, 33.6575, 33.8075, 33.9575, 34.1075, 34.2575, 34.4075, 34.5575, 34.7075, 34.8575, 35.0075, 35.16, 35.31, 35.46, 35.61, 35.76, 35.91, 36.06]
ImageOrientationPatientDICOM[1, 0, 0, 0, 1, 0]
ImageOrientationTextTra
ImageType['ORIGINAL', 'PRIMARY', 'M', 'ND', 'NORM', 'MOSAIC']
ImagingFrequency123.254
InPlanePhaseEncodingDirectionDICOMCOL
InstitutionAddressMaindy Road *,CARDIFF-Note:body18 in Connectome,Wales,GB,CF24 4HQ
InstitutionNameCUBRIC
InstitutionalDepartmentNameDepartment
MRAcquisitionType2D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma
MatrixCoilModeGRAPPA
ModalityMR
ParallelReductionFactorInPlane3
PartialFourier1
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingDirectionj-
PhaseEncodingSteps63
PhaseResolution1
PixelBandwidth2230
ProcedureStepDescription3TWproj^314_WAND
ProtocolNamemg_ep2d_se_CBV_VE11c_BHold
PulseSequenceDetails%CustomerSeq%\mg_ep2d_se_VE11c
PulseSequenceTypeSpin Echo EPI
ReceiveCoilActiveElementsHEA;HEP
ReceiveCoilNameHead_32
ReconMatrixPE64
RefLinesPE36
RepetitionTime2.5
SAR0.0850302
ScanOptionsFS
ScanningSequenceEP
SequenceNameepse2d1_64
SequenceVariantSK\SP
SeriesDescriptionmg_ep2d_se_CBV_VE11c_BHold
SeriesNumber18
ShimSetting[9794, 62, -2649, 519, -3, 185, -13, 35]
SliceThickness6.5
SliceTiming[0, 1.3325, 0.1675, 1.5, 0.3325, 1.6675, 0.5, 1.8325, 0.6675, 2, 0.8325, 2.1675, 1, 2.3325, 1.1675]
SoftwareVersionssyngo MR E11
SpacingBetweenSlices7.8
SpoilingStateTrue
StationNameAWP66073
TaskNamebreathhold
TotalReadoutTime0.01155
TxRefAmp219.335
md5sum63764d4ef319d380b5ac90ff0bcf1cc0
softwaremriqc
version22.0.0rc1
Rate Image
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.